RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ZNF320A2RRD8 509 aa13.97□□□□□ -0.17
AC004540.1-201ENST00000439120 C2orf70A6NJV1 201 aa13.97□□□□□ -0.17
AC004540.1-201ENST00000439120 XRCC3O43542 346 aa13.97□□□□□ -0.17
AC004540.1-201ENST00000439120 FOLR2P14207 255 aa13.97□□□□□ -0.17
AC004540.1-201ENST00000439120 CTRB1P17538 263 aa13.97□□□□□ -0.17
AC004540.1-201ENST00000439120 MECP2P51608 486 aaKnown RBP13.97□□□□□ -0.17
AC004540.1-201ENST00000439120 FAM106AQ4KMX7 169 aa13.97□□□□□ -0.17
AC004540.1-201ENST00000439120 UBE2NLQ5JXB2 153 aa13.97□□□□□ -0.17
AC004540.1-201ENST00000439120 CTRB2Q6GPI1 263 aa13.97□□□□□ -0.17
AC004540.1-201ENST00000439120 ZNF818PQ6ZRF7 136 aa13.97□□□□□ -0.17
AC004540.1-201ENST00000439120 FANCD2OSQ96PS1 177 aa13.97□□□□□ -0.17
AC004540.1-201ENST00000439120 NEURL2Q9BR09 285 aa13.97□□□□□ -0.17
AC004540.1-201ENST00000439120 TECRQ9NZ01 308 aaKnown RBP13.97□□□□□ -0.17
AC004540.1-201ENST00000439120 RYR3Q15413 4870 aa13.96□□□□□ -0.17
AC004540.1-201ENST00000439120 LGALS9O00182 355 aa13.96□□□□□ -0.17
AC004540.1-201ENST00000439120 MYOD1P15172 320 aa13.96□□□□□ -0.17
AC004540.1-201ENST00000439120 ERVK-16P61578 105 aa13.96□□□□□ -0.17
AC004540.1-201ENST00000439120 DEFB114Q30KQ6 69 aa13.96□□□□□ -0.17
AC004540.1-201ENST00000439120 TMEM69Q5SWH9 247 aa13.96□□□□□ -0.17
AC004540.1-201ENST00000439120 ZFAND6Q6FIF0 208 aa13.96□□□□□ -0.17
AC004540.1-201ENST00000439120 ADAMTSL5Q6ZMM2 481 aa13.96□□□□□ -0.17
AC004540.1-201ENST00000439120 GPHB5Q86YW7 130 aa13.96□□□□□ -0.17
AC004540.1-201ENST00000439120 SAMD12Q8N8I0 201 aa13.96□□□□□ -0.17
AC004540.1-201ENST00000439120 CXorf58Q96LI9 332 aa13.96□□□□□ -0.17
AC004540.1-201ENST00000439120 CCDC140Q96MF4 163 aa13.96□□□□□ -0.17
AC004540.1-201ENST00000439120 CEPT1Q9Y6K0 416 aa13.96□□□□□ -0.17
AC004540.1-201ENST00000439120 TRBV7-1A0A0A6YYK4 115 aa13.95□□□□□ -0.18
AC004540.1-201ENST00000439120 UPK2O00526 184 aa13.95□□□□□ -0.18
AC004540.1-201ENST00000439120 CYB5BO43169 146 aa13.95□□□□□ -0.18
AC004540.1-201ENST00000439120 OR2B8PP59922 312 aa13.95□□□□□ -0.18
AC004540.1-201ENST00000439120 PLEKHA2Q9HB19 425 aa13.95□□□□□ -0.18
AC004540.1-201ENST00000439120 TMEM140Q9NV12 185 aa13.95□□□□□ -0.18
AC004540.1-201ENST00000439120 COMMD9Q9P000 198 aa13.95□□□□□ -0.18
AC004540.1-201ENST00000439120 THYN1Q9P016 225 aa13.95□□□□□ -0.18
AC004540.1-201ENST00000439120 DMRT1Q9Y5R6 373 aa13.95□□□□□ -0.18
AC004540.1-201ENST00000439120 IGLV11-55A0A075B6I3 123 aa13.94□□□□□ -0.18
AC004540.1-201ENST00000439120 S1PR2O95136 353 aa13.94□□□□□ -0.18
AC004540.1-201ENST00000439120 TGFBR1P36897 503 aa13.94□□□□□ -0.18
AC004540.1-201ENST00000439120 TAS2R46P59540 309 aa13.94□□□□□ -0.18
AC004540.1-201ENST00000439120 LSM3P62310 102 aaKnown RBP13.94□□□□□ -0.18
AC004540.1-201ENST00000439120 POU2AF1Q16633 256 aa13.94□□□□□ -0.18
AC004540.1-201ENST00000439120 OR5H2Q8NGV7 314 aa13.94□□□□□ -0.18
AC004540.1-201ENST00000439120 SRSF8Q9BRL6 282 aaKnown RBP13.94□□□□□ -0.18
AC004540.1-201ENST00000439120 ZNF2Q9BSG1 426 aaPredicted RBP13.94□□□□□ -0.18
AC004540.1-201ENST00000439120 QTRT1Q9BXR0 403 aaKnown RBP13.94□□□□□ -0.18
AC004540.1-201ENST00000439120 EDA2RQ9HAV5 297 aa13.94□□□□□ -0.18
AC004540.1-201ENST00000439120 ZNF785A8K8V0 405 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 PMP2P02689 132 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 RLN1P04808 185 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 CD7P09564 240 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 RPA2P15927 270 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 EDN2P20800 178 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 CBLN1P23435 193 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 RPS19P39019 145 aaKnown RBP13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 RFX2P48378 723 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 TAS2R20P59543 309 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 SLC16A13Q7RTY0 426 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 CMTM1Q8IZ96 169 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 TSPAN14Q8NG11 270 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 CACNG8Q8WXS5 425 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 WDR89Q96FK6 387 aaPredicted RBP13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 ZC4H2Q9NQZ6 224 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 DNAH7Q8WXX0 4024 aa13.93□□□□□ -0.18
AC004540.1-201ENST00000439120 A0A087WXM4 84 aa13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 TRAV3A0A0B4J244 114 aa13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 IGLC7A0M8Q6 106 aa13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 MFSD2BA6NFX1 497 aa13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 CGB1A6NKQ9 187 aa13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 OR11H12B2RN74 326 aa13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 CLEC3BP05452 202 aa13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 GNRHRP30968 328 aa13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 GPR183P32249 361 aa13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 PRSS3P35030 304 aa13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 ZNF57Q68EA5 555 aaPredicted RBP13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 THOC7Q6I9Y2 204 aaKnown RBP13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 DEFB125Q8N687 156 aa13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 MOB3AQ96BX8 217 aa13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 SRD5A3Q9H8P0 318 aa13.92□□□□□ -0.18
AC004540.1-201ENST00000439120 MARCH11A6NNE9 402 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 A8MWP6 167 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 TNFAIP8O95379 198 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 FGF2P09038 288 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 TRAPPC2P0DI81 140 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 TRAPPC2BP0DI82 140 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 F2RP25116 425 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 KLK9Q2XQG4 91 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 PLET1Q6UQ28 207 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 DHRS11Q6UWP2 260 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 HSD17B13Q7Z5P4 300 aaPredicted RBP13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 UXS1Q8NBZ7 420 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 OR6F1Q8NGZ6 308 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 YIPF6Q96EC8 236 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 KLK9Q9UKQ9 250 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 SELENOKQ9Y6D0 94 aa13.91□□□□□ -0.18
AC004540.1-201ENST00000439120 SMIM31A0A1B0GVY4 71 aa13.9□□□□□ -0.18
AC004540.1-201ENST00000439120 TMEM213A2RRL7 107 aa13.9□□□□□ -0.18
AC004540.1-201ENST00000439120 PGLYRP1O75594 196 aaPredicted RBP13.9□□□□□ -0.18
AC004540.1-201ENST00000439120 SNAPC5O75971 98 aa13.9□□□□□ -0.18
AC004540.1-201ENST00000439120 S100GP29377 79 aa13.9□□□□□ -0.18
AC004540.1-201ENST00000439120 GDPD1Q8N9F7 314 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms