RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 GNG2P59768 71 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 C19orf35Q6ZS72 473 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 NR2C2APQ86WQ0 139 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 NUDCD2Q8WVJ2 157 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 NRG4Q8WWG1 115 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 BET1LQ9NYM9 111 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 TAS2R8Q9NYW2 309 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 ZNF320A2RRD8 509 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 NUPR2A6NF83 97 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 TMEM235A6NFC5 223 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 NOTOA8MTQ0 251 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 RBFOX2O43251 390 aaKnown RBP eCLIP8.14□□□□□ -1.11
USP1-204ENST00000452143 IGHV3-23P01764 117 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 HLA-GP17693 338 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 HSPA13P48723 471 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 ELLP55199 621 aaPredicted RBP8.14□□□□□ -1.11
USP1-204ENST00000452143 BRWD1-AS2P59051 145 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 TIMM50Q3ZCQ8 353 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 C22orf42Q6IC83 251 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 BTNL8Q6UX41 500 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 WFDC3Q8IUB2 231 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 MFSD4AQ8N468 514 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 UXS1Q8NBZ7 420 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 OR1L6Q8NGR2 347 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 SRSF8Q9BRL6 282 aaKnown RBP8.14□□□□□ -1.11
USP1-204ENST00000452143 OVOL2Q9BRP0 275 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 VCX3BQ9H321 246 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 THYN1Q9P016 225 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 MRPL27Q9P0M9 148 aaKnown RBP8.14□□□□□ -1.11
USP1-204ENST00000452143 TP53TG1Q9Y2A0 90 aa8.14□□□□□ -1.11
USP1-204ENST00000452143 MFSD2BA6NFX1 497 aa8.13□□□□□ -1.11
USP1-204ENST00000452143 CYB5BO43169 146 aa8.13□□□□□ -1.11
USP1-204ENST00000452143 SCAF4O95104 1147 aaKnown RBP8.13□□□□□ -1.11
USP1-204ENST00000452143 C8orf88P0DMB2 117 aa8.13□□□□□ -1.11
USP1-204ENST00000452143 MYOD1P15172 320 aa8.13□□□□□ -1.11
USP1-204ENST00000452143 ATF4P18848 351 aaPredicted RBP8.13□□□□□ -1.11
USP1-204ENST00000452143 FGF9P31371 208 aaPredicted RBP8.13□□□□□ -1.11
USP1-204ENST00000452143 BMI1P35226 326 aa8.13□□□□□ -1.11
USP1-204ENST00000452143 APOC4P55056 127 aa8.13□□□□□ -1.11
USP1-204ENST00000452143 TAS2R31P59538 309 aa8.13□□□□□ -1.11
USP1-204ENST00000452143 THOC7Q6I9Y2 204 aaKnown RBP8.13□□□□□ -1.11
USP1-204ENST00000452143 RBPMS2Q6ZRY4 209 aaKnown RBP8.13□□□□□ -1.11
USP1-204ENST00000452143 Q6ZWC4 215 aa8.13□□□□□ -1.11
USP1-204ENST00000452143 SSX9Q7RTT3 188 aa8.13□□□□□ -1.11
USP1-204ENST00000452143 ZBTB34Q8NCN2 500 aa8.13□□□□□ -1.11
USP1-204ENST00000452143 SPAG8Q99932 426 aaPredicted RBP8.13□□□□□ -1.11
USP1-204ENST00000452143 UFC1Q9Y3C8 167 aa8.13□□□□□ -1.11
USP1-204ENST00000452143 S4R3C0 116 aa8.13□□□□□ -1.11
USP1-204ENST00000452143 KMT2AQ03164 3969 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 IGLC7A0M8Q6 106 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 CXorf65A6NEN9 183 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 CGB1A6NKQ9 187 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 SSX5O60225 188 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 MRPS14O60783 128 aaKnown RBP8.12□□□□□ -1.11
USP1-204ENST00000452143 REG1AP05451 166 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 CLEC3BP05452 202 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 GPR183P32249 361 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 SCAND1P57086 179 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 OR2B8PP59922 312 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 ARPC4P59998 168 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 GABARAPL2P60520 117 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 TNFRSF9Q07011 255 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 CATR1Q13166 79 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 POU2AF1Q16633 256 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 TM4SF20Q53R12 229 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 UNQ9165/PRO28630Q6UXU0 137 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 TPRA1Q86W33 373 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 SLC38A6Q8IZM9 456 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 SPAG16Q8N0X2 631 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 Q8N3U1 123 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 OR2C3Q8N628 320 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 BEST4Q8NFU0 473 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 OR13F1Q8NGS4 319 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 ZNF502Q8TBZ5 544 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 LGALS14Q8TCE9 139 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 TMEM190Q8WZ59 177 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 ZNF436Q9C0F3 470 aaPredicted RBP8.12□□□□□ -1.11
USP1-204ENST00000452143 C5orf66Q9H5L9 145 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 HRASLSQ9HDD0 168 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 TXNL4BQ9NX01 149 aaKnown RBP8.12□□□□□ -1.11
USP1-204ENST00000452143 RHBDL2Q9NX52 303 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 DAPK2Q9UIK4 370 aa8.12□□□□□ -1.11
USP1-204ENST00000452143 SMIM30A4D0T7 59 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 UBE2CO00762 179 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 TNFSF12O43508 249 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 HPRT1P00492 218 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 PPYP01298 95 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 NQO2P16083 231 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 PTBP1P26599 531 aaKnown RBP eCLIP8.11□□□□□ -1.11
USP1-204ENST00000452143 FCGR2CP31995 323 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 ZNF585BQ52M93 769 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 UBE2UQ5VVX9 321 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 SFXN4Q6P4A7 337 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 PLET1Q6UQ28 207 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 HSD17B13Q7Z5P4 300 aaPredicted RBP8.11□□□□□ -1.11
USP1-204ENST00000452143 CD300LFQ8TDQ1 290 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 VN1R17PQ8TDU5 208 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 SECTM1Q8WVN6 248 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 BORCS5Q969J3 196 aa8.11□□□□□ -1.11
USP1-204ENST00000452143 CNBD2Q96M20 576 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms