RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 FAM234AQ9H0X4 552 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 SEPSECSQ9HD40 501 aaKnown RBP15.74■□□□□ 0.11
SDCBP-204ENST00000447182 ARL2-SNX15V9GYD0 113 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 IGHV2OR16-5A0A0B4J2B6 119 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 K7EN84 100 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 TCAPO15273 167 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 AREGP15514 252 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 ZNF90Q03938 601 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 TMEM106BQ9NUM4 274 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 DUSP13Q9UII6 198 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 TP53TG3Q9ULZ0 132 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 TECTAO75443 2155 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 UHRF2Q96PU4 802 aa15.73■□□□□ 0.11
SDCBP-204ENST00000447182 FOXA2Q9Y261 457 aaPredicted RBP15.73■□□□□ 0.11
SDCBP-204ENST00000447182 FNDC10F2Z333 226 aa15.73■□□□□ 0.11
SDCBP-204ENST00000447182 NPY1RP25929 384 aa15.73■□□□□ 0.11
SDCBP-204ENST00000447182 TPPP2P59282 170 aa15.73■□□□□ 0.11
SDCBP-204ENST00000447182 RAB31Q13636 194 aa15.73■□□□□ 0.11
SDCBP-204ENST00000447182 VWA1Q6PCB0 445 aa15.73■□□□□ 0.11
SDCBP-204ENST00000447182 TMEM14BQ9NUH8 114 aa15.73■□□□□ 0.11
SDCBP-204ENST00000447182 CACNA1GO43497 2377 aa15.73■□□□□ 0.11
SDCBP-204ENST00000447182 A8MXE2 369 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 M0R143 59 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 HNF1AP20823 631 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 THBS3P49746 956 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 RAB7AP51149 207 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 LGALS4P56470 323 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 LINC00310P59036 64 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 HSPE1P61604 102 aaKnown RBP15.72■□□□□ 0.11
SDCBP-204ENST00000447182 PRR20EP86478 221 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 PRR20CP86479 221 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 PRR20DP86480 221 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 PRR20BP86481 221 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 PRR20AP86496 221 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 HLA-DRB5Q30154 266 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 SPATA31B1PQ5VZV4 182 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 SLC24A4Q8NFF2 622 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 CBLN4Q9NTU7 201 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 PRR14LQ5THK1 2151 aa15.72■□□□□ 0.11
SDCBP-204ENST00000447182 IGHV1-18A0A0C4DH31 117 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 GRIFINA4D1Z8 144 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 RAB4AP20338 218 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 CBLN1P23435 193 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 ZNF124Q15973 351 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.71■□□□□ 0.11
SDCBP-204ENST00000447182 OR2Z1Q8NG97 314 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 EAF1Q96JC9 268 aaPredicted RBP15.71■□□□□ 0.11
SDCBP-204ENST00000447182 SFXN3Q9BWM7 321 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 MRPL18Q9H0U6 180 aaKnown RBP15.71■□□□□ 0.11
SDCBP-204ENST00000447182 NCOR1P1Q9H4R4 102 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 URB1O60287 2271 aaKnown RBP15.71■□□□□ 0.11
SDCBP-204ENST00000447182 TRBV9A0A0B4J1U6 114 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 CGB3P0DN86 165 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 CGB7P0DN87 165 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 CRISP2P16562 243 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 RANP62826 216 aaKnown RBP15.71■□□□□ 0.11
SDCBP-204ENST00000447182 C1orf229Q6ZS94 237 aaPredicted RBP15.71■□□□□ 0.11
SDCBP-204ENST00000447182 MRPL52Q86TS9 123 aaKnown RBP15.71■□□□□ 0.11
SDCBP-204ENST00000447182 C9orf106Q8NAJ2 232 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 CORO2AQ92828 525 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 TBX15Q96SF7 602 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 CALYQ9NYX4 217 aa15.71■□□□□ 0.11
SDCBP-204ENST00000447182 SLC25A10Q9UBX3 287 aaPredicted RBP15.71■□□□□ 0.11
SDCBP-204ENST00000447182 Q6ZWC4 215 aa15.7■□□□□ 0.1
SDCBP-204ENST00000447182 GCSAMQ8N6F7 178 aa15.7■□□□□ 0.1
SDCBP-204ENST00000447182 NEUROG1Q92886 237 aa15.7■□□□□ 0.1
SDCBP-204ENST00000447182 PLSCR4Q9NRQ2 329 aa15.7■□□□□ 0.1
SDCBP-204ENST00000447182 SLC17A3O00476 420 aa15.7■□□□□ 0.1
SDCBP-204ENST00000447182 FOXH1O75593 365 aa15.7■□□□□ 0.1
SDCBP-204ENST00000447182 Q0VG73 95 aa15.7■□□□□ 0.1
SDCBP-204ENST00000447182 OR4A47Q6IF82 309 aa15.7■□□□□ 0.1
SDCBP-204ENST00000447182 TEX43Q6ZNM6 134 aa15.7■□□□□ 0.1
SDCBP-204ENST00000447182 FAM169BQ8N8A8 192 aa15.7■□□□□ 0.1
SDCBP-204ENST00000447182 ZNF705FA8MVS1 300 aaPredicted RBP15.69■□□□□ 0.1
SDCBP-204ENST00000447182 CA2P00918 260 aa15.69■□□□□ 0.1
SDCBP-204ENST00000447182 OR10J4P0C629 311 aa15.69■□□□□ 0.1
SDCBP-204ENST00000447182 ZNF705DP0CH99 300 aaPredicted RBP15.69■□□□□ 0.1
SDCBP-204ENST00000447182 ZNF705BP0CI00 300 aaPredicted RBP15.69■□□□□ 0.1
SDCBP-204ENST00000447182 RPEL1Q2QD12 228 aa15.69■□□□□ 0.1
SDCBP-204ENST00000447182 DHRS13Q6UX07 377 aa15.69■□□□□ 0.1
SDCBP-204ENST00000447182 OR4P4Q8NGL7 312 aa15.69■□□□□ 0.1
SDCBP-204ENST00000447182 C20orf144Q9BQM9 153 aa15.69■□□□□ 0.1
SDCBP-204ENST00000447182 RAB9BQ9NP90 201 aa15.69■□□□□ 0.1
SDCBP-204ENST00000447182 ENY2Q9NPA8 101 aa15.69■□□□□ 0.1
SDCBP-204ENST00000447182 V9GYV3 84 aa15.69■□□□□ 0.1
SDCBP-204ENST00000447182 SERF1AO75920 110 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 IGHV3-13P01766 116 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 IGHV3-7P01780 117 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 LINC00869P0C866 280 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 POU2AF1Q16633 256 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 TPTE2P1Q5T6R2 138 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 HES3Q5TGS1 186 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 MMD2Q8IY49 270 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 ZNRF1Q8ND25 227 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 OR1L6Q8NGR2 347 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 PRR33A8MZF0 331 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 CDX4O14627 284 aaPredicted RBP15.68■□□□□ 0.1
SDCBP-204ENST00000447182 C17orf58Q2M2W7 97 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 KRTCAP3Q53RY4 240 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 CT45A1Q5HYN5 189 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms