RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 HRASLSQ9HDD0 168 aa13.73□□□□□ -0.21
COL9A1-205ENST00000447041 CEPT1Q9Y6K0 416 aa13.73□□□□□ -0.21
COL9A1-205ENST00000447041 TRAV3A0A0B4J244 114 aa13.72□□□□□ -0.21
COL9A1-205ENST00000447041 LGALS9O00182 355 aa13.72□□□□□ -0.21
COL9A1-205ENST00000447041 RBFOX2O43251 390 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL9A1-205ENST00000447041 TPPPO94811 219 aa13.72□□□□□ -0.21
COL9A1-205ENST00000447041 CATR1Q13166 79 aa13.72□□□□□ -0.21
COL9A1-205ENST00000447041 KLK9Q2XQG4 91 aa13.72□□□□□ -0.21
COL9A1-205ENST00000447041 LINC00322Q6ZN03 302 aaPredicted RBP13.72□□□□□ -0.21
COL9A1-205ENST00000447041 DEFB125Q8N687 156 aa13.72□□□□□ -0.21
COL9A1-205ENST00000447041 ZBTB34Q8NCN2 500 aa13.72□□□□□ -0.21
COL9A1-205ENST00000447041 OR51H1Q8NH63 302 aa13.72□□□□□ -0.21
COL9A1-205ENST00000447041 OR4A5Q8NH83 315 aa13.72□□□□□ -0.21
COL9A1-205ENST00000447041 EEF1AKMT3Q96AZ1 226 aa13.72□□□□□ -0.21
COL9A1-205ENST00000447041 WDR89Q96FK6 387 aaPredicted RBP13.72□□□□□ -0.21
COL9A1-205ENST00000447041 ZC4H2Q9NQZ6 224 aa13.72□□□□□ -0.21
COL9A1-205ENST00000447041 DIABLOQ9NR28 239 aa13.72□□□□□ -0.21
COL9A1-205ENST00000447041 KLK9Q9UKQ9 250 aa13.72□□□□□ -0.21
COL9A1-205ENST00000447041 IGLV11-55A0A075B6I3 123 aa13.71□□□□□ -0.21
COL9A1-205ENST00000447041 MFSD2BA6NFX1 497 aa13.71□□□□□ -0.21
COL9A1-205ENST00000447041 DHFRP00374 187 aa13.71□□□□□ -0.21
COL9A1-205ENST00000447041 TAS2R31P59538 309 aa13.71□□□□□ -0.21
COL9A1-205ENST00000447041 OR2B8PP59922 312 aa13.71□□□□□ -0.21
COL9A1-205ENST00000447041 GUCA2BQ16661 112 aa13.71□□□□□ -0.21
COL9A1-205ENST00000447041 KCTD21Q4G0X4 260 aa13.71□□□□□ -0.21
COL9A1-205ENST00000447041 GPHB5Q86YW7 130 aa13.71□□□□□ -0.21
COL9A1-205ENST00000447041 OR5AP2Q8NGF4 316 aa13.71□□□□□ -0.21
COL9A1-205ENST00000447041 FAM110AQ9BQ89 295 aa13.71□□□□□ -0.21
COL9A1-205ENST00000447041 SLC2A8Q9NY64 477 aa13.71□□□□□ -0.21
COL9A1-205ENST00000447041 DNAH1Q9P2D7 4330 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 LCE6AA0A183 80 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 TMEM213A2RRL7 107 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 S1PR2O95136 353 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 HPRT1P00492 218 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 IFNA6P05013 189 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 DEFA4P12838 97 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 HIST1H1BP16401 226 aaKnown RBP13.7□□□□□ -0.22
COL9A1-205ENST00000447041 CBX5P45973 191 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 POU2AF1Q16633 256 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 AADACL3Q5VUY0 350 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 GIMAP1Q8WWP7 306 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 HIPK2Q9H2X6 1198 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 SRD5A3Q9H8P0 318 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 IFT46Q9NQC8 304 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 TMEM140Q9NV12 185 aa13.7□□□□□ -0.22
COL9A1-205ENST00000447041 TECRQ9NZ01 308 aaKnown RBP13.7□□□□□ -0.22
COL9A1-205ENST00000447041 IGLC7A0M8Q6 106 aa13.69□□□□□ -0.22
COL9A1-205ENST00000447041 RBMY1BA6NDE4 496 aaKnown RBP13.69□□□□□ -0.22
COL9A1-205ENST00000447041 RBMY1EA6NEQ0 496 aaKnown RBP13.69□□□□□ -0.22
COL9A1-205ENST00000447041 A8MWP6 167 aa13.69□□□□□ -0.22
COL9A1-205ENST00000447041 UPK2O00526 184 aa13.69□□□□□ -0.22
COL9A1-205ENST00000447041 RBMY1DP0C7P1 496 aaKnown RBP13.69□□□□□ -0.22
COL9A1-205ENST00000447041 RPA2P15927 270 aa13.69□□□□□ -0.22
COL9A1-205ENST00000447041 NQO2P16083 231 aa13.69□□□□□ -0.22
COL9A1-205ENST00000447041 CBLN1P23435 193 aa13.69□□□□□ -0.22
COL9A1-205ENST00000447041 AIFM2Q9BRQ8 373 aa13.69□□□□□ -0.22
COL9A1-205ENST00000447041 EHFQ9NZC4 300 aa13.69□□□□□ -0.22
COL9A1-205ENST00000447041 ZNF320A2RRD8 509 aa13.68□□□□□ -0.22
COL9A1-205ENST00000447041 OR11H12B2RN74 326 aa13.68□□□□□ -0.22
COL9A1-205ENST00000447041 XRCC3O43542 346 aa13.68□□□□□ -0.22
COL9A1-205ENST00000447041 GNRHRP30968 328 aa13.68□□□□□ -0.22
COL9A1-205ENST00000447041 GPR183P32249 361 aa13.68□□□□□ -0.22
COL9A1-205ENST00000447041 HERV-K104P61576 105 aa13.68□□□□□ -0.22
COL9A1-205ENST00000447041 UBE2NLQ5JXB2 153 aa13.68□□□□□ -0.22
COL9A1-205ENST00000447041 TMEM61Q8N0U2 210 aa13.68□□□□□ -0.22
COL9A1-205ENST00000447041 DMBX1Q8NFW5 382 aa13.68□□□□□ -0.22
COL9A1-205ENST00000447041 MLXQ9UH92 298 aa13.68□□□□□ -0.22
COL9A1-205ENST00000447041 TRBV7-1A0A0A6YYK4 115 aa13.67□□□□□ -0.22
COL9A1-205ENST00000447041 TMEM127O75204 238 aa13.67□□□□□ -0.22
COL9A1-205ENST00000447041 RLN1P04808 185 aa13.67□□□□□ -0.22
COL9A1-205ENST00000447041 CLEC3BP05452 202 aa13.67□□□□□ -0.22
COL9A1-205ENST00000447041 RFX2P48378 723 aa13.67□□□□□ -0.22
COL9A1-205ENST00000447041 TAS2R20P59543 309 aa13.67□□□□□ -0.22
COL9A1-205ENST00000447041 LSM3P62310 102 aaKnown RBP13.67□□□□□ -0.22
COL9A1-205ENST00000447041 FAM106AQ4KMX7 169 aa13.67□□□□□ -0.22
COL9A1-205ENST00000447041 ZNF57Q68EA5 555 aaPredicted RBP13.67□□□□□ -0.22
COL9A1-205ENST00000447041 UNQ9165/PRO28630Q6UXU0 137 aa13.67□□□□□ -0.22
COL9A1-205ENST00000447041 OR10W1Q8NGF6 305 aa13.67□□□□□ -0.22
COL9A1-205ENST00000447041 S100A16Q96FQ6 103 aaKnown RBP13.67□□□□□ -0.22
COL9A1-205ENST00000447041 CXorf58Q96LI9 332 aa13.67□□□□□ -0.22
COL9A1-205ENST00000447041 ZNF2Q9BSG1 426 aaPredicted RBP13.67□□□□□ -0.22
COL9A1-205ENST00000447041 COMMD5Q9GZQ3 224 aa13.67□□□□□ -0.22
COL9A1-205ENST00000447041 PLEKHA2Q9HB19 425 aa13.67□□□□□ -0.22
COL9A1-205ENST00000447041 COMMD9Q9P000 198 aa13.67□□□□□ -0.22
COL9A1-205ENST00000447041 ANAPC10Q9UM13 185 aa13.67□□□□□ -0.22
COL9A1-205ENST00000447041 IGHV3-35A0A0C4DH35 117 aa13.66□□□□□ -0.22
COL9A1-205ENST00000447041 PMP2P02689 132 aa13.66□□□□□ -0.22
COL9A1-205ENST00000447041 RPS19P39019 145 aaKnown RBP13.66□□□□□ -0.22
COL9A1-205ENST00000447041 TM4SF20Q53R12 229 aa13.66□□□□□ -0.22
COL9A1-205ENST00000447041 TMEM69Q5SWH9 247 aa13.66□□□□□ -0.22
COL9A1-205ENST00000447041 BTNL8Q6UX41 500 aa13.66□□□□□ -0.22
COL9A1-205ENST00000447041 SAMD12Q8N8I0 201 aa13.66□□□□□ -0.22
COL9A1-205ENST00000447041 UXS1Q8NBZ7 420 aa13.66□□□□□ -0.22
COL9A1-205ENST00000447041 ZNF502Q8TBZ5 544 aa13.66□□□□□ -0.22
COL9A1-205ENST00000447041 CD300LFQ8TDQ1 290 aa13.66□□□□□ -0.22
COL9A1-205ENST00000447041 MOB3AQ96BX8 217 aa13.66□□□□□ -0.22
COL9A1-205ENST00000447041 QTRT1Q9BXR0 403 aaKnown RBP13.66□□□□□ -0.22
COL9A1-205ENST00000447041 FXYD6Q9H0Q3 95 aa13.66□□□□□ -0.22
COL9A1-205ENST00000447041 MARCH11A6NNE9 402 aa13.65□□□□□ -0.22
COL9A1-205ENST00000447041 SCAF4O95104 1147 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms