RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 Q6ZR03 302 aa11.13□□□□□ -0.63
ACTN1-204ENST00000438964 COLCA1Q6ZS62 124 aa11.13□□□□□ -0.63
ACTN1-204ENST00000438964 NIT1Q86X76 327 aa11.13□□□□□ -0.63
ACTN1-204ENST00000438964 VPS25Q9BRG1 176 aa11.13□□□□□ -0.63
ACTN1-204ENST00000438964 SF3B5Q9BWJ5 86 aaKnown RBP11.13□□□□□ -0.63
ACTN1-204ENST00000438964 PARD6GQ9BYG4 376 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-204ENST00000438964 CLEC5AQ9NY25 188 aa11.13□□□□□ -0.63
ACTN1-204ENST00000438964 METRNQ9UJH8 293 aa11.13□□□□□ -0.63
ACTN1-204ENST00000438964 ADAMTS20P59510 1910 aa11.13□□□□□ -0.63
ACTN1-204ENST00000438964 CA2P00918 260 aa11.13□□□□□ -0.63
ACTN1-204ENST00000438964 HBZP02008 142 aa11.13□□□□□ -0.63
ACTN1-204ENST00000438964 FKBP2P26885 142 aaKnown RBP11.13□□□□□ -0.63
ACTN1-204ENST00000438964 LEAP2Q969E1 77 aa11.13□□□□□ -0.63
ACTN1-204ENST00000438964 EAF1Q96JC9 268 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-204ENST00000438964 GPR179Q6PRD1 2367 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 CD99P14209 185 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 TCTAP57738 103 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 SLAQ13239 276 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 MRPL14Q6P1L8 145 aaKnown RBP11.12□□□□□ -0.63
ACTN1-204ENST00000438964 MIR17HGQ75NE6 70 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 WDR83OSQ9Y284 106 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 V9GYV3 84 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 PCNX2A6NKB5 2137 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 TANC2Q9HCD6 1990 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 BMPR1BO00238 502 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 CRYABP02511 175 aaKnown RBP11.12□□□□□ -0.63
ACTN1-204ENST00000438964 LDLRAD2Q5SZI1 272 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 UTF1Q5T230 341 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 SPATA12Q7Z6I5 190 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 LHFPL4Q7Z7J7 247 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 ARL6IP6Q8N6S5 226 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 ZNF645Q8N7E2 425 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 NINJ1Q92982 152 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 GGTLC1Q9BX51 225 aa11.12□□□□□ -0.63
ACTN1-204ENST00000438964 ZNF324O75467 553 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-204ENST00000438964 GCHFRP30047 84 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 PSG5Q15238 335 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 PRAMEF5Q5TYX0 476 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 PRAMEF6Q5VXH4 476 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 PRR27Q6MZM9 219 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 TSKUQ8WUA8 353 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 BORCS7Q96B45 105 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 GALMQ96C23 342 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 KCNS1Q96KK3 526 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 PCED1AQ9H1Q7 454 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 LNP1A1A4G5 178 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 GJE1A6NN92 205 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 CAMPP49913 170 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 GNG4P50150 75 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 UBE2V1Q13404 147 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 TRIP6Q15654 476 aaKnown RBP11.11□□□□□ -0.63
ACTN1-204ENST00000438964 SRSF7Q16629 238 aaKnown RBP eCLIP11.11□□□□□ -0.633e-14■■■■□ 24.7
ACTN1-204ENST00000438964 FBLN7Q53RD9 439 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 RNASEKQ6P5S7 137 aaKnown RBP11.11□□□□□ -0.63
ACTN1-204ENST00000438964 IMMP1LQ96LU5 166 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 COX11Q9Y6N1 276 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 CACNA1GO43497 2377 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 NAV3Q8IVL0 2385 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 YLPM1P49750 1951 aaKnown RBP11.11□□□□□ -0.63
ACTN1-204ENST00000438964 A8MXE2 369 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 KLF7O75840 302 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-204ENST00000438964 STAG3L2P0CL84 134 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 STAG3L3P0CL85 134 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 TNXAQ16473 311 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 NEUROG1Q92886 237 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 KCNIP1Q9NZI2 227 aa11.11□□□□□ -0.63
ACTN1-204ENST00000438964 SNAI2O43623 268 aa11.1□□□□□ -0.63
ACTN1-204ENST00000438964 RPL8P62917 257 aaKnown RBP11.1□□□□□ -0.63
ACTN1-204ENST00000438964 RPL39P5Q59GN2 51 aa11.1□□□□□ -0.63
ACTN1-204ENST00000438964 TMEM136Q6ZRR5 245 aa11.1□□□□□ -0.63
ACTN1-204ENST00000438964 ZNF738Q8NE65 137 aa11.1□□□□□ -0.63
ACTN1-204ENST00000438964 POM121L2Q96KW2 1035 aa11.1□□□□□ -0.63
ACTN1-204ENST00000438964 PMCHL2Q9BQD1 86 aa11.1□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A26D6RGX4 464 aa11.1□□□□□ -0.63
ACTN1-204ENST00000438964 PSG1P11464 419 aa11.1□□□□□ -0.63
ACTN1-204ENST00000438964 IGLL1P15814 213 aa11.1□□□□□ -0.63
ACTN1-204ENST00000438964 EFNB3Q15768 340 aa11.1□□□□□ -0.63
ACTN1-204ENST00000438964 MPV17L2Q567V2 206 aa11.1□□□□□ -0.63
ACTN1-204ENST00000438964 STPG3Q8N7X2 389 aa11.1□□□□□ -0.63
ACTN1-204ENST00000438964 SLC24A4Q8NFF2 622 aa11.1□□□□□ -0.63
ACTN1-204ENST00000438964 CDC42EP3Q9UKI2 254 aa11.1□□□□□ -0.63
ACTN1-204ENST00000438964 OR7C2O60412 319 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 CXorf1O96002 111 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 Q0VFX4 171 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 MLANAQ16655 118 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 ZNF718Q3SXZ3 478 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 SAPCD1Q5SSQ6 148 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 STUMQ69YW2 141 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 ZNF841Q6ZN19 808 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 HSD17B10Q99714 261 aaKnown RBP11.09□□□□□ -0.63
ACTN1-204ENST00000438964 HELTA6NFD8 242 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 IGHV3-48P01763 117 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 IGFBP2P18065 325 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 SRD5A2P31213 254 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 KLF3P57682 345 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-204ENST00000438964 PLP2Q04941 152 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 CATR1Q13166 79 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 EBLN2Q6P2I7 272 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 Q8TCH9 128 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 OR2T8A6NH00 312 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms