RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ZNF818PQ6ZRF7 136 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 OR51H1Q8NH63 302 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 CD300LFQ8TDQ1 290 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 RBM38Q9H0Z9 239 aaKnown RBP9.8□□□□□ -0.84
CHD3-206ENST00000452447 A8MZ25 164 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 PPP5D1E7EU14 171 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 GGCTO75223 188 aaKnown RBP9.8□□□□□ -0.84
CHD3-206ENST00000452447 CRYGCP07315 174 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 AREGP15514 252 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 RFX2P48378 723 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 TAS2R20P59543 309 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 C19orf35Q6ZS72 473 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 DMBX1Q8NFW5 382 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 OR2K2Q8NGT1 345 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 DYNLRB2Q8TF09 96 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 COMMD5Q9GZQ3 224 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 TUBA4BQ9H853 241 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 A0A1B0GW64 132 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 HLA-AP01891 365 aaKnown RBP9.79□□□□□ -0.84
CHD3-206ENST00000452447 REG1AP05451 166 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 MYOD1P15172 320 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 HIST1H1BP16401 226 aaKnown RBP9.79□□□□□ -0.84
CHD3-206ENST00000452447 CTRB1P17538 263 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 GNRHRP30968 328 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 PRSS3P35030 304 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 RORCP51449 518 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 TAS2R46P59540 309 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 NCS1P62166 190 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 CTRB2Q6GPI1 263 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 DHRS11Q6UWP2 260 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 CLEC19AQ6UXS0 136 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 OR5H2Q8NGV7 314 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 SLC25A46Q96AG3 418 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 EEF1AKMT3Q96AZ1 226 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 FANCD2OSQ96PS1 177 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 ZNF2Q9BSG1 426 aaPredicted RBP9.79□□□□□ -0.84
CHD3-206ENST00000452447 PLEKHA2Q9HB19 425 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 C19orf73Q9NVV2 129 aa9.79□□□□□ -0.84
CHD3-206ENST00000452447 IZUMO1RA6ND01 250 aa9.78□□□□□ -0.84
CHD3-206ENST00000452447 NDUFB8O95169 186 aa9.78□□□□□ -0.84
CHD3-206ENST00000452447 OR2C1O95371 312 aa9.78□□□□□ -0.84
CHD3-206ENST00000452447 IGHV3-23P01764 117 aa9.78□□□□□ -0.84
CHD3-206ENST00000452447 PMP2P02689 132 aa9.78□□□□□ -0.84
CHD3-206ENST00000452447 ARL3P36405 182 aa9.78□□□□□ -0.84
CHD3-206ENST00000452447 OR2B8PP59922 312 aa9.78□□□□□ -0.84
CHD3-206ENST00000452447 CMTM1Q8IZ96 169 aa9.78□□□□□ -0.84
CHD3-206ENST00000452447 OR6F1Q8NGZ6 308 aa9.78□□□□□ -0.84
CHD3-206ENST00000452447 MUC7Q8TAX7 377 aa9.78□□□□□ -0.84
CHD3-206ENST00000452447 TM2D3Q9BRN9 247 aa9.78□□□□□ -0.84
CHD3-206ENST00000452447 NAA50Q9GZZ1 169 aaKnown RBP9.78□□□□□ -0.84
CHD3-206ENST00000452447 TMEM140Q9NV12 185 aa9.78□□□□□ -0.84
CHD3-206ENST00000452447 TRAV3A0A0B4J244 114 aa9.77□□□□□ -0.85
CHD3-206ENST00000452447 UPK2O00526 184 aa9.77□□□□□ -0.85
CHD3-206ENST00000452447 S1PR2O95136 353 aa9.77□□□□□ -0.85
CHD3-206ENST00000452447 RLN1P04808 185 aa9.77□□□□□ -0.85
CHD3-206ENST00000452447 ERVK-16P61578 105 aa9.77□□□□□ -0.85
CHD3-206ENST00000452447 POU2AF1Q16633 256 aa9.77□□□□□ -0.85
CHD3-206ENST00000452447 CD300EQ496F6 205 aaPredicted RBP9.77□□□□□ -0.85
CHD3-206ENST00000452447 MZT2AQ6P582 158 aa9.77□□□□□ -0.85
CHD3-206ENST00000452447 MOB3AQ96BX8 217 aa9.77□□□□□ -0.85
CHD3-206ENST00000452447 CXorf58Q96LI9 332 aa9.77□□□□□ -0.85
CHD3-206ENST00000452447 SLC2A8Q9NY64 477 aa9.77□□□□□ -0.85
CHD3-206ENST00000452447 COMMD9Q9P000 198 aa9.77□□□□□ -0.85
CHD3-206ENST00000452447 THYN1Q9P016 225 aa9.77□□□□□ -0.85
CHD3-206ENST00000452447 CCDC59Q9P031 241 aaKnown RBP9.77□□□□□ -0.85
CHD3-206ENST00000452447 COMMD3Q9UBI1 195 aa9.77□□□□□ -0.85
CHD3-206ENST00000452447 S4R3C0 116 aa9.77□□□□□ -0.85
CHD3-206ENST00000452447 IGLV11-55A0A075B6I3 123 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 TRBV7-1A0A0A6YYK4 115 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 ZNF320A2RRD8 509 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 C2orf70A6NJV1 201 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 LGALS9O00182 355 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 CYB5BO43169 146 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 FOLR2P14207 255 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 RPA2P15927 270 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 NAT1P18440 290 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 F2RP25116 425 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 MECP2P51608 486 aaKnown RBP9.76□□□□□ -0.85
CHD3-206ENST00000452447 FAM106AQ4KMX7 169 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 GPHB5Q86YW7 130 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 LAX1Q8IWV1 398 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 CCDC140Q96MF4 163 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 SRSF8Q9BRL6 282 aaKnown RBP9.76□□□□□ -0.85
CHD3-206ENST00000452447 THAP7Q9BT49 309 aaPredicted RBP9.76□□□□□ -0.85
CHD3-206ENST00000452447 QTRT1Q9BXR0 403 aaKnown RBP9.76□□□□□ -0.85
CHD3-206ENST00000452447 ANAPC10Q9UM13 185 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 DMRT1Q9Y5R6 373 aa9.76□□□□□ -0.85
CHD3-206ENST00000452447 DYNC2H1Q8NCM8 4307 aaKnown RBP9.76□□□□□ -0.85
CHD3-206ENST00000452447 CGB1A6NKQ9 187 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 MARCH11A6NNE9 402 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 PGLYRP1O75594 196 aaPredicted RBP9.75□□□□□ -0.85
CHD3-206ENST00000452447 TPPPO94811 219 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 APOA1P02647 267 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 CLEC3BP05452 202 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 EIF4EP06730 217 aaKnown RBP9.75□□□□□ -0.85
CHD3-206ENST00000452447 FGF2P09038 288 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 ZNF182P17025 639 aaPredicted RBP9.75□□□□□ -0.85
CHD3-206ENST00000452447 HLA-DMAP28067 261 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 HRH1P35367 487 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 CD81P60033 236 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms