RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 SIX6O95475 246 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 TRAPPC2P0DI81 140 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 TRAPPC2BP0DI82 140 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 RPL15P61313 204 aaKnown RBP13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 UBA52P62987 128 aaKnown RBP13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 ZNF562Q6V9R5 426 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 ZBTB8BQ8NAP8 495 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 OR4D5Q8NGN0 318 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 CHAC2Q8WUX2 184 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 C2orf50Q96LR7 162 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 CLCC1Q96S66 551 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 FKBP11Q9NYL4 201 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 ZNF257Q9Y2Q1 563 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 IGHV7-81A0A0B4J1V7 117 aa13.14□□□□□ -0.31
CCDC90B-202ENST00000455220 TCF21O43680 179 aa13.14□□□□□ -0.31
CCDC90B-202ENST00000455220 COMPP49747 757 aaPredicted RBP13.14□□□□□ -0.31
CCDC90B-202ENST00000455220 SRSF4Q08170 494 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-202ENST00000455220 IL15RAQ13261 267 aa13.14□□□□□ -0.31
CCDC90B-202ENST00000455220 PDLIM3Q53GG5 364 aaPredicted RBP13.14□□□□□ -0.31
CCDC90B-202ENST00000455220 OR5B3Q8NH48 314 aa13.14□□□□□ -0.31
CCDC90B-202ENST00000455220 OR52E5Q8NH55 327 aa13.14□□□□□ -0.31
CCDC90B-202ENST00000455220 QTRT1Q9BXR0 403 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-202ENST00000455220 OR51B2Q9Y5P1 312 aa13.14□□□□□ -0.31
CCDC90B-202ENST00000455220 NF1P21359 2839 aa13.14□□□□□ -0.31
CCDC90B-202ENST00000455220 ST8SIA3O43173 380 aa13.13□□□□□ -0.31
CCDC90B-202ENST00000455220 RBMXL2O75526 392 aaKnown RBP13.13□□□□□ -0.31
CCDC90B-202ENST00000455220 MYOD1P15172 320 aa13.13□□□□□ -0.31
CCDC90B-202ENST00000455220 BCAP31P51572 246 aa13.13□□□□□ -0.31
CCDC90B-202ENST00000455220 BLCAPP62952 87 aa13.13□□□□□ -0.31
CCDC90B-202ENST00000455220 CX3CL1P78423 397 aa13.13□□□□□ -0.31
CCDC90B-202ENST00000455220 TNXAQ16473 311 aa13.13□□□□□ -0.31
CCDC90B-202ENST00000455220 OR1S1Q8NH92 325 aa13.13□□□□□ -0.31
CCDC90B-202ENST00000455220 HSPB9Q9BQS6 159 aa13.13□□□□□ -0.31
CCDC90B-202ENST00000455220 NMES1Q9C002 83 aa13.13□□□□□ -0.31
CCDC90B-202ENST00000455220 COMMD5Q9GZQ3 224 aa13.13□□□□□ -0.31
CCDC90B-202ENST00000455220 NPFFR1Q9GZQ6 430 aa13.13□□□□□ -0.31
CCDC90B-202ENST00000455220 CACFD1Q9UGQ2 172 aa13.13□□□□□ -0.31
CCDC90B-202ENST00000455220 SETD2Q9BYW2 2564 aaPredicted RBP13.13□□□□□ -0.31
CCDC90B-202ENST00000455220 TEX50A0A1B0GTY4 177 aa13.12□□□□□ -0.31
CCDC90B-202ENST00000455220 SH2D7A6NKC9 451 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-202ENST00000455220 FAM90A26D6RGX4 464 aa13.12□□□□□ -0.31
CCDC90B-202ENST00000455220 ACTL6BO94805 426 aa13.12□□□□□ -0.31
CCDC90B-202ENST00000455220 IGHG2P01859 326 aa13.12□□□□□ -0.31
CCDC90B-202ENST00000455220 HSPE1P61604 102 aaKnown RBP13.12□□□□□ -0.31
CCDC90B-202ENST00000455220 NDPQ00604 133 aa13.12□□□□□ -0.31
CCDC90B-202ENST00000455220 C10orf55Q5SWW7 151 aa13.12□□□□□ -0.31
CCDC90B-202ENST00000455220 PDCD10Q9BUL8 212 aa13.12□□□□□ -0.31
CCDC90B-202ENST00000455220 HSPB7Q9UBY9 170 aa13.12□□□□□ -0.31
CCDC90B-202ENST00000455220 FAM181BA6NEQ2 426 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 CGB1A6NKQ9 187 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 E7EUB6 86 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 TRIM77I1YAP6 450 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 RPL27AP46776 148 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 GNB1P62873 340 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 CYCSP99999 105 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 ID3Q02535 119 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 FXYD3Q14802 87 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 OR1L8Q8NGR8 309 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 SRSF12Q8WXF0 261 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 ASB13Q8WXK3 278 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 FYTTD1Q96QD9 318 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 ZNF436Q9C0F3 470 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 NDUFA4L2Q9NRX3 87 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 GSKIPQ9P0R6 139 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 JMJD1CQ15652 2540 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 A0A1B0GW64 132 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 GIPP09681 153 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 SPCS3P61009 180 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 PRCDQ00LT1 54 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 TNFRSF9Q07011 255 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 CXorf66Q5JRM2 361 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 Q6ZS46 218 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 Q8N2B8 174 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 ARPC1AQ92747 370 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 WDR89Q96FK6 387 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 ZNF702PQ9H963 129 aa13.11□□□□□ -0.31
CCDC90B-202ENST00000455220 TEX22C9J3V5 150 aa13.1□□□□□ -0.31
CCDC90B-202ENST00000455220 KCNAB3O43448 404 aa13.1□□□□□ -0.31
CCDC90B-202ENST00000455220 CNIH1O95406 144 aa13.1□□□□□ -0.31
CCDC90B-202ENST00000455220 IFNA17P01571 189 aa13.1□□□□□ -0.31
CCDC90B-202ENST00000455220 OPN1MWP04001 364 aa13.1□□□□□ -0.31
CCDC90B-202ENST00000455220 OPN1MW2P0DN77 364 aa13.1□□□□□ -0.31
CCDC90B-202ENST00000455220 OPN1MW3P0DN78 364 aa13.1□□□□□ -0.31
CCDC90B-202ENST00000455220 EGR2P11161 476 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-202ENST00000455220 NKX2-1P43699 371 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-202ENST00000455220 PRSS22Q9GZN4 317 aa13.1□□□□□ -0.31
CCDC90B-202ENST00000455220 FBXO7Q9Y3I1 522 aa13.1□□□□□ -0.31
CCDC90B-202ENST00000455220 LINC01548A6NM66 108 aa13.09□□□□□ -0.31
CCDC90B-202ENST00000455220 MBPP02686 304 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-202ENST00000455220 CRIP2P52943 208 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-202ENST00000455220 C9orf152Q5JTZ5 239 aa13.09□□□□□ -0.31
CCDC90B-202ENST00000455220 SLC35E3Q7Z769 313 aa13.09□□□□□ -0.31
CCDC90B-202ENST00000455220 SRSF8Q9BRL6 282 aaKnown RBP13.09□□□□□ -0.31
CCDC90B-202ENST00000455220 ZNF580Q9UK33 172 aa13.09□□□□□ -0.31
CCDC90B-202ENST00000455220 INS-IGF2F8WCM5 200 aa13.08□□□□□ -0.32
CCDC90B-202ENST00000455220 ATP6V0E1O15342 81 aa13.08□□□□□ -0.32
CCDC90B-202ENST00000455220 TSPAN9O75954 239 aa13.08□□□□□ -0.32
CCDC90B-202ENST00000455220 NXPH3O95157 252 aa13.08□□□□□ -0.32
CCDC90B-202ENST00000455220 IGF1P05019 195 aa13.08□□□□□ -0.32
CCDC90B-202ENST00000455220 SGMS2Q8NHU3 365 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms