RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 C8orf46Q8TAG6 207 aa20.91■□□□□ 0.94
CPNE1-216ENST00000437340 H7C2Y5 167 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 C19orf84I3L1E1 186 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 PRCDQ00LT1 54 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 ACSM6Q6P461 480 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 DTX2Q86UW9 622 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 OR4C13Q8NGP0 309 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 FLYWCH2Q96CP2 140 aaKnown RBP20.9■□□□□ 0.94
CPNE1-216ENST00000437340 ABCA4P78363 2273 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 ATP5IP56385 69 aaPredicted RBP20.9■□□□□ 0.94
CPNE1-216ENST00000437340 PMS2P11Q13670 270 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 SLC24A4Q8NFF2 622 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 OR8B3Q8NGG8 313 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 OR5B3Q8NH48 314 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 TMEM170AQ8WVE7 144 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 LHX4Q969G2 390 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 TIMD4Q96H15 378 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 HARBI1Q96MB7 349 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 OR8B2Q96RD0 313 aa20.9■□□□□ 0.94
CPNE1-216ENST00000437340 SAA1P0DJI8 122 aaPredicted RBP20.89■□□□□ 0.93
CPNE1-216ENST00000437340 NPY1RP25929 384 aa20.89■□□□□ 0.93
CPNE1-216ENST00000437340 RAB13P51153 203 aa20.89■□□□□ 0.93
CPNE1-216ENST00000437340 ICAM4Q14773 271 aa20.89■□□□□ 0.93
CPNE1-216ENST00000437340 HAGHQ16775 308 aa20.89■□□□□ 0.93
CPNE1-216ENST00000437340 RPP25LQ8N5L8 163 aaKnown RBP20.89■□□□□ 0.93
CPNE1-216ENST00000437340 RAB1CQ92928 201 aa20.89■□□□□ 0.93
CPNE1-216ENST00000437340 NEIL1Q96FI4 390 aaPredicted RBP20.89■□□□□ 0.93
CPNE1-216ENST00000437340 SOD3P08294 240 aa20.88■□□□□ 0.93
CPNE1-216ENST00000437340 SOHLH1Q5JUK2 328 aa20.88■□□□□ 0.93
CPNE1-216ENST00000437340 AVPI1Q5T686 147 aa20.88■□□□□ 0.93
CPNE1-216ENST00000437340 LCN15Q6UWW0 184 aa20.88■□□□□ 0.93
CPNE1-216ENST00000437340 TGIF2LXQ8IUE1 241 aa20.88■□□□□ 0.93
CPNE1-216ENST00000437340 OR4A5Q8NH83 315 aa20.88■□□□□ 0.93
CPNE1-216ENST00000437340 SLC39A9Q9NUM3 307 aa20.88■□□□□ 0.93
CPNE1-216ENST00000437340 TET2Q6N021 2002 aaPredicted RBP20.88■□□□□ 0.93
CPNE1-216ENST00000437340 IFNA4P05014 189 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 SRP19P09132 144 aaKnown RBP20.87■□□□□ 0.93
CPNE1-216ENST00000437340 MC5RP33032 325 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 REG1BP48304 166 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 FFAR4Q5NUL3 377 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 SSX7Q7RTT5 188 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 VSTM2AQ8TAG5 236 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 PLEKHA3Q9HB20 300 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 WASHC3Q9Y3C0 194 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 FLNCQ14315 2725 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 PPIAL4CA0A0B4J2A2 164 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 CTXND1A0A1B0GTU2 59 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 LOC102723971A0A1B0GUV8 181 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 MAP1LC3B2A6NCE7 125 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 IGKV1D-33P01593 117 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 IGKV1-33P01594 117 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 RNF224P0DH78 156 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 PPIAL4GP0DN37 164 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 WDR25Q64LD2 544 aaPredicted RBP20.87■□□□□ 0.93
CPNE1-216ENST00000437340 OR10G4Q8NGN3 311 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 MAP1LC3BQ9GZQ8 125 aa20.87■□□□□ 0.93
CPNE1-216ENST00000437340 TEX50A0A1B0GTY4 177 aa20.86■□□□□ 0.93
CPNE1-216ENST00000437340 OR13C7P0DN81 318 aa20.86■□□□□ 0.93
CPNE1-216ENST00000437340 PRRX1P54821 245 aa20.86■□□□□ 0.93
CPNE1-216ENST00000437340 Q8N7P7 452 aa20.86■□□□□ 0.93
CPNE1-216ENST00000437340 OR10G9Q8NGN4 311 aa20.86■□□□□ 0.93
CPNE1-216ENST00000437340 OR10G7Q8NGN6 311 aa20.86■□□□□ 0.93
CPNE1-216ENST00000437340 IGHV2-26A0A0B4J1V2 119 aa20.85■□□□□ 0.93
CPNE1-216ENST00000437340 USF1P22415 310 aaPredicted RBP20.85■□□□□ 0.93
CPNE1-216ENST00000437340 TMEM88Q6PEY1 159 aa20.85■□□□□ 0.93
CPNE1-216ENST00000437340 TREML4Q6UXN2 200 aa20.85■□□□□ 0.93
CPNE1-216ENST00000437340 ACTR3CQ9C0K3 210 aaPredicted RBP20.85■□□□□ 0.93
CPNE1-216ENST00000437340 GNG13Q9P2W3 67 aa20.85■□□□□ 0.93
CPNE1-216ENST00000437340 hCG_1809904A0A1W2PP81 198 aa20.85■□□□□ 0.93
CPNE1-216ENST00000437340 A0A1W2PPE2 198 aa20.85■□□□□ 0.93
CPNE1-216ENST00000437340 A0A1W2PR64 198 aa20.85■□□□□ 0.93
CPNE1-216ENST00000437340 A0A1W2PRV1 198 aa20.85■□□□□ 0.93
CPNE1-216ENST00000437340 FNDC10F2Z333 226 aa20.85■□□□□ 0.93
CPNE1-216ENST00000437340 BCL2P10415 239 aa20.85■□□□□ 0.93
CPNE1-216ENST00000437340 DIAPH2-AS1Q14236 149 aa20.85■□□□□ 0.93
CPNE1-216ENST00000437340 ACOT6Q3I5F7 207 aaPredicted RBP20.85■□□□□ 0.93
CPNE1-216ENST00000437340 LY6G5BQ8NDX9 201 aa20.85■□□□□ 0.93
CPNE1-216ENST00000437340 TMEM167AQ8TBQ9 72 aa20.85■□□□□ 0.93
CPNE1-216ENST00000437340 RXFP4Q8TDU9 374 aa20.85■□□□□ 0.93
CPNE1-216ENST00000437340 CA2P00918 260 aa20.84■□□□□ 0.93
CPNE1-216ENST00000437340 IFNA1P01562 189 aa20.84■□□□□ 0.93
CPNE1-216ENST00000437340 IGLV1-47P01700 117 aa20.84■□□□□ 0.93
CPNE1-216ENST00000437340 IGFBP2P18065 325 aa20.84■□□□□ 0.93
CPNE1-216ENST00000437340 HNF4GQ14541 408 aa20.84■□□□□ 0.93
CPNE1-216ENST00000437340 HLA-DRB5Q30154 266 aa20.84■□□□□ 0.93
CPNE1-216ENST00000437340 CBLN2Q8IUK8 224 aa20.84■□□□□ 0.93
CPNE1-216ENST00000437340 BEND2Q8NDZ0 799 aa20.84■□□□□ 0.93
CPNE1-216ENST00000437340 HINT2Q9BX68 163 aa20.84■□□□□ 0.93
CPNE1-216ENST00000437340 CHODLQ9H9P2 273 aa20.84■□□□□ 0.93
CPNE1-216ENST00000437340 NPVFQ9HCQ7 196 aa20.84■□□□□ 0.93
CPNE1-216ENST00000437340 SMCO3A2RU48 225 aa20.83■□□□□ 0.93
CPNE1-216ENST00000437340 MYOD1P15172 320 aa20.83■□□□□ 0.93
CPNE1-216ENST00000437340 RPL8P62917 257 aaKnown RBP20.83■□□□□ 0.93
CPNE1-216ENST00000437340 USP9XQ93008 2570 aaPredicted RBP20.83■□□□□ 0.92
CPNE1-216ENST00000437340 MALRD1Q5VYJ5 2156 aa20.83■□□□□ 0.92
CPNE1-216ENST00000437340 MYO18BQ8IUG5 2567 aa20.82■□□□□ 0.92
CPNE1-216ENST00000437340 INS-IGF2F8WCM5 200 aa20.82■□□□□ 0.92
CPNE1-216ENST00000437340 CYB5BO43169 146 aa20.82■□□□□ 0.92
CPNE1-216ENST00000437340 OPRK1P41145 380 aa20.82■□□□□ 0.92
CPNE1-216ENST00000437340 FGF8P55075 233 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms