RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 SIX6O95475 246 aa11.7□□□□□ -0.54
PLOD3-205ENST00000440925 HKR1P10072 659 aa11.7□□□□□ -0.54
PLOD3-205ENST00000440925 COMPP49747 757 aaPredicted RBP11.7□□□□□ -0.54
PLOD3-205ENST00000440925 RPL8P62917 257 aaKnown RBP11.7□□□□□ -0.54
PLOD3-205ENST00000440925 FXYD3Q14802 87 aa11.7□□□□□ -0.54
PLOD3-205ENST00000440925 C9orf152Q5JTZ5 239 aa11.7□□□□□ -0.54
PLOD3-205ENST00000440925 FAM219AQ8IW50 185 aa11.7□□□□□ -0.54
PLOD3-205ENST00000440925 MMD2Q8IY49 270 aa11.7□□□□□ -0.54
PLOD3-205ENST00000440925 MINDY2Q8NBR6 621 aa11.7□□□□□ -0.54
PLOD3-205ENST00000440925 AIFM2Q9BRQ8 373 aa11.7□□□□□ -0.54
PLOD3-205ENST00000440925 PRSS22Q9GZN4 317 aa11.7□□□□□ -0.54
PLOD3-205ENST00000440925 WNT10AQ9GZT5 417 aa11.7□□□□□ -0.54
PLOD3-205ENST00000440925 RAB18Q9NP72 206 aa11.7□□□□□ -0.54
PLOD3-205ENST00000440925 NDUFA4L2Q9NRX3 87 aa11.7□□□□□ -0.54
PLOD3-205ENST00000440925 CACNG5Q9UF02 275 aa11.7□□□□□ -0.54
PLOD3-205ENST00000440925 DUXBA0A1W2PPF3 345 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 HMX3A6NHT5 357 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 C15orf61A6NNL5 157 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 ATP6V0E1O15342 81 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 ST8SIA3O43173 380 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 SOX15O60248 233 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 IGF1P05019 195 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 CRIP2P52943 208 aaPredicted RBP11.69□□□□□ -0.54
PLOD3-205ENST00000440925 RPL15P61313 204 aaKnown RBP11.69□□□□□ -0.54
PLOD3-205ENST00000440925 SRPXP78539 464 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 CFHR3Q02985 330 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 TNXAQ16473 311 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 CXorf66Q5JRM2 361 aaPredicted RBP11.69□□□□□ -0.54
PLOD3-205ENST00000440925 C19orf35Q6ZS72 473 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 UXS1Q8NBZ7 420 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 OR10W1Q8NGF6 305 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 COQ8AQ8NI60 647 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 VSTM2AQ8TAG5 236 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 PHB2Q99623 299 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 NPFFR1Q9GZQ6 430 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 FOXA2Q9Y261 457 aaPredicted RBP11.69□□□□□ -0.54
PLOD3-205ENST00000440925 TMED3Q9Y3Q3 217 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 OR51B2Q9Y5P1 312 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 WSB1Q9Y6I7 421 aa11.69□□□□□ -0.54
PLOD3-205ENST00000440925 A0A1B0GU03 582 aa11.68□□□□□ -0.54
PLOD3-205ENST00000440925 CREBL2O60519 120 aaPredicted RBP11.68□□□□□ -0.54
PLOD3-205ENST00000440925 FGF2P09038 288 aa11.68□□□□□ -0.54
PLOD3-205ENST00000440925 CXCL3P19876 107 aa11.68□□□□□ -0.54
PLOD3-205ENST00000440925 MDKP21741 143 aaPredicted RBP11.68□□□□□ -0.54
PLOD3-205ENST00000440925 PPIFP30405 207 aaKnown RBP11.68□□□□□ -0.54
PLOD3-205ENST00000440925 MAS1LP35410 378 aa11.68□□□□□ -0.54
PLOD3-205ENST00000440925 H2BFSP57053 126 aa11.68□□□□□ -0.54
PLOD3-205ENST00000440925 ERVK-16P61578 105 aa11.68□□□□□ -0.54
PLOD3-205ENST00000440925 HSPE1P61604 102 aaKnown RBP11.68□□□□□ -0.54
PLOD3-205ENST00000440925 GNB1P62873 340 aa11.68□□□□□ -0.54
PLOD3-205ENST00000440925 PLGLAQ15195 96 aa11.68□□□□□ -0.54
PLOD3-205ENST00000440925 FCN2Q15485 313 aa11.68□□□□□ -0.54
PLOD3-205ENST00000440925 HIST2H2BDQ6DRA6 164 aa11.68□□□□□ -0.54
PLOD3-205ENST00000440925 SLC35E3Q7Z769 313 aa11.68□□□□□ -0.54
PLOD3-205ENST00000440925 ZNF429Q86V71 674 aa11.68□□□□□ -0.54
PLOD3-205ENST00000440925 FOXRED2Q8IWF2 684 aa11.68□□□□□ -0.54
PLOD3-205ENST00000440925 OR4D5Q8NGN0 318 aa11.68□□□□□ -0.54
PLOD3-205ENST00000440925 SRSF12Q8WXF0 261 aaKnown RBP11.68□□□□□ -0.54
PLOD3-205ENST00000440925 RRNAD1Q96FB5 475 aaKnown RBP11.68□□□□□ -0.54
PLOD3-205ENST00000440925 GPN1Q9HCN4 374 aaPredicted RBP11.68□□□□□ -0.54
PLOD3-205ENST00000440925 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.68□□□□□ -0.54
PLOD3-205ENST00000440925 TMEM89A2RUT3 159 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 RBMXL2O75526 392 aaKnown RBP11.67□□□□□ -0.54
PLOD3-205ENST00000440925 APELAP0DMC3 54 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 SLC25A6P12236 298 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 AREGP15514 252 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 AKR1C2P52895 323 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 ID3Q02535 119 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 WT1-ASQ06250 92 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 SMCO1Q147U7 214 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 PDLIM3Q53GG5 364 aaPredicted RBP11.67□□□□□ -0.54
PLOD3-205ENST00000440925 SPINK9Q5DT21 86 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 LFNGQ8NES3 379 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 OR11H7Q8NGC8 314 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 OR4A16Q8NH70 328 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 SGMS2Q8NHU3 365 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 CHAC2Q8WUX2 184 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 COA4Q9NYJ1 87 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 PRNDQ9UKY0 176 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 DMRT1Q9Y5R6 373 aa11.67□□□□□ -0.54
PLOD3-205ENST00000440925 ATRQ13535 2644 aa11.66□□□□□ -0.54
PLOD3-205ENST00000440925 IGLC7A0M8Q6 106 aa11.66□□□□□ -0.54
PLOD3-205ENST00000440925 SNAPC5O75971 98 aa11.66□□□□□ -0.54
PLOD3-205ENST00000440925 ATG12O94817 140 aa11.66□□□□□ -0.54
PLOD3-205ENST00000440925 NXPH3O95157 252 aa11.66□□□□□ -0.54
PLOD3-205ENST00000440925 SULT1A3P0DMM9 295 aa11.66□□□□□ -0.54
PLOD3-205ENST00000440925 SULT1A4P0DMN0 295 aa11.66□□□□□ -0.54
PLOD3-205ENST00000440925 VDAC2P45880 294 aaPredicted RBP11.66□□□□□ -0.54
PLOD3-205ENST00000440925 RPL27AP46776 148 aaKnown RBP11.66□□□□□ -0.54
PLOD3-205ENST00000440925 PROK1P58294 105 aa11.66□□□□□ -0.54
PLOD3-205ENST00000440925 KIAA0141Q14154 515 aaPredicted RBP11.66□□□□□ -0.54
PLOD3-205ENST00000440925 TCTEX1D4Q5JR98 221 aa11.66□□□□□ -0.54
PLOD3-205ENST00000440925 STPG2Q8N412 459 aa11.66□□□□□ -0.54
PLOD3-205ENST00000440925 ZBTB8BQ8NAP8 495 aaPredicted RBP11.66□□□□□ -0.54
PLOD3-205ENST00000440925 GRPEL2Q8TAA5 225 aa11.66□□□□□ -0.54
PLOD3-205ENST00000440925 ARPC1AQ92747 370 aa11.66□□□□□ -0.54
PLOD3-205ENST00000440925 PARP11Q9NR21 331 aa11.66□□□□□ -0.54
PLOD3-205ENST00000440925 HSPB7Q9UBY9 170 aa11.66□□□□□ -0.54
PLOD3-205ENST00000440925 C13orf42A0A1B0GVH6 325 aa11.65□□□□□ -0.54
PLOD3-205ENST00000440925 CNIH1O95406 144 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms