RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 LMO1P25800 156 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 RPL23AP62750 156 aaKnown RBP4.91□□□□□ -1.62
PTPRR-204ENST00000440835 HAGHQ16775 308 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 BEAN1Q3B7T3 259 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 PRSS54Q6PEW0 395 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 VMO1Q7Z5L0 202 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 SLC35E3Q7Z769 313 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 FAM90A1Q86YD7 464 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 CALHM1Q8IU99 346 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 GCSAMQ8N6F7 178 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 CCDC71LQ8N9Z2 235 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 STXBP6Q8NFX7 210 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 OR4C13Q8NGP0 309 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 OR13D1Q8NGV5 346 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 OR10AC1Q8NH08 325 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 CFHR4Q92496 578 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 RARRES2Q99969 163 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 URM1Q9BTM9 101 aaKnown RBP4.91□□□□□ -1.62
PTPRR-204ENST00000440835 RTL8AQ9BWD3 113 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 MEGF9Q9H1U4 602 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 GSKIPQ9P0R6 139 aa4.91□□□□□ -1.62
PTPRR-204ENST00000440835 A0A1B0GV50 99 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 TGOLN2O43493 480 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 IGHV4-59P01825 116 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 TBPP20226 339 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 BRS3P32247 399 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 RPL29P47914 159 aaKnown RBP4.9□□□□□ -1.62
PTPRR-204ENST00000440835 PAX5Q02548 391 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 ZNF616Q08AN1 781 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 C1orf100Q5SVJ3 147 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 RTN4RL2Q86UN3 420 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 TMEM183AQ8IXX5 376 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 MTURNQ8N3F0 131 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 SLC35G3Q8N808 338 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 OR51A4Q8NGJ6 313 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 PTX4Q96A99 478 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 FAM3DQ96BQ1 224 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 RCC1LQ96I51 464 aaKnown RBP4.9□□□□□ -1.62
PTPRR-204ENST00000440835 GPER1Q99527 375 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 GEMIN7Q9H840 131 aaKnown RBP4.9□□□□□ -1.62
PTPRR-204ENST00000440835 MTCH1Q9NZJ7 389 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 UBE2J1Q9Y385 318 aaPredicted RBP4.9□□□□□ -1.62
PTPRR-204ENST00000440835 V9GYS6 101 aa4.9□□□□□ -1.62
PTPRR-204ENST00000440835 A0A1B0GW15 77 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 FBLL1A6NHQ2 334 aaKnown RBP4.9□□□□□ -1.63
PTPRR-204ENST00000440835 ZNF736B4DX44 427 aaPredicted RBP4.9□□□□□ -1.63
PTPRR-204ENST00000440835 H3BQ15 152 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 RAB27BO00194 218 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 DUS4LO95620 317 aaKnown RBP4.9□□□□□ -1.63
PTPRR-204ENST00000440835 CST4P01036 141 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 OR5H8P0DN80 308 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 SUMO1P63165 101 aaKnown RBP4.9□□□□□ -1.63
PTPRR-204ENST00000440835 ZNF92Q03936 586 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 SSBP1Q04837 148 aaKnown RBP4.9□□□□□ -1.63
PTPRR-204ENST00000440835 RAB32Q13637 225 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 SLC22A6Q4U2R8 563 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 SOHLH1Q5JUK2 328 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 GLYATL3Q5SZD4 288 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 SAMD5Q5TGI4 173 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 CST9LP1Q5W188 147 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 RUSC1-AS1Q66K80 236 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 STUMQ69YW2 141 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 EIF5AL1Q6IS14 154 aaKnown RBP4.9□□□□□ -1.63
PTPRR-204ENST00000440835 FAM46BQ96A09 425 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 REEP6Q96HR9 211 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 AJUBAQ96IF1 538 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 OR10C1Q96KK4 312 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 DNAJC4Q9NNZ3 241 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.9□□□□□ -1.63
PTPRR-204ENST00000440835 PITPNC1Q9UKF7 332 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 RAB22AQ9UL26 194 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 SLC7A11Q9UPY5 501 aa4.9□□□□□ -1.63
PTPRR-204ENST00000440835 ZNF816-ZNF321PA0A0X1KG74 233 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 GGCTO75223 188 aaKnown RBP4.89□□□□□ -1.63
PTPRR-204ENST00000440835 RBMXL2O75526 392 aaKnown RBP4.89□□□□□ -1.63
PTPRR-204ENST00000440835 TNFRSF6BO95407 300 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 CYB5AP00167 134 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 GCGP01275 180 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 GYPAP02724 150 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 RBP4P02753 201 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 IL6RP08887 468 aaPredicted RBP4.89□□□□□ -1.63
PTPRR-204ENST00000440835 CD37P11049 281 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 CHATP28329 748 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 PPP1CCP36873 323 aaKnown RBP4.89□□□□□ -1.63
PTPRR-204ENST00000440835 TFPI2P48307 235 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 KRTAP10-3P60369 221 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 WDR82Q6UXN9 313 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 ZNF788Q6ZQV5 615 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 Q6ZSR3 168 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 LRRC29Q8WV35 223 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 SMIM3Q9BZL3 60 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 NPFFR1Q9GZQ6 430 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 PIGLQ9Y2B2 252 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 CMYA5Q8N3K9 4069 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 PKD1L1Q8TDX9 2849 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 A0A087WWC5 75 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 KIR2DL5BA0A0G2JN68 375 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 KIR2DL5BA0A0G2JPC4 375 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 HSD17B6O14756 317 aa4.89□□□□□ -1.63
PTPRR-204ENST00000440835 IGLV3-1P01715 115 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms