RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CCL17Q92583 94 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 ATP5SQ99766 215 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 GLS2Q9UI32 602 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 PLECQ15149 4684 aaKnown RBP3.91□□□□□ -1.78
RIF1-207ENST00000454583 LRRK2Q5S007 2527 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 HECTD4Q9Y4D8 3996 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 OOSP1A8MZH6 123 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 TOR1AO14656 332 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 TMPRSS2O15393 492 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 IGLV1-40P01703 118 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 LIPFP07098 398 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 TNFSF4P23510 183 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 GLP1RP43220 463 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 IER3P46695 156 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 FHITP49789 147 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 SULT1A1P50225 295 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 RAB5CP51148 216 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 POLR2GP62487 172 aaKnown RBP eCLIP3.91□□□□□ -1.78
RIF1-207ENST00000454583 NDPQ00604 133 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 CASTOR1Q8WTX7 329 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 FAM168AQ92567 244 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 RAB1CQ92928 201 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 RNF5Q99942 180 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 VSIRQ9H7M9 311 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 NDUFA4L2Q9NRX3 87 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 BET1LQ9NYM9 111 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 FAM96BQ9Y3D0 163 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 USF3Q68DE3 2245 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 TRAV3A0A0B4J244 114 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 TRAV20A0A0B4J274 112 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 A1L4Q6 167 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 S1PR2O95136 353 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 VENTXO95231 258 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 HOXB5P09067 269 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 FCGR2BP31994 310 aaPredicted RBP3.91□□□□□ -1.78
RIF1-207ENST00000454583 HAGHQ16775 308 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 FAM120AOSQ5T036 256 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 C5orf56Q8N8D9 126 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 OR10J5Q8NHC4 309 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 THAP6Q8TBB0 222 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 WDR61Q9GZS3 305 aaKnown RBP3.91□□□□□ -1.78
RIF1-207ENST00000454583 RBKSQ9H477 322 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 C16orf95Q9H693 158 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 COMMD9Q9P000 198 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 PKD1L1Q8TDX9 2849 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 KANTRA0A1W2PQU2 76 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 IGLC7A0M8Q6 106 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 ST8SIA3O43173 380 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 YIF1AO95070 293 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 IGF1P05019 195 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 USF1P22415 310 aaPredicted RBP3.9□□□□□ -1.78
RIF1-207ENST00000454583 ATP6V0CP27449 155 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 CD1BP29016 333 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 NPBWR1P48145 328 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 F2RL1P55085 397 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 BPIFB3P59826 476 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 RPL31P62899 125 aaKnown RBP3.9□□□□□ -1.78
RIF1-207ENST00000454583 KLRD1Q13241 179 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 CLEC9AQ6UXN8 241 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 TMEM182Q6ZP80 229 aaPredicted RBP3.9□□□□□ -1.78
RIF1-207ENST00000454583 LINC01356Q8N9X3 169 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 TMEM167AQ8TBQ9 72 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 TMED6Q8WW62 240 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 PYGO2Q9BRQ0 406 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 PIMREGQ9BSJ6 248 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 ZFP57Q9NU63 452 aa3.9□□□□□ -1.78
RIF1-207ENST00000454583 FAT2Q9NYQ8 4349 aa3.9□□□□□ -1.79
RIF1-207ENST00000454583 IGKV1D-37A0A075B6S9 117 aa3.9□□□□□ -1.79
RIF1-207ENST00000454583 IGHV1-69DA0A0B4J2H0 117 aa3.9□□□□□ -1.79
RIF1-207ENST00000454583 FAM24AA6NFZ4 105 aa3.9□□□□□ -1.79
RIF1-207ENST00000454583 IGHV1-69P01742 117 aa3.9□□□□□ -1.79
RIF1-207ENST00000454583 SRP19P09132 144 aaKnown RBP3.9□□□□□ -1.79
RIF1-207ENST00000454583 CNTFRP26992 372 aa3.9□□□□□ -1.79
RIF1-207ENST00000454583 CEACAM6P40199 344 aa3.9□□□□□ -1.79
RIF1-207ENST00000454583 ZNF575Q86XF7 245 aa3.9□□□□□ -1.79
RIF1-207ENST00000454583 C1QL4Q86Z23 238 aa3.9□□□□□ -1.79
RIF1-207ENST00000454583 LEAP2Q969E1 77 aa3.9□□□□□ -1.79
RIF1-207ENST00000454583 GALMQ96C23 342 aa3.9□□□□□ -1.79
RIF1-207ENST00000454583 ZNF503Q96F45 646 aa3.9□□□□□ -1.79
RIF1-207ENST00000454583 RAB40CQ96S21 281 aa3.9□□□□□ -1.79
RIF1-207ENST00000454583 HSD17B10Q99714 261 aaKnown RBP3.9□□□□□ -1.79
RIF1-207ENST00000454583 MRPL20Q9BYC9 149 aaKnown RBP3.9□□□□□ -1.79
RIF1-207ENST00000454583 STRAPQ9Y3F4 350 aaKnown RBP3.9□□□□□ -1.79
RIF1-207ENST00000454583 ALMS1Q8TCU4 4167 aa3.9□□□□□ -1.79
RIF1-207ENST00000454583 LOC105371242A0A075B767 164 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 A0A087WWC5 75 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 LOC102723971A0A1B0GUV8 181 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 hADV38S2A0JD32 116 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 C15orf61A6NNL5 157 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 LINC00869P0C866 280 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 CTRB1P17538 263 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 NPPCP23582 126 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 MYCNOSP40205 109 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 RND2P52198 227 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 OR2B8PP59922 312 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 IZUMO4Q1ZYL8 232 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 CTRB2Q6GPI1 263 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 ACSM6Q6P461 480 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 OR8B3Q8NGG8 313 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 OR4A5Q8NH83 315 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms