RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CTXN2P0C2S0 81 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 BRS3P32247 399 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 FOXA3P55318 350 aaPredicted RBP8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 RPL30P62888 115 aaKnown RBP8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 FOXF2Q12947 444 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 C1orf194Q5T5A4 169 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 GALMQ96C23 342 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 SPG11Q96JI7 2443 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 A0A1W2PRD5 423 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 A0A1W2PRF3 423 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 A0A1W2PRM7 423 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 ODAMA1E959 279 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 J3QT63 122 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 CDX4O14627 284 aaPredicted RBP8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 RRHO14718 337 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 FOXH1O75593 365 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 CCKARP32238 428 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 LINC01551Q86U37 167 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 SFRP2Q96HF1 295 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 RCHY1Q96PM5 261 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 METRNQ9UJH8 293 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 FBXL7Q9UJT9 491 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 ANKRD11Q6UB99 2663 aaPredicted RBP8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 PSPNO60542 156 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 ZNF137PP52743 207 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 ZNF841Q6ZN19 808 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 LRTM2Q8N967 370 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 KLF14Q8TD94 323 aaPredicted RBP8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 LRFN3Q9BTN0 628 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 TPPP3Q9BW30 176 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 SMDT1Q9H4I9 107 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 POLDIP2Q9Y2S7 368 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 MPC1Q9Y5U8 109 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 LRP5LA4QPB2 252 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 IGHV1-2P23083 117 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 RPL31P62899 125 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 ACTL10Q5JWF8 245 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 COL5A1-AS1Q5SY13 56 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 TRAT1Q6PIZ9 186 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 LRRC29Q8WV35 223 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 BORCS7Q96B45 105 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 NPCDR1Q9BY65 106 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 NCOR2Q9Y618 2525 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 TMEM265A0A087WTH1 108 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 FBLL1A6NHQ2 334 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 OR5B21A6NL26 309 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 CRYBB3P26998 211 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 TIMP3P35625 211 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 PQLC2Q6ZP29 291 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 MOB3BQ86TA1 216 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 SLC24A4Q8NFF2 622 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 ACY3Q96HD9 319 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 ASCL2Q99929 193 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 TRBV20OR9-2A0A075B6H5 130 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 LINC00479Q96M42 142 aa8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 QTRT1Q9BXR0 403 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-202ENST00000439374 ADGRG4Q8IZF6 3080 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 C21orf140B9A014 251 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 CGAP01215 116 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 HBZP02008 142 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 RAB4AP20338 218 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 UQCRFS1P47985 274 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 COTL1Q14019 142 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 ZNRF1Q8ND25 227 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 BCL2L2Q92843 193 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 TECTBQ96PL2 329 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 MIEN1Q9BRT3 115 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 GNB4Q9HAV0 340 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 CLEC5AQ9NY25 188 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 RALYQ9UKM9 306 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 WASHC3Q9Y3C0 194 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 MAP1AP78559 2803 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 A0A1W2PN81 502 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 M0R1X1 148 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 HSBP1O75506 76 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 ZNF585BQ52M93 769 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 LBHQ53QV2 105 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 WDR86Q86TI4 376 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 ZCCHC24Q8N2G6 241 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 CISD2Q8N5K1 135 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 TMEM147Q9BVK8 224 aa8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 LIN7CQ9NUP9 197 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 LSM4Q9Y4Z0 139 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-202ENST00000439374 IGHV3-21A0A0B4J1V1 117 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 PSG5Q15238 335 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 PCSK4Q6UW60 755 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 S100A7AQ86SG5 101 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 HSD17B10Q99714 261 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 C12orf77C9JDV5 145 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 CCL25O15444 150 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 SMPD2O60906 423 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 CYC1P08574 325 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 MAS1LP35410 378 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 RIPPLY3P57055 190 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 BEND2Q8NDZ0 799 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 OR4A16Q8NH70 328 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 SLC35E1Q96K37 410 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 NRN1Q9NPD7 142 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 APOA2P02652 100 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms