RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 DIRC2Q96SL1 478 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 MIEN1Q9BRT3 115 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 GGTLC1Q9BX51 225 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 HELTA6NFD8 242 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 DLEU1O43261 78 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 SMIM21Q3B7S5 101 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 DCAF10Q5QP82 559 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 Q6ZN92 141 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 Q6ZR03 302 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 STPG3Q8N7X2 389 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 IL36BQ9NZH7 164 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 ARFGEF3Q5TH69 2177 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 TRGV5A0A0B4J1U4 118 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 IL6RP08887 468 aaPredicted RBP13.16□□□□□ -0.3
CHRD-205ENST00000448472 CD99P14209 185 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 RAB4AP20338 218 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 C11orf42Q8N5U0 333 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 DEFB108BQ8NET1 73 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 TRIB1Q96RU8 372 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 NPVFQ9HCQ7 196 aa13.16□□□□□ -0.3
CHRD-205ENST00000448472 ADAMTS20P59510 1910 aa13.15□□□□□ -0.3
CHRD-205ENST00000448472 TMEM210A6NLX4 147 aa13.15□□□□□ -0.3
CHRD-205ENST00000448472 PRR27Q6MZM9 219 aa13.15□□□□□ -0.3
CHRD-205ENST00000448472 TEPPQ6URK8 271 aa13.15□□□□□ -0.3
CHRD-205ENST00000448472 TMEM140Q9NV12 185 aa13.15□□□□□ -0.3
CHRD-205ENST00000448472 TBL2Q9Y4P3 447 aaKnown RBP13.15□□□□□ -0.3
CHRD-205ENST00000448472 MYOD1P15172 320 aa13.15□□□□□ -0.3
CHRD-205ENST00000448472 ERVK11-1P61568 191 aa13.15□□□□□ -0.3
CHRD-205ENST00000448472 ATP1A1-AS1Q5TC04 95 aa13.15□□□□□ -0.3
CHRD-205ENST00000448472 SLC35E4Q6ICL7 350 aa13.15□□□□□ -0.3
CHRD-205ENST00000448472 BORCS7Q96B45 105 aa13.15□□□□□ -0.3
CHRD-205ENST00000448472 TCF19Q9Y242 345 aa13.15□□□□□ -0.3
CHRD-205ENST00000448472 DSPP15924 2871 aaKnown RBP13.15□□□□□ -0.3
CHRD-205ENST00000448472 STAG3L2P0CL84 134 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 STAG3L3P0CL85 134 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 MMDQ15546 238 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 CENPWQ5EE01 88 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 TMEM144Q7Z5S9 345 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 TMPRSS2O15393 492 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 SIAH2O43255 324 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 CD46P15529 392 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 PAX1P15863 534 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 IGFBP2P18065 325 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 NPY1RP25929 384 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 SRIP30626 198 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 GNG10P50151 68 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 SPATA45Q537H7 98 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 MRPS18CQ9Y3D5 142 aaKnown RBP13.14□□□□□ -0.31
CHRD-205ENST00000448472 DMDP11532 3685 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 TNFSF13O75888 250 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 CA1P00915 261 aaPredicted RBP13.14□□□□□ -0.31
CHRD-205ENST00000448472 OPRK1P41145 380 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 HNRNPA3P51991 378 aaKnown RBP13.14□□□□□ -0.31
CHRD-205ENST00000448472 EFNB3Q15768 340 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 ACP7Q6ZNF0 438 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 MIR17HGQ75NE6 70 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 ZNRF1Q8ND25 227 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 SSBP3Q9BWW4 388 aaPredicted RBP13.14□□□□□ -0.31
CHRD-205ENST00000448472 FOXJ2Q9P0K8 574 aa13.14□□□□□ -0.31
CHRD-205ENST00000448472 KLF13Q9Y2Y9 288 aaPredicted RBP13.14□□□□□ -0.31
CHRD-205ENST00000448472 KIR2DL5BA0A0G2JN68 375 aa13.13□□□□□ -0.31
CHRD-205ENST00000448472 KIR2DL5BA0A0G2JPC4 375 aa13.13□□□□□ -0.31
CHRD-205ENST00000448472 WNT2P09544 360 aa13.13□□□□□ -0.31
CHRD-205ENST00000448472 BRS3P32247 399 aa13.13□□□□□ -0.31
CHRD-205ENST00000448472 KIR2DL5AQ8N109 375 aa13.13□□□□□ -0.31
CHRD-205ENST00000448472 LYG1Q8N1E2 194 aa13.13□□□□□ -0.31
CHRD-205ENST00000448472 GNB4Q9HAV0 340 aa13.13□□□□□ -0.31
CHRD-205ENST00000448472 RPH3ALQ9UNE2 315 aa13.13□□□□□ -0.31
CHRD-205ENST00000448472 TNRC18O15417 2968 aaPredicted RBP13.13□□□□□ -0.31
CHRD-205ENST00000448472 RIF1Q5UIP0 2472 aaKnown RBP13.13□□□□□ -0.31
CHRD-205ENST00000448472 MPDU1O75352 247 aa13.13□□□□□ -0.31
CHRD-205ENST00000448472 SP1P08047 785 aa13.13□□□□□ -0.31
CHRD-205ENST00000448472 PRDX2P32119 198 aa13.13□□□□□ -0.31
CHRD-205ENST00000448472 DUTP33316 252 aaKnown RBP13.13□□□□□ -0.31
CHRD-205ENST00000448472 ST6GALNAC3Q8NDV1 305 aa13.13□□□□□ -0.31
CHRD-205ENST00000448472 EAF1Q96JC9 268 aaPredicted RBP13.13□□□□□ -0.31
CHRD-205ENST00000448472 CXXC4Q9H2H0 198 aa13.13□□□□□ -0.31
CHRD-205ENST00000448472 ZNF318Q5VUA4 2279 aa13.13□□□□□ -0.31
CHRD-205ENST00000448472 K7EN84 100 aa13.12□□□□□ -0.31
CHRD-205ENST00000448472 SS18L1O75177 396 aaPredicted RBP13.12□□□□□ -0.31
CHRD-205ENST00000448472 LPAR2Q9HBW0 351 aa13.12□□□□□ -0.31
CHRD-205ENST00000448472 SLC35D1Q9NTN3 355 aa13.12□□□□□ -0.31
CHRD-205ENST00000448472 CLCF1Q9UBD9 225 aa13.12□□□□□ -0.31
CHRD-205ENST00000448472 POLEQ07864 2286 aa13.12□□□□□ -0.31
CHRD-205ENST00000448472 HCFC1P51610 2035 aa13.12□□□□□ -0.31
CHRD-205ENST00000448472 SLC24A4Q8NFF2 622 aa13.12□□□□□ -0.31
CHRD-205ENST00000448472 RBM14Q96PK6 669 aaKnown RBP13.12□□□□□ -0.31
CHRD-205ENST00000448472 ZNF331Q9NQX6 463 aaPredicted RBP13.12□□□□□ -0.31
CHRD-205ENST00000448472 FBXL7Q9UJT9 491 aa13.12□□□□□ -0.31
CHRD-205ENST00000448472 RAB7AP51149 207 aa13.12□□□□□ -0.31
CHRD-205ENST00000448472 COL5A1-AS1Q5SY13 56 aa13.12□□□□□ -0.31
CHRD-205ENST00000448472 TPTE2P1Q5T6R2 138 aa13.12□□□□□ -0.31
CHRD-205ENST00000448472 NRN1Q9NPD7 142 aa13.12□□□□□ -0.31
CHRD-205ENST00000448472 IGHV1-2P23083 117 aa13.11□□□□□ -0.31
CHRD-205ENST00000448472 HES3Q5TGS1 186 aa13.11□□□□□ -0.31
CHRD-205ENST00000448472 WDR82Q6UXN9 313 aa13.11□□□□□ -0.31
CHRD-205ENST00000448472 MOB3BQ86TA1 216 aa13.11□□□□□ -0.31
CHRD-205ENST00000448472 CA2P00918 260 aa13.11□□□□□ -0.31
CHRD-205ENST00000448472 HINT1P49773 126 aaPredicted RBP13.11□□□□□ -0.31
CHRD-205ENST00000448472 CAMPP49913 170 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms