RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 WDR83OSQ9Y284 106 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 TRAV3A0A0B4J244 114 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 TEX50A0A1B0GTY4 177 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 TMEM218A2RU14 115 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 F8W036 122 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 INS-IGF2F8WCM5 200 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 SLC25A17O43808 307 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 RUNX1Q01196 453 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 GUK1Q16774 197 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 VWC2Q2TAL6 325 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 FFAR4Q5NUL3 377 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 RBMS3Q6XE24 437 aaKnown RBP4.89□□□□□ -1.63
VPS50-205ENST00000441602 HAPLN4Q86UW8 402 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 BPIFCQ8NFQ6 507 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 OR4P4Q8NGL7 312 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 SRSF8Q9BRL6 282 aaKnown RBP4.89□□□□□ -1.63
VPS50-205ENST00000441602 SIRT7Q9NRC8 400 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 C1RLQ9NZP8 487 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 TRAV1-1A0A0B4J248 108 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 CTXND1A0A1B0GTU2 59 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 A0A1B0GW64 132 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 A0A1W2PPR1 153 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 CORTO00230 105 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 AGPAT2O15120 278 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 TOX4O94842 621 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 CA2P00918 260 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 APOC3P02656 99 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 IL6RP08887 468 aaPredicted RBP4.88□□□□□ -1.63
VPS50-205ENST00000441602 ELLP55199 621 aaPredicted RBP4.88□□□□□ -1.63
VPS50-205ENST00000441602 DEFA5Q01523 94 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 ARL16Q0P5N6 197 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 UTF1Q5T230 341 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 ZNF787Q6DD87 383 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 SVBPQ8N300 66 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 C11orf42Q8N5U0 333 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 OR1L6Q8NGR2 347 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 OR2T10Q8NGZ9 312 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 RNASEH2CQ8TDP1 164 aaKnown RBP4.88□□□□□ -1.63
VPS50-205ENST00000441602 SFT2D1Q8WV19 159 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 CACNG8Q8WXS5 425 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 BPESC1Q9GZL8 116 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 ZNRD1Q9P1U0 126 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 A0A1W2PPV4 95 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 IGHV4-39P01824 125 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 IGKV1-16P04430 117 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 SLC25A16P16260 332 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 GPX4P36969 197 aaPredicted RBP4.88□□□□□ -1.63
VPS50-205ENST00000441602 LCN2P80188 198 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 PSG5Q15238 335 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 TNXAQ16473 311 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 PRSS8Q16651 343 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 C1orf229Q6ZS94 237 aaPredicted RBP4.88□□□□□ -1.63
VPS50-205ENST00000441602 VMO1Q7Z5L0 202 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 CENPVQ7Z7K6 275 aaPredicted RBP4.88□□□□□ -1.63
VPS50-205ENST00000441602 ABHD5Q8WTS1 349 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 RSG1Q9BU20 258 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 METTL1Q9UBP6 276 aaKnown RBP4.88□□□□□ -1.63
VPS50-205ENST00000441602 YLPM1P49750 1951 aaKnown RBP4.88□□□□□ -1.63
VPS50-205ENST00000441602 DSCAML1Q8TD84 2053 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 SCGB2A1O75556 95 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 SNAPINO95295 136 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 MOSP00540 346 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 PRB1P04280 392 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 SNRNP70P08621 437 aaKnown RBP4.88□□□□□ -1.63
VPS50-205ENST00000441602 HES1Q14469 280 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 TEPPQ6URK8 271 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 LYPD6BQ8NI32 183 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 NANPQ8TBE9 248 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 MBD3L1Q8WWY6 194 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 LINC00052Q96N35 136 aa4.88□□□□□ -1.63
VPS50-205ENST00000441602 USP34Q70CQ2 3546 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 IGHV3-72A0A0B4J1Y9 119 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 MAP1LC3B2A6NCE7 125 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 PMS2P5A8MQ11 134 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 NDUFS7O75251 213 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 CNIH1O95406 144 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 M6PRP20645 277 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 OPRK1P41145 380 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 HNF4GQ14541 408 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 SP5Q6BEB4 398 aaPredicted RBP4.87□□□□□ -1.63
VPS50-205ENST00000441602 OR10G4Q8NGN3 311 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 OR10G9Q8NGN4 311 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 OR10G7Q8NGN6 311 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 RNF2Q99496 336 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 SEC11CQ9BY50 192 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 NPCDR1Q9BY65 106 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 MAP1LC3BQ9GZQ8 125 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 ZNF430Q9H8G1 570 aaPredicted RBP4.87□□□□□ -1.63
VPS50-205ENST00000441602 NDUFA4L2Q9NRX3 87 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 NBASA2RRP1 2371 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 ATRXP46100 2492 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 FRYLO94915 3013 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 USF3Q68DE3 2245 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 CACNA1BQ00975 2339 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 SRRM4A7MD48 611 aaKnown RBP4.87□□□□□ -1.63
VPS50-205ENST00000441602 ODF3BA8MYP8 253 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 LY6LH3BQJ8 138 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 TIMM23O14925 209 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 FABP1P07148 127 aa4.87□□□□□ -1.63
VPS50-205ENST00000441602 OR13C7P0DN81 318 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms