RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TAF15Q92804 592 aaKnown RBP eCLIP8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 NARS2Q96I59 477 aaKnown RBP8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 LINC00052Q96N35 136 aa8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 PBDC1Q9BVG4 233 aa8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 OR51B2Q9Y5P1 312 aa8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 NBASA2RRP1 2371 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 C15orf62A8K5M9 175 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 PMS2P5A8MQ11 134 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 C17orf112F2Z3M2 114 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 IGKV1-16P04430 117 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 PF4V1P10720 104 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 LGALS7P47929 136 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 RUNX1Q01196 453 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 VWC2Q2TAL6 325 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 VMA21Q3ZAQ7 101 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 C1orf122Q6ZSJ8 110 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 CLRN3Q8NCR9 226 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 BPIFCQ8NFQ6 507 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 MS4A7Q9GZW8 240 aaPredicted RBP8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 TREM1Q9NP99 234 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 ZNRD1Q9P1U0 126 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 ONECUT1Q9UBC0 465 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 GCN1Q92616 2671 aaKnown RBP8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 TRAV3A0A0B4J244 114 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 UBE2L5PA0A1B0GUS4 154 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 TMEM218A2RU14 115 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 BUB1B-PAK6H3BSN5 160 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 MPDU1O75352 247 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 MBP02144 154 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 H2AFB1P0C5Y9 115 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 SAA1P0DJI8 122 aaPredicted RBP8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 SNCAP37840 140 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 DVL1P1P54792 670 aaPredicted RBP8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 RPS16P62249 146 aaKnown RBP8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 PRCDQ00LT1 54 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 PEA15Q15121 130 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 SPINK9Q5DT21 86 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 CENPVQ7Z7K6 275 aaPredicted RBP8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 KIR3DL3Q8N743 410 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 ZNF709Q8N972 641 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 TMEM167AQ8TBQ9 72 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 SMDT1Q9H4I9 107 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 PLEKHA3Q9HB20 300 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 FBXO7Q9Y3I1 522 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 INSIG2Q9Y5U4 225 aa8.58□□□□□ -1.04
VIPAS39-203ENST00000448935 ITPR1Q14643 2758 aa8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 ADGRG4Q8IZF6 3080 aa8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 ABCA4P78363 2273 aa8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 C22orf46C9J442 243 aa8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 RNASEK-C17orf49H0YIS7 233 aa8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 OVOL3O00110 214 aa8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 ENSAO43768 121 aaKnown RBP8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 CEACAM3P40198 252 aa8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 REG1BP48304 166 aa8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 RPL8P62917 257 aaKnown RBP8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 DLK1P80370 383 aa8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 ETV3LQ6ZN32 361 aa8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 SLC24A4Q8NFF2 622 aa8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 RPEQ96AT9 228 aa8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 RBMXL1Q96E39 390 aaKnown RBP8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 COMMD5Q9GZQ3 224 aa8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 NBEAQ8NFP9 2946 aa8.57□□□□□ -1.04
VIPAS39-203ENST00000448935 A0A1B0GW64 132 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 A0A1W2PN81 502 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 SRRM4A7MD48 611 aaKnown RBP8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 FNDC10F2Z333 226 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 C1QL1O75973 258 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 IFNA4P05014 189 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 CD5P06127 495 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 FGF7P21781 194 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 PRTN3P24158 256 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 NPY1RP25929 384 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 CD1BP29016 333 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 CHRNA7P36544 502 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 TMEM41BQ5BJD5 291 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 OR11H6Q8NGC7 330 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 OR1L8Q8NGR8 309 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 RNF5Q99942 180 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 RSG1Q9BU20 258 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 KCNIP2Q9NS61 270 aa8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 TET2Q6N021 2002 aaPredicted RBP8.56□□□□□ -1.04
VIPAS39-203ENST00000448935 TRAV1-1A0A0B4J248 108 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 IGHV1-3A0A0C4DH29 117 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 TEX50A0A1B0GTY4 177 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 INS-IGF2F8WCM5 200 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 FAM229AH3BQW9 127 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 APOC3P02656 99 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 COX7A1P24310 79 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 HTR1DP28221 377 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 FHITP49789 147 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 PDLIM4P50479 330 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 ERHP84090 104 aaKnown RBP8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 GUK1Q16774 197 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 PNKDQ8N490 385 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 TEX45Q8NA69 505 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 OR4P4Q8NGL7 312 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 HINT2Q9BX68 163 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 SEC11CQ9BY50 192 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 WDR83OSQ9Y284 106 aa8.55□□□□□ -1.04
VIPAS39-203ENST00000448935 KPTNQ9Y664 436 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms