RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 OR5M8Q8NGP6 311 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 OR4S2Q8NH73 311 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 FLYWCH2Q96CP2 140 aaKnown RBP10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 RAX2Q96IS3 184 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 HARBI1Q96MB7 349 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 RASL11BQ9BPW5 248 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 KMT2CQ8NEZ4 4911 aaKnown RBP10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 RRASP10301 218 aa10.73□□□□□ -0.69
PDLIM2-213ENST00000448520 G6PCP35575 357 aa10.73□□□□□ -0.69
PDLIM2-213ENST00000448520 TAGLNQ01995 201 aaKnown RBP10.73□□□□□ -0.69
PDLIM2-213ENST00000448520 GALNT14Q96FL9 552 aa10.73□□□□□ -0.69
PDLIM2-213ENST00000448520 TMEM222Q9H0R3 208 aa10.73□□□□□ -0.69
PDLIM2-213ENST00000448520 PLSCR3Q9NRY6 295 aa10.73□□□□□ -0.69
PDLIM2-213ENST00000448520 A0A0G2JRQ6 117 aa10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 RBFOX2O43251 390 aaKnown RBP eCLIP10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 SLC25A17O43808 307 aa10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 KRASP01116 189 aa10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 IGKV1-5P01602 117 aa10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 RPLP1P05386 114 aaKnown RBP10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 SERPINE2P07093 398 aa10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 SAA1P0DJI8 122 aaPredicted RBP10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 PSG5Q15238 335 aa10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 MMDQ15546 238 aa10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 TMEM268Q5VZI3 342 aa10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 LCNL1Q6ZST4 164 aa10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 SELENOHQ8IZQ5 122 aaKnown RBP10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 ALX4Q9H161 411 aaPredicted RBP10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 FBXL15Q9H469 300 aa10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 PLEKHA2Q9HB19 425 aa10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 KCNIP3Q9Y2W7 256 aa10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 LSM4Q9Y4Z0 139 aaKnown RBP10.72□□□□□ -0.69
PDLIM2-213ENST00000448520 TRAV3A0A0B4J244 114 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 NBR2O15453 112 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 HPRT1P00492 218 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 IGHG4P01861 327 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 IL5P05113 134 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 MYOD1P15172 320 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 CBX3Q13185 183 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 TATDN3Q17R31 274 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 SLC35G3Q8N808 338 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 OSR1Q8TAX0 266 aaPredicted RBP10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 CD300LFQ8TDQ1 290 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 ZNF431Q8TF32 576 aaPredicted RBP10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 DUX3Q96PT4 197 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 CLCC1Q96S66 551 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 METTL1Q9UBP6 276 aaKnown RBP10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 ZNF580Q9UK33 172 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 ALG5Q9Y673 324 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 U3KQK5 164 aa10.71□□□□□ -0.69
PDLIM2-213ENST00000448520 FCN1O00602 326 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 RRHO14718 337 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 CDS2O95674 445 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 CRYGBP07316 175 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 VDAC1P21796 283 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 PJVKQ0ZLH3 352 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 MRGPRG-AS1Q2M3A8 158 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 OR4A47Q6IF82 309 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 LYZL2Q7Z4W2 148 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 TCTEX1D1Q8N7M0 179 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 UXS1Q8NBZ7 420 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 DMBX1Q8NFW5 382 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 NPBQ8NG41 125 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 SEC22AQ96IW7 307 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 RHOVQ96L33 236 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 TSNAXQ99598 290 aaKnown RBP10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 TMEM140Q9NV12 185 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 COMMD9Q9P000 198 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 NSG2Q9Y328 171 aa10.7□□□□□ -0.7
PDLIM2-213ENST00000448520 MARCH11A6NNE9 402 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 SEC14L6B5MCN3 397 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 CCSO14618 274 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 ADAP1O75689 374 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 NDUFA3O95167 84 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 DHFRP00374 187 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 HRASP01112 189 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 IGF1P05019 195 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 HOXB5P09067 269 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 OR9G9P0C7N8 305 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 ANXA3P12429 323 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 NQO2P16083 231 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 INSL3P51460 131 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 AKR1C2P52895 323 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 CFHR3Q02985 330 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 PUSL1Q8N0Z8 303 aaKnown RBP10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 LGI3Q8N145 548 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 FAM71E2Q8N5Q1 922 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 MITD1Q8WV92 249 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 C4orf3Q8WVX3 66 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 RBPMSQ93062 196 aaKnown RBP10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 TMEM56Q96MV1 263 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 FAM212BQ9NTI7 297 aaPredicted RBP10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 TMEM56-RWDD3S4R434 201 aa10.69□□□□□ -0.7
PDLIM2-213ENST00000448520 C7orf66A4D0T2 115 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 MPTX1A8MV57 137 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 PRAF2O60831 178 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 B3GALNT1O75752 331 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 P0C879 139 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 PSMB8P28062 276 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 LGALS7P47929 136 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 OR2B8PP59922 312 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms