RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 S1PR2O95136 353 aa15.7■□□□□ 0.1
SDC1-205ENST00000447124 NQO2P16083 231 aa15.7■□□□□ 0.1
SDC1-205ENST00000447124 CATR1Q13166 79 aa15.7■□□□□ 0.1
SDC1-205ENST00000447124 TMEM69Q5SWH9 247 aa15.7■□□□□ 0.1
SDC1-205ENST00000447124 SLC25A46Q96AG3 418 aa15.7■□□□□ 0.1
SDC1-205ENST00000447124 AIFM2Q9BRQ8 373 aa15.7■□□□□ 0.1
SDC1-205ENST00000447124 ZNF2Q9BSG1 426 aaPredicted RBP15.7■□□□□ 0.1
SDC1-205ENST00000447124 ZMAT4Q9H898 229 aa15.7■□□□□ 0.1
SDC1-205ENST00000447124 GGCTO75223 188 aaKnown RBP15.69■□□□□ 0.1
SDC1-205ENST00000447124 TNFAIP8O95379 198 aa15.69■□□□□ 0.1
SDC1-205ENST00000447124 EIF4EP06730 217 aaKnown RBP15.69■□□□□ 0.1
SDC1-205ENST00000447124 RPA2P15927 270 aa15.69■□□□□ 0.1
SDC1-205ENST00000447124 NCS1P62166 190 aa15.69■□□□□ 0.1
SDC1-205ENST00000447124 DEFB114Q30KQ6 69 aa15.69■□□□□ 0.1
SDC1-205ENST00000447124 CD300EQ496F6 205 aaPredicted RBP15.69■□□□□ 0.1
SDC1-205ENST00000447124 AADACL3Q5VUY0 350 aa15.69■□□□□ 0.1
SDC1-205ENST00000447124 LCN12Q6JVE5 192 aa15.69■□□□□ 0.1
SDC1-205ENST00000447124 CLEC19AQ6UXS0 136 aa15.69■□□□□ 0.1
SDC1-205ENST00000447124 MOB3AQ96BX8 217 aa15.69■□□□□ 0.1
SDC1-205ENST00000447124 PLEKHA2Q9HB19 425 aa15.69■□□□□ 0.1
SDC1-205ENST00000447124 IGLV11-55A0A075B6I3 123 aa15.68■□□□□ 0.1
SDC1-205ENST00000447124 IGLC7A0M8Q6 106 aa15.68■□□□□ 0.1
SDC1-205ENST00000447124 C2orf70A6NJV1 201 aa15.68■□□□□ 0.1
SDC1-205ENST00000447124 PRSS3P35030 304 aa15.68■□□□□ 0.1
SDC1-205ENST00000447124 HERV-K104P61576 105 aa15.68■□□□□ 0.1
SDC1-205ENST00000447124 HAGHQ16775 308 aa15.68■□□□□ 0.1
SDC1-205ENST00000447124 GPHB5Q86YW7 130 aa15.68■□□□□ 0.1
SDC1-205ENST00000447124 OR2K2Q8NGT1 345 aa15.68■□□□□ 0.1
SDC1-205ENST00000447124 MUC7Q8TAX7 377 aa15.68■□□□□ 0.1
SDC1-205ENST00000447124 FUNDC2Q9BWH2 189 aa15.68■□□□□ 0.1
SDC1-205ENST00000447124 VCX3AQ9NNX9 186 aa15.68■□□□□ 0.1
SDC1-205ENST00000447124 TMEM140Q9NV12 185 aa15.68■□□□□ 0.1
SDC1-205ENST00000447124 RYR2Q92736 4967 aa15.68■□□□□ 0.1
SDC1-205ENST00000447124 SACSQ9NZJ4 4579 aa15.67■□□□□ 0.1
SDC1-205ENST00000447124 LGALS9O00182 355 aa15.67■□□□□ 0.1
SDC1-205ENST00000447124 FOLR2P14207 255 aa15.67■□□□□ 0.1
SDC1-205ENST00000447124 VBP1P61758 197 aa15.67■□□□□ 0.1
SDC1-205ENST00000447124 FAM209BQ5JX69 171 aa15.67■□□□□ 0.1
SDC1-205ENST00000447124 OR5H2Q8NGV7 314 aa15.67■□□□□ 0.1
SDC1-205ENST00000447124 CD300LFQ8TDQ1 290 aa15.67■□□□□ 0.1
SDC1-205ENST00000447124 GPX8Q8TED1 209 aa15.67■□□□□ 0.1
SDC1-205ENST00000447124 COMMD3Q9UBI1 195 aa15.67■□□□□ 0.1
SDC1-205ENST00000447124 SELENOKQ9Y6D0 94 aa15.67■□□□□ 0.1
SDC1-205ENST00000447124 MFSD2BA6NFX1 497 aa15.66■□□□□ 0.1
SDC1-205ENST00000447124 CLEC3BP05452 202 aa15.66■□□□□ 0.1
SDC1-205ENST00000447124 HIST1H1BP16401 226 aaKnown RBP15.66■□□□□ 0.1
SDC1-205ENST00000447124 HLA-DMAP28067 261 aa15.66■□□□□ 0.1
SDC1-205ENST00000447124 ARL3P36405 182 aa15.66■□□□□ 0.1
SDC1-205ENST00000447124 LPAR6P43657 344 aa15.66■□□□□ 0.1
SDC1-205ENST00000447124 ZNF585BQ52M93 769 aa15.66■□□□□ 0.1
SDC1-205ENST00000447124 DMBX1Q8NFW5 382 aa15.66■□□□□ 0.1
SDC1-205ENST00000447124 OR10W1Q8NGF6 305 aa15.66■□□□□ 0.1
SDC1-205ENST00000447124 EEF1AKMT3Q96AZ1 226 aa15.66■□□□□ 0.1
SDC1-205ENST00000447124 TEX50A0A1B0GTY4 177 aa15.65■□□□□ 0.1
SDC1-205ENST00000447124 DHFRP00374 187 aa15.65■□□□□ 0.1
SDC1-205ENST00000447124 CD7P09564 240 aa15.65■□□□□ 0.1
SDC1-205ENST00000447124 DEFA4P12838 97 aa15.65■□□□□ 0.1
SDC1-205ENST00000447124 F2RP25116 425 aa15.65■□□□□ 0.1
SDC1-205ENST00000447124 TAS2R46P59540 309 aa15.65■□□□□ 0.1
SDC1-205ENST00000447124 CASC10Q5T4H9 136 aa15.65■□□□□ 0.1
SDC1-205ENST00000447124 LINC00322Q6ZN03 302 aaPredicted RBP15.65■□□□□ 0.1
SDC1-205ENST00000447124 GTSCR1Q86UQ5 136 aa15.65■□□□□ 0.1
SDC1-205ENST00000447124 FCAMRQ8WWV6 532 aa15.65■□□□□ 0.1
SDC1-205ENST00000447124 CITED4Q96RK1 184 aa15.65■□□□□ 0.1
SDC1-205ENST00000447124 COMMD5Q9GZQ3 224 aa15.65■□□□□ 0.1
SDC1-205ENST00000447124 FXYD6Q9H0Q3 95 aa15.65■□□□□ 0.1
SDC1-205ENST00000447124 COMMD9Q9P000 198 aa15.65■□□□□ 0.1
SDC1-205ENST00000447124 STARD9Q9P2P6 4700 aa15.64■□□□□ 0.09
SDC1-205ENST00000447124 RLN1P04808 185 aa15.64■□□□□ 0.09
SDC1-205ENST00000447124 CBLN1P23435 193 aa15.64■□□□□ 0.09
SDC1-205ENST00000447124 HRH1P35367 487 aa15.64■□□□□ 0.09
SDC1-205ENST00000447124 OR6F1Q8NGZ6 308 aa15.64■□□□□ 0.09
SDC1-205ENST00000447124 CACNG8Q8WXS5 425 aa15.64■□□□□ 0.09
SDC1-205ENST00000447124 DGCR14Q96DF8 476 aaKnown RBP15.64■□□□□ 0.09
SDC1-205ENST00000447124 CMTM3Q96MX0 182 aa15.64■□□□□ 0.09
SDC1-205ENST00000447124 TUBA4BQ9H853 241 aa15.64■□□□□ 0.09
SDC1-205ENST00000447124 EDA2RQ9HAV5 297 aa15.64■□□□□ 0.09
SDC1-205ENST00000447124 ZC4H2Q9NQZ6 224 aa15.64■□□□□ 0.09
SDC1-205ENST00000447124 TENM2Q9NT68 2774 aa15.64■□□□□ 0.09
SDC1-205ENST00000447124 TMEM213A2RRL7 107 aa15.63■□□□□ 0.09
SDC1-205ENST00000447124 APOA1P02647 267 aa15.63■□□□□ 0.09
SDC1-205ENST00000447124 FGF2P09038 288 aa15.63■□□□□ 0.09
SDC1-205ENST00000447124 ELK1P19419 428 aa15.63■□□□□ 0.09
SDC1-205ENST00000447124 WT1-ASQ06250 92 aa15.63■□□□□ 0.09
SDC1-205ENST00000447124 ZNF502Q8TBZ5 544 aa15.63■□□□□ 0.09
SDC1-205ENST00000447124 DYNLRB2Q8TF09 96 aa15.63■□□□□ 0.09
SDC1-205ENST00000447124 BORCS5Q969J3 196 aa15.63■□□□□ 0.09
SDC1-205ENST00000447124 NEURL2Q9BR09 285 aa15.63■□□□□ 0.09
SDC1-205ENST00000447124 SRSF8Q9BRL6 282 aaKnown RBP15.63■□□□□ 0.09
SDC1-205ENST00000447124 QTRT1Q9BXR0 403 aaKnown RBP15.63■□□□□ 0.09
SDC1-205ENST00000447124 NAA50Q9GZZ1 169 aaKnown RBP15.63■□□□□ 0.09
SDC1-205ENST00000447124 PLEKHA3Q9HB20 300 aa15.63■□□□□ 0.09
SDC1-205ENST00000447124 NSG2Q9Y328 171 aa15.63■□□□□ 0.09
SDC1-205ENST00000447124 TRBV7-1A0A0A6YYK4 115 aa15.62■□□□□ 0.09
SDC1-205ENST00000447124 ZNF320A2RRD8 509 aa15.62■□□□□ 0.09
SDC1-205ENST00000447124 GPR31O00270 319 aa15.62■□□□□ 0.09
SDC1-205ENST00000447124 KRASP01116 189 aa15.62■□□□□ 0.09
SDC1-205ENST00000447124 TRAPPC2P0DI81 140 aa15.62■□□□□ 0.09
SDC1-205ENST00000447124 TRAPPC2BP0DI82 140 aa15.62■□□□□ 0.09
SDC1-205ENST00000447124 CD81P60033 236 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms