RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 CBX5P45973 191 aa15.88■□□□□ 0.13
VSX1-206ENST00000444511 FAM106AQ4KMX7 169 aa15.88■□□□□ 0.13
VSX1-206ENST00000444511 GPHB5Q86YW7 130 aa15.88■□□□□ 0.13
VSX1-206ENST00000444511 GAR1Q9NY12 217 aaKnown RBP15.88■□□□□ 0.13
VSX1-206ENST00000444511 LCE6AA0A183 80 aa15.87■□□□□ 0.13
VSX1-206ENST00000444511 ZNF320A2RRD8 509 aa15.87■□□□□ 0.13
VSX1-206ENST00000444511 TAS2R31P59538 309 aa15.87■□□□□ 0.13
VSX1-206ENST00000444511 TMEM17Q86X19 198 aa15.87■□□□□ 0.13
VSX1-206ENST00000444511 DEFB125Q8N687 156 aa15.87■□□□□ 0.13
VSX1-206ENST00000444511 OR5AP2Q8NGF4 316 aa15.87■□□□□ 0.13
VSX1-206ENST00000444511 RETNQ9HD89 108 aa15.87■□□□□ 0.13
VSX1-206ENST00000444511 ZC4H2Q9NQZ6 224 aa15.87■□□□□ 0.13
VSX1-206ENST00000444511 TENM2Q9NT68 2774 aa15.87■□□□□ 0.13
VSX1-206ENST00000444511 CGB1A6NKQ9 187 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 TMEM127O75204 238 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 HPRT1P00492 218 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 NQO2P16083 231 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 CBLN1P23435 193 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 OR2B8PP59922 312 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 KLK9Q2XQG4 91 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 LINC00322Q6ZN03 302 aaPredicted RBP15.86■□□□□ 0.13
VSX1-206ENST00000444511 OR51H1Q8NH63 302 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 GIMAP1Q8WWP7 306 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 CACNG8Q8WXS5 425 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 WDR89Q96FK6 387 aaPredicted RBP15.86■□□□□ 0.13
VSX1-206ENST00000444511 CXorf58Q96LI9 332 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 COMMD5Q9GZQ3 224 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 HIPK2Q9H2X6 1198 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 IFT46Q9NQC8 304 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 KLK9Q9UKQ9 250 aa15.86■□□□□ 0.13
VSX1-206ENST00000444511 DYNC2H1Q8NCM8 4307 aaKnown RBP15.85■□□□□ 0.13
VSX1-206ENST00000444511 IGLV11-55A0A075B6I3 123 aa15.85■□□□□ 0.13
VSX1-206ENST00000444511 TRBV7-1A0A0A6YYK4 115 aa15.85■□□□□ 0.13
VSX1-206ENST00000444511 MEIS3P1A6NDR6 274 aa15.85■□□□□ 0.13
VSX1-206ENST00000444511 OR11H12B2RN74 326 aa15.85■□□□□ 0.13
VSX1-206ENST00000444511 HERV-K104P61576 105 aa15.85■□□□□ 0.13
VSX1-206ENST00000444511 AADACL3Q5VUY0 350 aa15.85■□□□□ 0.13
VSX1-206ENST00000444511 ZNF818PQ6ZRF7 136 aa15.85■□□□□ 0.13
VSX1-206ENST00000444511 CD300LFQ8TDQ1 290 aa15.85■□□□□ 0.13
VSX1-206ENST00000444511 BORCS5Q969J3 196 aa15.85■□□□□ 0.13
VSX1-206ENST00000444511 WFDC10AQ9H1F0 79 aa15.85■□□□□ 0.13
VSX1-206ENST00000444511 SRD5A3Q9H8P0 318 aa15.85■□□□□ 0.13
VSX1-206ENST00000444511 RYR2Q92736 4967 aa15.84■□□□□ 0.13
VSX1-206ENST00000444511 TRAV3A0A0B4J244 114 aa15.84■□□□□ 0.13
VSX1-206ENST00000444511 MFSD2BA6NFX1 497 aa15.84■□□□□ 0.13
VSX1-206ENST00000444511 UPK2O00526 184 aa15.84■□□□□ 0.13
VSX1-206ENST00000444511 POU2AF1Q16633 256 aa15.84■□□□□ 0.13
VSX1-206ENST00000444511 KCTD21Q4G0X4 260 aa15.84■□□□□ 0.13
VSX1-206ENST00000444511 ZNF57Q68EA5 555 aaPredicted RBP15.84■□□□□ 0.13
VSX1-206ENST00000444511 SLC16A13Q7RTY0 426 aa15.84■□□□□ 0.13
VSX1-206ENST00000444511 DMBX1Q8NFW5 382 aa15.84■□□□□ 0.13
VSX1-206ENST00000444511 S100A16Q96FQ6 103 aaKnown RBP15.84■□□□□ 0.13
VSX1-206ENST00000444511 FAM110AQ9BQ89 295 aa15.84■□□□□ 0.13
VSX1-206ENST00000444511 SELENOKQ9Y6D0 94 aa15.84■□□□□ 0.13
VSX1-206ENST00000444511 IGLC7A0M8Q6 106 aa15.83■□□□□ 0.12
VSX1-206ENST00000444511 TMEM213A2RRL7 107 aa15.83■□□□□ 0.12
VSX1-206ENST00000444511 RBMY1BA6NDE4 496 aaKnown RBP15.83■□□□□ 0.12
VSX1-206ENST00000444511 RBMY1EA6NEQ0 496 aaKnown RBP15.83■□□□□ 0.12
VSX1-206ENST00000444511 A8MWP6 167 aa15.83■□□□□ 0.12
VSX1-206ENST00000444511 XRCC3O43542 346 aa15.83■□□□□ 0.12
VSX1-206ENST00000444511 S1PR2O95136 353 aa15.83■□□□□ 0.12
VSX1-206ENST00000444511 CLEC3BP05452 202 aa15.83■□□□□ 0.12
VSX1-206ENST00000444511 RBMY1DP0C7P1 496 aaKnown RBP15.83■□□□□ 0.12
VSX1-206ENST00000444511 CROCCP3Q8IVE0 287 aa15.83■□□□□ 0.12
VSX1-206ENST00000444511 UXS1Q8NBZ7 420 aa15.83■□□□□ 0.12
VSX1-206ENST00000444511 SRSF8Q9BRL6 282 aaKnown RBP15.83■□□□□ 0.12
VSX1-206ENST00000444511 PLEKHA2Q9HB19 425 aa15.83■□□□□ 0.12
VSX1-206ENST00000444511 TMEM140Q9NV12 185 aa15.83■□□□□ 0.12
VSX1-206ENST00000444511 EHFQ9NZC4 300 aa15.83■□□□□ 0.12
VSX1-206ENST00000444511 THYN1Q9P016 225 aa15.83■□□□□ 0.12
VSX1-206ENST00000444511 TMEM61Q8N0U2 210 aa15.82■□□□□ 0.12
VSX1-206ENST00000444511 COMMD9Q9P000 198 aa15.82■□□□□ 0.12
VSX1-206ENST00000444511 MLXQ9UH92 298 aa15.82■□□□□ 0.12
VSX1-206ENST00000444511 CYB5BO43169 146 aa15.81■□□□□ 0.12
VSX1-206ENST00000444511 FGF2P09038 288 aa15.81■□□□□ 0.12
VSX1-206ENST00000444511 RPA2P15927 270 aa15.81■□□□□ 0.12
VSX1-206ENST00000444511 GNRHRP30968 328 aa15.81■□□□□ 0.12
VSX1-206ENST00000444511 GPR183P32249 361 aa15.81■□□□□ 0.12
VSX1-206ENST00000444511 ERVK-16P61578 105 aa15.81■□□□□ 0.12
VSX1-206ENST00000444511 UBE2NLQ5JXB2 153 aa15.81■□□□□ 0.12
VSX1-206ENST00000444511 IL17DQ8TAD2 202 aa15.81■□□□□ 0.12
VSX1-206ENST00000444511 QTRT1Q9BXR0 403 aaKnown RBP15.81■□□□□ 0.12
VSX1-206ENST00000444511 TGFBR1P36897 503 aa15.8■□□□□ 0.12
VSX1-206ENST00000444511 TM4SF20Q53R12 229 aa15.8■□□□□ 0.12
VSX1-206ENST00000444511 TMEM69Q5SWH9 247 aa15.8■□□□□ 0.12
VSX1-206ENST00000444511 THOC7Q6I9Y2 204 aaKnown RBP15.8■□□□□ 0.12
VSX1-206ENST00000444511 PLET1Q6UQ28 207 aa15.8■□□□□ 0.12
VSX1-206ENST00000444511 BTNL8Q6UX41 500 aa15.8■□□□□ 0.12
VSX1-206ENST00000444511 SAMD12Q8N8I0 201 aa15.8■□□□□ 0.12
VSX1-206ENST00000444511 OR52B4Q8NGK2 314 aa15.8■□□□□ 0.12
VSX1-206ENST00000444511 ZNF502Q8TBZ5 544 aa15.8■□□□□ 0.12
VSX1-206ENST00000444511 ZNF2Q9BSG1 426 aaPredicted RBP15.8■□□□□ 0.12
VSX1-206ENST00000444511 STARD9Q9P2P6 4700 aa15.79■□□□□ 0.12
VSX1-206ENST00000444511 SCAF4O95104 1147 aaKnown RBP15.79■□□□□ 0.12
VSX1-206ENST00000444511 RLN1P04808 185 aa15.79■□□□□ 0.12
VSX1-206ENST00000444511 TRAPPC2P0DI81 140 aa15.79■□□□□ 0.12
VSX1-206ENST00000444511 TRAPPC2BP0DI82 140 aa15.79■□□□□ 0.12
VSX1-206ENST00000444511 PTBP1P26599 531 aaKnown RBP eCLIP15.79■□□□□ 0.12
VSX1-206ENST00000444511 RFX2P48378 723 aa15.79■□□□□ 0.12
VSX1-206ENST00000444511 ANKRD55Q3KP44 614 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms