RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 MLNRO43193 412 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 VENTXO95231 258 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 MYOD1P15172 320 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 TNFSF4P23510 183 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 STPG3Q8N7X2 389 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 OR5AU1Q8NGC0 362 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 CLCF1Q9UBD9 225 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 IQCF6A8MYZ5 107 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 H0Y8G0 127 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 J3QR06 171 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 TOX4O94842 621 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 APELAP0DMC3 54 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 RAB4AP20338 218 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 GCHFRP30047 84 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 TAS2R60P59551 318 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 S100A7AQ86SG5 101 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 YPEL4Q96NS1 127 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 WDR83OSQ9Y284 106 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 IL6RP08887 468 aaPredicted RBP9.89□□□□□ -0.83
MSH6-204ENST00000445503 ADMP35318 185 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 CAMPP49913 170 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 OR5R1Q8NH85 324 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 ITLN1Q8WWA0 313 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 SLC35E1Q96K37 410 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 NDUFAF3Q9BU61 184 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 RAB9BQ9NP90 201 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 SLC35D1Q9NTN3 355 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 C15orf62A8K5M9 175 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 MGST3O14880 152 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 IGLV2-14P01704 120 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 IGFBP2P18065 325 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 RTL8BQ17RB0 113 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 HLA-DRB5Q30154 266 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 ZNF114Q8NC26 417 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 SGK494Q96LW2 274 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 CCL13Q99616 98 aa9.89□□□□□ -0.83
MSH6-204ENST00000445503 MBNL3Q9NUK0 354 aaKnown RBP9.89□□□□□ -0.83
MSH6-204ENST00000445503 PLAUP00749 431 aa9.88□□□□□ -0.83
MSH6-204ENST00000445503 CA2P00918 260 aa9.88□□□□□ -0.83
MSH6-204ENST00000445503 KLF3P57682 345 aaPredicted RBP9.88□□□□□ -0.83
MSH6-204ENST00000445503 CALYQ9NYX4 217 aa9.88□□□□□ -0.83
MSH6-204ENST00000445503 SLC45A2Q9UMX9 530 aa9.88□□□□□ -0.83
MSH6-204ENST00000445503 OR51B2Q9Y5P1 312 aa9.88□□□□□ -0.83
MSH6-204ENST00000445503 TAS2R45P59539 299 aa9.88□□□□□ -0.83
MSH6-204ENST00000445503 Q6ZT83 130 aa9.88□□□□□ -0.83
MSH6-204ENST00000445503 BHLHA15Q7RTS1 189 aaPredicted RBP9.88□□□□□ -0.83
MSH6-204ENST00000445503 ZNF439Q8NDP4 499 aa9.88□□□□□ -0.83
MSH6-204ENST00000445503 CORO2AQ92828 525 aa9.88□□□□□ -0.83
MSH6-204ENST00000445503 DUTP33316 252 aaKnown RBP9.88□□□□□ -0.83
MSH6-204ENST00000445503 TRAT1Q6PIZ9 186 aa9.88□□□□□ -0.83
MSH6-204ENST00000445503 TREML4Q6UXN2 200 aa9.88□□□□□ -0.83
MSH6-204ENST00000445503 CEP192Q8TEP8 1941 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 TMPRSS2O15393 492 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 FOXH1O75593 365 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 UBE2L3P68036 154 aaKnown RBP9.87□□□□□ -0.83
MSH6-204ENST00000445503 MIR17HGQ75NE6 70 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 MMD2Q8IY49 270 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 FDCSPQ8NFU4 85 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 TNCP24821 2201 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 MPDU1O75352 247 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 PRR31Q5SQ13 230 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 C9orf106Q8NAJ2 232 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 BLNKQ8WV28 456 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 SSBP3Q9BWW4 388 aaPredicted RBP9.87□□□□□ -0.83
MSH6-204ENST00000445503 SEPSECSQ9HD40 501 aaKnown RBP9.87□□□□□ -0.83
MSH6-204ENST00000445503 SPTBN1Q01082 2364 aaKnown RBP9.87□□□□□ -0.83
MSH6-204ENST00000445503 MED13LQ71F56 2210 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 YLPM1P49750 1951 aaKnown RBP9.87□□□□□ -0.83
MSH6-204ENST00000445503 TRAV17A0A0B4J275 112 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 NPIPB11E5RHQ5 1161 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 COX7A2P2O60397 106 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 SERF1AO75920 110 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 APOA2P02652 100 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 LCN2P80188 198 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 TNFAIP6P98066 277 aaPredicted RBP9.87□□□□□ -0.83
MSH6-204ENST00000445503 TMEM183BQ1AE95 376 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 STUMQ69YW2 141 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 CD177Q8N6Q3 437 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 ATG2AQ2TAZ0 1938 aa9.87□□□□□ -0.83
MSH6-204ENST00000445503 EREGO14944 169 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 LMO1P25800 156 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 RANP62826 216 aaKnown RBP9.86□□□□□ -0.83
MSH6-204ENST00000445503 WFDC8Q8IUA0 241 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 OR10X1Q8NGY0 326 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 AGMATQ9BSE5 352 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 WNK2Q9Y3S1 2297 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 ARFGEF3Q5TH69 2177 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 IGHV3-21A0A0B4J1V1 117 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 OPRK1P41145 380 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 RAB7AP51149 207 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 ERVK11-1P61568 191 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 CCL8P80075 99 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 ERHP84090 104 aaKnown RBP9.86□□□□□ -0.83
MSH6-204ENST00000445503 SRSF6Q13247 344 aaKnown RBP9.86□□□□□ -0.83
MSH6-204ENST00000445503 CENPWQ5EE01 88 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 ATOH7Q8N100 152 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 TMEM68Q96MH6 324 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 TECRQ9NZ01 308 aaKnown RBP9.86□□□□□ -0.83
MSH6-204ENST00000445503 HSBP1O75506 76 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 NPPCP23582 126 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms