RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 MLANAQ16655 118 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 C17orf58Q2M2W7 97 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 OR4A47Q6IF82 309 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 MRPL41Q8IXM3 137 aaKnown RBP11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 OCC1Q8TAD7 63 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 RND1Q92730 232 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 CCL13Q99616 98 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 TACC2O95359 2948 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 TSTD3H0UI37 97 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 PDE6DO43924 150 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 GGCTO75223 188 aaKnown RBP11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 CA2P00918 260 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 KLF3P57682 345 aaPredicted RBP11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 ACTL10Q5JWF8 245 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 KCNIP4Q6PIL6 250 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 TMEM256Q8N2U0 113 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 FAM216BQ8N7L0 139 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 OR4P4Q8NGL7 312 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 PPP1R35Q8TAP8 253 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 ASCL3Q9NQ33 180 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 TRAPPC1Q9Y5R8 145 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 TET2Q6N021 2002 aaPredicted RBP11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 GRIFINA4D1Z8 144 aa11.15□□□□□ -0.63
HERPUD1-204ENST00000439977 PRSS46E5RG02 174 aa11.15□□□□□ -0.63
HERPUD1-204ENST00000439977 NUPR1O60356 82 aa11.15□□□□□ -0.63
HERPUD1-204ENST00000439977 VENTXO95231 258 aa11.15□□□□□ -0.63
HERPUD1-204ENST00000439977 IGKV1-16P04430 117 aa11.15□□□□□ -0.63
HERPUD1-204ENST00000439977 IL6RP08887 468 aaPredicted RBP11.15□□□□□ -0.63
HERPUD1-204ENST00000439977 IGFBP2P18065 325 aa11.15□□□□□ -0.63
HERPUD1-204ENST00000439977 JOSD1Q15040 202 aaPredicted RBP11.15□□□□□ -0.63
HERPUD1-204ENST00000439977 ZNF664Q8N3J9 261 aa11.15□□□□□ -0.63
HERPUD1-204ENST00000439977 STPG3Q8N7X2 389 aa11.15□□□□□ -0.63
HERPUD1-204ENST00000439977 SFRP2Q96HF1 295 aa11.15□□□□□ -0.63
HERPUD1-204ENST00000439977 DIRC2Q96SL1 478 aa11.15□□□□□ -0.63
HERPUD1-204ENST00000439977 IMMP2LQ96T52 175 aa11.15□□□□□ -0.63
HERPUD1-204ENST00000439977 A0A1B0GV90 55 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 F6UZH7 168 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 FRMD6-AS1P0C7T7 363 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 OPRK1P41145 380 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 PKIAP61925 76 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 RPP30P78346 268 aaKnown RBP11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 FAM27E3Q08E93 113 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 EFNB3Q15768 340 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 HLA-DRB5Q30154 266 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 LRFN3Q9BTN0 628 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 YLPM1P49750 1951 aaKnown RBP11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 GATCO43716 136 aaKnown RBP11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 STAG3L2P0CL84 134 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 STAG3L3P0CL85 134 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 NPY1RP25929 384 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 RPL31P62899 125 aaKnown RBP11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 MRPS11P82912 194 aaKnown RBP11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 TRAT1Q6PIZ9 186 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 SLC24A4Q8NFF2 622 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 FAM216AQ8WUB2 273 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 NPVFQ9HCQ7 196 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 KCNIP2Q9NS61 270 aa11.14□□□□□ -0.63
HERPUD1-204ENST00000439977 DSCAMO60469 2012 aa11.13□□□□□ -0.63
HERPUD1-204ENST00000439977 SPINK4O60575 86 aa11.13□□□□□ -0.63
HERPUD1-204ENST00000439977 ASPHD1Q5U4P2 390 aa11.13□□□□□ -0.63
HERPUD1-204ENST00000439977 OR4S2Q8NH73 311 aa11.13□□□□□ -0.63
HERPUD1-204ENST00000439977 PARD6AQ9NPB6 346 aa11.13□□□□□ -0.63
HERPUD1-204ENST00000439977 MDFIC2A0A1B0GVS7 189 aa11.13□□□□□ -0.63
HERPUD1-204ENST00000439977 F2RL2O00254 374 aa11.13□□□□□ -0.63
HERPUD1-204ENST00000439977 SNRPCP09234 159 aaKnown RBP11.13□□□□□ -0.63
HERPUD1-204ENST00000439977 SRP14P37108 136 aaKnown RBP11.13□□□□□ -0.63
HERPUD1-204ENST00000439977 CNN1P51911 297 aaKnown RBP11.13□□□□□ -0.63
HERPUD1-204ENST00000439977 OR5I1Q13606 314 aa11.13□□□□□ -0.63
HERPUD1-204ENST00000439977 DDB2Q92466 427 aa11.13□□□□□ -0.63
HERPUD1-204ENST00000439977 PTPRBP23467 1997 aa11.13□□□□□ -0.63
HERPUD1-204ENST00000439977 K7EM74 188 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 CXorf1O96002 111 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 CCL8P80075 99 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 TEPPQ6URK8 271 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 MIR17HGQ75NE6 70 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 CISD2Q8N5K1 135 aaKnown RBP11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 GCM1Q9NP62 436 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 ENY2Q9NPA8 101 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 C15orf61A6NNL5 157 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 SRRM4A7MD48 611 aaKnown RBP11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 OR4A8P0C604 315 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 RNF224P0DH78 156 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 CBLN1P23435 193 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 GCHFRP30047 84 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 TIMP3P35625 211 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 MZT1Q08AG7 82 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 CSMD1Q96PZ7 3565 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 BSNQ9UPA5 3926 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 KBTBD11-OT1A0A1B0GTJ5 212 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 DVL1O14640 695 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 IGHV3-48P01763 117 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 REG1BP48304 166 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 HSPE1P61604 102 aaKnown RBP11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 IGFL2Q6UWQ7 119 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 RAB1CQ92928 201 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 IDI2-AS1Q9NZ38 188 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 TP53TG5Q9Y2B4 290 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 LSM4Q9Y4Z0 139 aaKnown RBP11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 FAM215AQ9Y5M1 114 aa11.12□□□□□ -0.63
HERPUD1-204ENST00000439977 POLEQ07864 2286 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms