RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 NUTF2P61970 127 aaKnown RBP5.47□□□□□ -1.53
LINC01961-201ENST00000449954 SNRPGP62308 76 aaKnown RBP5.47□□□□□ -1.53
LINC01961-201ENST00000449954 PPP3R1P63098 170 aa5.47□□□□□ -1.53
LINC01961-201ENST00000449954 ZNF85Q03923 595 aa5.47□□□□□ -1.53
LINC01961-201ENST00000449954 PLA2G7Q13093 441 aa5.47□□□□□ -1.53
LINC01961-201ENST00000449954 ATP6AP1Q15904 470 aa5.47□□□□□ -1.53
LINC01961-201ENST00000449954 FAM222AQ5U5X8 452 aa5.47□□□□□ -1.53
LINC01961-201ENST00000449954 Q6ZRN7 208 aaPredicted RBP5.47□□□□□ -1.53
LINC01961-201ENST00000449954 TMEM116Q8NCL8 245 aa5.47□□□□□ -1.53
LINC01961-201ENST00000449954 TAS2R4Q9NYW5 299 aa5.47□□□□□ -1.53
LINC01961-201ENST00000449954 RFNGQ9Y644 331 aa5.47□□□□□ -1.53
LINC01961-201ENST00000449954 ZNF705FA8MVS1 300 aaPredicted RBP5.46□□□□□ -1.54
LINC01961-201ENST00000449954 M0R129 80 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 SLC16A6O15403 523 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 ZNF207O43670 478 aaKnown RBP5.46□□□□□ -1.54
LINC01961-201ENST00000449954 BAG2O95816 211 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 CRYZL1O95825 349 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 FAM107AO95990 144 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 CD2P06729 351 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 ZNF735P0CB33 412 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 ZNF705DP0CH99 300 aaPredicted RBP5.46□□□□□ -1.54
LINC01961-201ENST00000449954 ZNF705BP0CI00 300 aaPredicted RBP5.46□□□□□ -1.54
LINC01961-201ENST00000449954 ASIPP42127 132 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 RPL27AP46776 148 aaKnown RBP5.46□□□□□ -1.54
LINC01961-201ENST00000449954 PSMD7P51665 324 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 EFNB1P98172 346 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 CLINT1Q14677 625 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 ZNF705AQ6ZN79 300 aaPredicted RBP5.46□□□□□ -1.54
LINC01961-201ENST00000449954 SSX7Q7RTT5 188 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 TCF24Q7RTU0 167 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 VN1R17PQ8TDU5 208 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 ST8SIA2Q92186 375 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 SRSF8Q9BRL6 282 aaKnown RBP5.46□□□□□ -1.54
LINC01961-201ENST00000449954 MS4A6AQ9H2W1 248 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 FGFR1OP2Q9NVK5 253 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 OR1A1Q9P1Q5 309 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 GHRLQ9UBU3 117 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 MGAT4AQ9UM21 535 aa5.46□□□□□ -1.54
LINC01961-201ENST00000449954 TNXBP22105 4242 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 RPS10-NUDT3A0A1W2PQS6 291 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 OR2T8A6NH00 312 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 CYB5BO43169 146 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 NUDT3O95989 172 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 CST1P01037 141 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 EIF4EP06730 217 aaKnown RBP5.45□□□□□ -1.54
LINC01961-201ENST00000449954 IL6RP08887 468 aaPredicted RBP5.45□□□□□ -1.54
LINC01961-201ENST00000449954 P0C879 139 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 AREGP15514 252 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 MGMTP16455 207 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 BDKRB2P30411 391 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 MAS1LP35410 378 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 LINC00315P59091 139 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 DAD1P61803 113 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 TMED1Q13445 227 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 UBE2UQ5VVX9 321 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 SIGIRRQ6IA17 410 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 ZNF880Q6PDB4 577 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 OR5AK2Q8NH90 309 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 VSTM2AQ8TAG5 236 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 CMTM5Q96DZ9 223 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 GRAMD2BQ96HH9 432 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 ZNF414Q96IQ9 312 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 ADTRPQ96IZ2 230 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 OR10C1Q96KK4 312 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 IL4I1Q96RQ9 567 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 UPK3BQ9BT76 320 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 SELENOIQ9C0D9 397 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 RIBC2Q9H4K1 309 aa5.45□□□□□ -1.54
LINC01961-201ENST00000449954 CHMP1AQ9HD42 196 aaPredicted RBP5.45□□□□□ -1.54
LINC01961-201ENST00000449954 IGHV3OR16-8A0A075B7F1 116 aa5.44□□□□□ -1.54
LINC01961-201ENST00000449954 NAPSAO96009 420 aa5.44□□□□□ -1.54
LINC01961-201ENST00000449954 HLA-DRB3P79483 266 aa5.44□□□□□ -1.54
LINC01961-201ENST00000449954 RELQ04864 619 aaPredicted RBP5.44□□□□□ -1.54
LINC01961-201ENST00000449954 FAM24BQ8N5W8 94 aa5.44□□□□□ -1.54
LINC01961-201ENST00000449954 DUSP18Q8NEJ0 188 aa5.44□□□□□ -1.54
LINC01961-201ENST00000449954 DGCR14Q96DF8 476 aaKnown RBP5.44□□□□□ -1.54
LINC01961-201ENST00000449954 MRPL48Q96GC5 212 aaKnown RBP5.44□□□□□ -1.54
LINC01961-201ENST00000449954 MYCBPQ99417 103 aaPredicted RBP5.44□□□□□ -1.54
LINC01961-201ENST00000449954 ZNF184Q99676 751 aaPredicted RBP5.44□□□□□ -1.54
LINC01961-201ENST00000449954 OR2D2Q9H210 308 aa5.44□□□□□ -1.54
LINC01961-201ENST00000449954 SDHAF2Q9NX18 166 aa5.44□□□□□ -1.54
LINC01961-201ENST00000449954 ZNF586Q9NXT0 402 aa5.44□□□□□ -1.54
LINC01961-201ENST00000449954 MUC2Q02817 5179 aa5.44□□□□□ -1.54
LINC01961-201ENST00000449954 TRAV14DV4A0A0A6YYC5 116 aa5.43□□□□□ -1.54
LINC01961-201ENST00000449954 DAPL1A0PJW8 107 aa5.43□□□□□ -1.54
LINC01961-201ENST00000449954 KNCNA6PVL3 124 aa5.43□□□□□ -1.54
LINC01961-201ENST00000449954 GNGT2O14610 69 aa5.43□□□□□ -1.54
LINC01961-201ENST00000449954 NUPL2O15504 423 aaKnown RBP5.43□□□□□ -1.54
LINC01961-201ENST00000449954 ST8SIA3O43173 380 aa5.43□□□□□ -1.54
LINC01961-201ENST00000449954 CRTAPO75718 401 aaPredicted RBP5.43□□□□□ -1.54
LINC01961-201ENST00000449954 KBTBD11O94819 623 aa5.43□□□□□ -1.54
LINC01961-201ENST00000449954 RAP2AP10114 183 aa5.43□□□□□ -1.54
LINC01961-201ENST00000449954 MRPL28Q13084 256 aaKnown RBP5.43□□□□□ -1.54
LINC01961-201ENST00000449954 ARFRP1Q13795 201 aa5.43□□□□□ -1.54
LINC01961-201ENST00000449954 SMN1Q16637 294 aaKnown RBP5.43□□□□□ -1.54
LINC01961-201ENST00000449954 ACTL10Q5JWF8 245 aa5.43□□□□□ -1.54
LINC01961-201ENST00000449954 TMEM69Q5SWH9 247 aa5.43□□□□□ -1.54
LINC01961-201ENST00000449954 GLIPR1L1Q6UWM5 242 aa5.43□□□□□ -1.54
LINC01961-201ENST00000449954 SETD6Q8TBK2 473 aa5.43□□□□□ -1.54
LINC01961-201ENST00000449954 RFKQ969G6 155 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms