RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 TESCQ96BS2 214 aa1.31□□□□□ -2.2
PFDN4-202ENST00000441080 HDHD2Q9H0R4 259 aa1.31□□□□□ -2.2
PFDN4-202ENST00000441080 TIMM22Q9Y584 194 aa1.31□□□□□ -2.2
PFDN4-202ENST00000441080 ZFHX2Q9C0A1 2572 aaPredicted RBP1.31□□□□□ -2.2
PFDN4-202ENST00000441080 MEIS3P1A6NDR6 274 aa1.3□□□□□ -2.2
PFDN4-202ENST00000441080 OR51F1A6NGY5 319 aa1.3□□□□□ -2.2
PFDN4-202ENST00000441080 I3L521 148 aa1.3□□□□□ -2.2
PFDN4-202ENST00000441080 MSMBP08118 114 aa1.3□□□□□ -2.2
PFDN4-202ENST00000441080 S100A7P31151 101 aa1.3□□□□□ -2.2
PFDN4-202ENST00000441080 ELOBQ15370 118 aa1.3□□□□□ -2.2
PFDN4-202ENST00000441080 FAM173BQ6P4H8 233 aa1.3□□□□□ -2.2
PFDN4-202ENST00000441080 ERMAPQ96PL5 475 aaPredicted RBP1.3□□□□□ -2.2
PFDN4-202ENST00000441080 SIPA1L1O43166 1804 aa1.3□□□□□ -2.2
PFDN4-202ENST00000441080 ABCC11Q96J66 1382 aa1.3□□□□□ -2.2
PFDN4-202ENST00000441080 IGKV3-7A0A075B6H7 116 aa1.29□□□□□ -2.2
PFDN4-202ENST00000441080 TRAPPC13A5PLN9 417 aa1.29□□□□□ -2.2
PFDN4-202ENST00000441080 MRPS14O60783 128 aaKnown RBP1.29□□□□□ -2.2
PFDN4-202ENST00000441080 OCM2P0CE71 109 aa1.29□□□□□ -2.2
PFDN4-202ENST00000441080 G6PCP35575 357 aa1.29□□□□□ -2.2
PFDN4-202ENST00000441080 REG1BP48304 166 aa1.29□□□□□ -2.2
PFDN4-202ENST00000441080 MAP3K7CLP57077 242 aa1.29□□□□□ -2.2
PFDN4-202ENST00000441080 OR4D2P58180 307 aa1.29□□□□□ -2.2
PFDN4-202ENST00000441080 EMX1Q04741 257 aaPredicted RBP1.29□□□□□ -2.2
PFDN4-202ENST00000441080 CDK5R1Q15078 307 aa1.29□□□□□ -2.2
PFDN4-202ENST00000441080 C1orf195Q5TG92 126 aa1.29□□□□□ -2.2
PFDN4-202ENST00000441080 FAM27BQ5VT28 67 aa1.29□□□□□ -2.2
PFDN4-202ENST00000441080 TMEM156Q8N614 296 aa1.29□□□□□ -2.2
PFDN4-202ENST00000441080 PIGXQ8TBF5 258 aa1.29□□□□□ -2.2
PFDN4-202ENST00000441080 DIRAS2Q96HU8 199 aa1.29□□□□□ -2.2
PFDN4-202ENST00000441080 ADAT1Q9BUB4 502 aaKnown RBP1.29□□□□□ -2.2
PFDN4-202ENST00000441080 FGFR1OP2Q9NVK5 253 aa1.29□□□□□ -2.2
PFDN4-202ENST00000441080 RSL24D1Q9UHA3 163 aaKnown RBP1.29□□□□□ -2.2
PFDN4-202ENST00000441080 SCAF11Q99590 1463 aaKnown RBP1.29□□□□□ -2.2
PFDN4-202ENST00000441080 M0QZ92 97 aa1.28□□□□□ -2.2
PFDN4-202ENST00000441080 CXCR6O00574 342 aa1.28□□□□□ -2.2
PFDN4-202ENST00000441080 SULT1A3P0DMM9 295 aa1.28□□□□□ -2.2
PFDN4-202ENST00000441080 SULT1A4P0DMN0 295 aa1.28□□□□□ -2.2
PFDN4-202ENST00000441080 MAP2K4P45985 399 aa1.28□□□□□ -2.2
PFDN4-202ENST00000441080 CLVS2Q5SYC1 327 aa1.28□□□□□ -2.2
PFDN4-202ENST00000441080 LRRN1Q6UXK5 716 aa1.28□□□□□ -2.2
PFDN4-202ENST00000441080 ZNF550Q7Z398 422 aa1.28□□□□□ -2.2
PFDN4-202ENST00000441080 C9orf163Q8N9P6 203 aa1.28□□□□□ -2.2
PFDN4-202ENST00000441080 OR1M1Q8NGA1 313 aa1.28□□□□□ -2.2
PFDN4-202ENST00000441080 ANKRD7Q92527 254 aa1.28□□□□□ -2.2
PFDN4-202ENST00000441080 PAQR5Q9NXK6 330 aaPredicted RBP1.28□□□□□ -2.2
PFDN4-202ENST00000441080 C3orf18Q9UK00 162 aa1.28□□□□□ -2.2
PFDN4-202ENST00000441080 PTPRBP23467 1997 aa1.28□□□□□ -2.2
PFDN4-202ENST00000441080 FREM1Q5H8C1 2179 aa1.27□□□□□ -2.21
PFDN4-202ENST00000441080 MALRD1Q5VYJ5 2156 aa1.27□□□□□ -2.21
PFDN4-202ENST00000441080 H0Y980 276 aa1.27□□□□□ -2.21
PFDN4-202ENST00000441080 TPM3P06753 285 aa1.27□□□□□ -2.21
PFDN4-202ENST00000441080 IL9P15248 144 aa1.27□□□□□ -2.21
PFDN4-202ENST00000441080 KCNE1P15382 129 aa1.27□□□□□ -2.21
PFDN4-202ENST00000441080 HLA-DMBP28068 263 aa1.27□□□□□ -2.21
PFDN4-202ENST00000441080 EVX1P49640 407 aa1.27□□□□□ -2.21
PFDN4-202ENST00000441080 OGFRL1Q5TC84 451 aaPredicted RBP1.27□□□□□ -2.21
PFDN4-202ENST00000441080 DCXRQ7Z4W1 244 aa1.27□□□□□ -2.21
PFDN4-202ENST00000441080 OR5B17Q8NGF7 314 aa1.27□□□□□ -2.21
PFDN4-202ENST00000441080 OR8B3Q8NGG8 313 aa1.27□□□□□ -2.21
PFDN4-202ENST00000441080 OR8D2Q9GZM6 311 aa1.27□□□□□ -2.21
PFDN4-202ENST00000441080 FAM96AQ9H5X1 160 aa1.27□□□□□ -2.21
PFDN4-202ENST00000441080 MED9Q9NWA0 146 aa1.27□□□□□ -2.21
PFDN4-202ENST00000441080 NAV1Q8NEY1 1877 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 EVPLLA8MZ36 301 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 IBA57-AS1B1ANH7 110 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 TRAPPC2LH3BP13 241 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 CETN3O15182 167 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 SLC22A1O15245 554 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 SLC16A4O15374 487 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 DEXIO95424 95 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 SRP19P09132 144 aaKnown RBP1.26□□□□□ -2.21
PFDN4-202ENST00000441080 MYL12AP19105 171 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 RPS12P25398 132 aaKnown RBP1.26□□□□□ -2.21
PFDN4-202ENST00000441080 CCR7P32248 378 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 RAB8BQ92930 207 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 ROPN1LQ96C74 230 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 USE1Q9NZ43 259 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 FUT9Q9Y231 359 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 ATP6V1DQ9Y5K8 247 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 COL6A6A6NMZ7 2263 aa1.26□□□□□ -2.21
PFDN4-202ENST00000441080 PIK3R4Q99570 1358 aa1.25□□□□□ -2.21
PFDN4-202ENST00000441080 TRBV10-2A0A0K0K1G8 114 aa1.25□□□□□ -2.21
PFDN4-202ENST00000441080 GGT3PA6NGU5 568 aa1.25□□□□□ -2.21
PFDN4-202ENST00000441080 LRRN3E7EW58 273 aa1.25□□□□□ -2.21
PFDN4-202ENST00000441080 SDCBPO00560 298 aaPredicted RBP1.25□□□□□ -2.21
PFDN4-202ENST00000441080 NOS1APO75052 506 aaPredicted RBP1.25□□□□□ -2.21
PFDN4-202ENST00000441080 UCHL3P15374 230 aa1.25□□□□□ -2.21
PFDN4-202ENST00000441080 TPM4P67936 248 aa1.25□□□□□ -2.21
PFDN4-202ENST00000441080 CAV1Q03135 178 aa1.25□□□□□ -2.21
PFDN4-202ENST00000441080 DMTNQ08495 405 aa1.25□□□□□ -2.21
PFDN4-202ENST00000441080 SURF2Q15527 256 aaPredicted RBP1.25□□□□□ -2.21
PFDN4-202ENST00000441080 NDUFA5Q16718 116 aa1.25□□□□□ -2.21
PFDN4-202ENST00000441080 LLPHQ9BRT6 129 aaKnown RBP1.25□□□□□ -2.21
PFDN4-202ENST00000441080 BAZ2BQ9UIF8 2168 aaKnown RBP1.25□□□□□ -2.21
PFDN4-202ENST00000441080 IGHV3-7P01780 117 aa1.24□□□□□ -2.21
PFDN4-202ENST00000441080 FAM228BP0C875 321 aa1.24□□□□□ -2.21
PFDN4-202ENST00000441080 UBBP0CG47 229 aa1.24□□□□□ -2.21
PFDN4-202ENST00000441080 MAGEA2P43356 314 aa1.24□□□□□ -2.21
PFDN4-202ENST00000441080 MARCKSL1P49006 195 aa1.24□□□□□ -2.21
PFDN4-202ENST00000441080 RPL18Q07020 188 aaKnown RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms