RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ACP7Q6ZNF0 438 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 Q6ZR03 302 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 Q6ZS92 163 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF826PQ6ZT77 177 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 STX12Q86Y82 276 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 PUSL1Q8N0Z8 303 aaKnown RBP2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 LYG1Q8N1E2 194 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 TCTEX1D1Q8N7M0 179 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 HSD17B11Q8NBQ5 300 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 PRSS33Q8NF86 280 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR5C1Q8NGR4 320 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR10Z1Q8NGY1 313 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR2G3Q8NGZ4 309 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR8U1Q8NH10 309 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR51H1Q8NH63 302 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR1L1Q8NH94 360 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 GALMQ96C23 342 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 GNPNAT1Q96EK6 184 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 LURAP1Q96LR2 239 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 RAB40CQ96S21 281 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 ATP5SQ99766 215 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 PBDC1Q9BVG4 233 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 TOLLIPQ9H0E2 274 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 UFSP2Q9NUQ7 469 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 PPP1R3CQ9UQK1 317 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 SLC25A15Q9Y619 301 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 SDK1Q7Z5N4 2213 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 ASCC3Q8N3C0 2202 aaKnown RBP2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 C5orf42Q9H799 3197 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 KIAA1549Q9HCM3 1950 aa2.78□□□□□ -1.97
HMGB3P11-201ENST00000440127 MKI67P46013 3256 aaKnown RBP2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 REV3LO60673 3130 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 A0A0G2JRQ6 117 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 A0A1B0GW64 132 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 BTBD17A6NE02 478 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 FAM74A7A6NL05 159 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 C12orf77C9JDV5 145 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 H7C2Y5 167 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 K7N7A8 449 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 M0R1B8 84 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 TOR1AO14656 332 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 SYNGR2O43760 224 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 CST7O76096 145 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 TMEM50AO95807 157 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 IGKV1-39P01597 117 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 IGKV1-5P01602 117 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 IGHV3-13P01766 116 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 HBZP02008 142 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 IGKV1D-39P04432 117 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 GZMHP20718 246 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 OMGP23515 440 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 ATP6V0CP27449 155 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 CHRNB4P30926 498 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 CEACAM8P31997 349 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 PRDX2P32119 198 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 GLRXP35754 106 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 NBL1P41271 181 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 GABRA2P47869 451 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF83P51522 516 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 LINC01547P58512 204 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 TAS2R30P59541 319 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 RAB2AP61019 212 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF616Q08AN1 781 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 CATR1Q13166 79 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 FAM74A3Q4VXF1 159 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 DPPA3Q6W0C5 159 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 COX8CQ7Z4L0 72 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 LRP11Q86VZ4 500 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 CIARTQ8N365 385 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 FGFRL1Q8N441 504 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF843Q8N446 348 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 DRAM1Q8N682 238 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF645Q8N7E2 425 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 LFNGQ8NES3 379 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR2Z1Q8NG97 314 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 UBALD1Q8TB05 177 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 FAM213BQ8TBF2 198 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 FAM57AQ8TBR7 257 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 SCGB1C1Q8TD33 95 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 MRGPRDQ8TDS7 321 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 LRRC29Q8WV35 223 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 S100PBPQ96BU1 408 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 MUCL1Q96DR8 90 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 SFXN3Q9BWM7 321 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 EIF5A2Q9GZV4 153 aaKnown RBP2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 PARP12Q9H0J9 701 aaKnown RBP2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 SH3BGRL3Q9H299 93 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 SMDT1Q9H4I9 107 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 COA4Q9NYJ1 87 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 PSENENQ9NZ42 101 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 CACNG5Q9UF02 275 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 FZR1Q9UM11 496 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 RNF115Q9Y4L5 304 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 FAM215AQ9Y5M1 114 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 KPTNQ9Y664 436 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 WSB1Q9Y6I7 421 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 CACNA1CQ13936 2221 aa2.77□□□□□ -1.97
HMGB3P11-201ENST00000440127 IGLV3-9A0A075B6K5 115 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 RBFOX3A6NFN3 312 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms