RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 VSTM2AQ8TAG5 236 aa10.39□□□□□ -0.75
HLA-DOB-207ENST00000447394 FYTTD1Q96QD9 318 aaKnown RBP10.39□□□□□ -0.75
HLA-DOB-207ENST00000447394 CITED2Q99967 270 aaPredicted RBP10.39□□□□□ -0.75
HLA-DOB-207ENST00000447394 NUDT15Q9NV35 164 aa10.39□□□□□ -0.75
HLA-DOB-207ENST00000447394 NUBP2Q9Y5Y2 271 aa10.39□□□□□ -0.75
HLA-DOB-207ENST00000447394 TEX22C9J3V5 150 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 CDS2O95674 445 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 P0C879 139 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 SPNP16150 400 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 PPIFP30405 207 aaKnown RBP10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 RPL27AP46776 148 aaKnown RBP10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 CRIP2P52943 208 aaPredicted RBP10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 UBE2MP61081 183 aaKnown RBP10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 DHODHQ02127 395 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 TMEM128Q5BJH2 165 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 KHDC1LQ5JSQ8 128 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 H2BFWTQ7Z2G1 175 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 SLC35G3Q8N808 338 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 OR52B4Q8NGK2 314 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 OR4A5Q8NH83 315 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 GALNT14Q96FL9 552 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 PHB2Q99623 299 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 KLK15Q9H2R5 256 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 CMYA5Q8N3K9 4069 aa10.38□□□□□ -0.75
HLA-DOB-207ENST00000447394 FAM240BA0A1B0GVZ2 78 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 C15orf61A6NNL5 157 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 ADARB2-AS1A8MUL3 147 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 CREBL2O60519 120 aaPredicted RBP10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 ACTL6BO94805 426 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 SFT2D2O95562 160 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 RPLP1P05386 114 aaKnown RBP10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 REG1AP05451 166 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 OR4E1P0C645 316 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 AREGP15514 252 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 SPINK9Q5DT21 86 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 MZT2BQ6NZ67 158 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 Q6ZRM9 215 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 NRARPQ7Z6K4 114 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 ZNF695Q8IW36 515 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 MINDY2Q8NBR6 621 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 OR5T1Q8NG75 326 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 OR10W1Q8NGF6 305 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 SPATA3Q8NHX4 192 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 RNASE11Q8TAA1 199 aaKnown RBP10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 RBPMSQ93062 196 aaKnown RBP10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 TMEM56Q96MV1 263 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 QTRT1Q9BXR0 403 aaKnown RBP10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 ZNF580Q9UK33 172 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 TMEM56-RWDD3S4R434 201 aa10.37□□□□□ -0.75
HLA-DOB-207ENST00000447394 A0A0B4J293 547 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 TEX50A0A1B0GTY4 177 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 C9orf170A2RU37 121 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 B3GALNT1O75752 331 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 NXPH3O95157 252 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 IGHG4P01861 327 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 HLA-AP01891 365 aaKnown RBP10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 PRH1P02810 166 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 PF4V1P10720 104 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 SLC35B1P78383 322 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 DHRS2Q13268 280 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 NSUN5P1Q3KNT7 163 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 C4orf46Q504U0 113 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 C11orf87Q6NUJ2 197 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 SHISA2Q6UWI4 295 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 LYZL2Q7Z4W2 148 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 OR4X2Q8NGF9 303 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 ENKURQ8TC29 256 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 MS4A10Q96PG2 267 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 SEC22CQ9BRL7 303 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 AIFM2Q9BRQ8 373 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 HINT2Q9BX68 163 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 FOXA2Q9Y261 457 aaPredicted RBP10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 KCNIP3Q9Y2W7 256 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 OR51B2Q9Y5P1 312 aa10.36□□□□□ -0.75
HLA-DOB-207ENST00000447394 TCRBV4S1A1TA0A5B7 111 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 RBMXL2O75526 392 aaKnown RBP10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 SNAPC5O75971 98 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 TSPAN15O95858 294 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 IGLV1-40P01703 118 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 H2AFB2P0C5Z0 115 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 ANXA3P12429 323 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 PSMB8P28062 276 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 MAS1LP35410 378 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 CD83Q01151 205 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 AKIRIN2Q53H80 203 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 LYG2Q86SG7 212 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 OR4A16Q8NH70 328 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 GPR146Q96CH1 333 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 COMMD5Q9GZQ3 224 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 TMEM14BQ9NUH8 114 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 COA4Q9NYJ1 87 aa10.35□□□□□ -0.75
HLA-DOB-207ENST00000447394 IGLC7A0M8Q6 106 aa10.34□□□□□ -0.75
HLA-DOB-207ENST00000447394 FOXE3Q13461 319 aa10.34□□□□□ -0.75
HLA-DOB-207ENST00000447394 TEX38Q6PEX7 206 aa10.34□□□□□ -0.75
HLA-DOB-207ENST00000447394 LGI3Q8N145 548 aa10.34□□□□□ -0.75
HLA-DOB-207ENST00000447394 RRNAD1Q96FB5 475 aaKnown RBP10.34□□□□□ -0.75
HLA-DOB-207ENST00000447394 OR5B12Q96R08 314 aa10.34□□□□□ -0.75
HLA-DOB-207ENST00000447394 SPIN2AQ99865 258 aa10.34□□□□□ -0.75
HLA-DOB-207ENST00000447394 SPIN2BQ9BPZ2 258 aa10.34□□□□□ -0.75
HLA-DOB-207ENST00000447394 GON7Q9BXV9 100 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms