RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 FAM209BQ5JX69 171 aa13.46□□□□□ -0.25
PTPN13-204ENST00000436978 KIF26AQ9ULI4 1882 aaPredicted RBP13.46□□□□□ -0.25
PTPN13-204ENST00000436978 CYP2G1PQ6ZSU1 146 aa13.46□□□□□ -0.25
PTPN13-204ENST00000436978 LINC00305Q7Z4B0 112 aa13.46□□□□□ -0.25
PTPN13-204ENST00000436978 ZNRF1Q8ND25 227 aa13.46□□□□□ -0.25
PTPN13-204ENST00000436978 THSD7BQ9C0I4 1608 aa13.46□□□□□ -0.26
PTPN13-204ENST00000436978 IGLV3-12A0A075B6K2 115 aa13.46□□□□□ -0.26
PTPN13-204ENST00000436978 WDYHV1Q96HA8 205 aa13.46□□□□□ -0.26
PTPN13-204ENST00000436978 KBTBD11-OT1A0A1B0GTJ5 212 aa13.46□□□□□ -0.26
PTPN13-204ENST00000436978 IGHV1-2P23083 117 aa13.46□□□□□ -0.26
PTPN13-204ENST00000436978 ARPC1AQ92747 370 aa13.46□□□□□ -0.26
PTPN13-204ENST00000436978 H7C1H1 209 aa13.45□□□□□ -0.26
PTPN13-204ENST00000436978 IL4P05112 153 aa13.45□□□□□ -0.26
PTPN13-204ENST00000436978 ZNF56Q15929 161 aa13.45□□□□□ -0.26
PTPN13-204ENST00000436978 CFHR1Q03591 330 aa13.45□□□□□ -0.26
PTPN13-204ENST00000436978 CA2P00918 260 aa13.45□□□□□ -0.26
PTPN13-204ENST00000436978 LHX2P50458 406 aa13.45□□□□□ -0.26
PTPN13-204ENST00000436978 OR4X2Q8NGF9 303 aa13.45□□□□□ -0.26
PTPN13-204ENST00000436978 CBLN4Q9NTU7 201 aa13.45□□□□□ -0.26
PTPN13-204ENST00000436978 HIST1H2BAQ96A08 127 aa13.45□□□□□ -0.26
PTPN13-204ENST00000436978 TMEM70Q9BUB7 260 aa13.45□□□□□ -0.26
PTPN13-204ENST00000436978 PEMTQ9UBM1 199 aa13.45□□□□□ -0.26
PTPN13-204ENST00000436978 IGKV1D-33P01593 117 aa13.45□□□□□ -0.26
PTPN13-204ENST00000436978 IGKV1-33P01594 117 aa13.45□□□□□ -0.26
PTPN13-204ENST00000436978 PMCHL1Q16048 86 aa13.45□□□□□ -0.26
PTPN13-204ENST00000436978 RND3P61587 244 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 CELA3AP09093 270 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 DANCRP0C864 163 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 CD300CQ08708 224 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 OR10AG1Q8NH19 301 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 RNASEH2CQ8TDP1 164 aaKnown RBP13.44□□□□□ -0.26
PTPN13-204ENST00000436978 MOSP00540 346 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 LGALS3P17931 250 aaKnown RBP13.44□□□□□ -0.26
PTPN13-204ENST00000436978 FAM27E3Q08E93 113 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 ADIPOQQ15848 244 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 PAM16Q9Y3D7 125 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 A0A0G2JMM0 328 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 A0A1W2PPB8 328 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 A0A1W2PRS3 328 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 KIR3DP1A8MWS1 328 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 ZNHIT1O43257 154 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 OR4A47Q6IF82 309 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 MRPL14Q6P1L8 145 aaKnown RBP13.44□□□□□ -0.26
PTPN13-204ENST00000436978 MRPL18Q9H0U6 180 aaKnown RBP13.44□□□□□ -0.26
PTPN13-204ENST00000436978 PRSS8Q16651 343 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 GATAD1Q8WUU5 269 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 NABP2Q9BQ15 211 aa13.44□□□□□ -0.26
PTPN13-204ENST00000436978 ALKBH7Q9BT30 221 aaPredicted RBP13.44□□□□□ -0.26
PTPN13-204ENST00000436978 KLF4O43474 513 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 PLAURQ03405 335 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 TMEM105Q8N8V8 129 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 FMC1Q96HJ9 113 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 IGKV3D-15A0A087WSY6 115 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 IGKV3-15P01624 115 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 JOSD1Q15040 202 aaPredicted RBP13.43□□□□□ -0.26
PTPN13-204ENST00000436978 C2orf83Q53S99 150 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 SFRP2Q96HF1 295 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 RPL39P5Q59GN2 51 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 TMEM101Q96IK0 257 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 A0A0B4J293 547 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 PQLC2LA1A4F0 135 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 C17orf100A8MU93 164 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 UMODP07911 640 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 PLSCR2Q9NRY7 297 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 DOCK7Q96N67 2140 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 MYO7BQ6PIF6 2116 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 C2orf88Q9BSF0 95 aa13.43□□□□□ -0.26
PTPN13-204ENST00000436978 REPIN1Q9BWE0 567 aaKnown RBP13.43□□□□□ -0.26
PTPN13-204ENST00000436978 PIN1P1O15428 100 aa13.42□□□□□ -0.26
PTPN13-204ENST00000436978 SRSF12Q8WXF0 261 aaKnown RBP13.42□□□□□ -0.26
PTPN13-204ENST00000436978 IGLV3-32A0A0A0MS00 114 aa13.42□□□□□ -0.26
PTPN13-204ENST00000436978 RBFOX2O43251 390 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTPN13-204ENST00000436978 LINC00114Q6XXX2 140 aa13.42□□□□□ -0.26
PTPN13-204ENST00000436978 PPP1R27Q86WC6 154 aa13.42□□□□□ -0.26
PTPN13-204ENST00000436978 PLXNA2O75051 1894 aa13.42□□□□□ -0.26
PTPN13-204ENST00000436978 PLXNA4Q9HCM2 1894 aa13.42□□□□□ -0.26
PTPN13-204ENST00000436978 CD69Q07108 199 aa13.42□□□□□ -0.26
PTPN13-204ENST00000436978 ABLIM2Q6H8Q1 611 aa13.42□□□□□ -0.26
PTPN13-204ENST00000436978 SGK494Q96LW2 274 aa13.42□□□□□ -0.26
PTPN13-204ENST00000436978 NPIPB9F8W1W9 429 aa13.42□□□□□ -0.26
PTPN13-204ENST00000436978 HIST1H1AQ02539 215 aaPredicted RBP13.42□□□□□ -0.26
PTPN13-204ENST00000436978 LOC102723996A0A087X1L8 192 aa13.42□□□□□ -0.26
PTPN13-204ENST00000436978 AGAP20933 346 aa13.42□□□□□ -0.26
PTPN13-204ENST00000436978 SMUG1Q53HV7 270 aa13.42□□□□□ -0.26
PTPN13-204ENST00000436978 GEMIN7Q9H840 131 aaKnown RBP13.42□□□□□ -0.26
PTPN13-204ENST00000436978 PAX1P15863 534 aa13.41□□□□□ -0.26
PTPN13-204ENST00000436978 DOCK9Q9BZ29 2069 aa13.41□□□□□ -0.26
PTPN13-204ENST00000436978 VDAC2P45880 294 aaPredicted RBP13.41□□□□□ -0.26
PTPN13-204ENST00000436978 DNLZQ5SXM8 178 aa13.41□□□□□ -0.26
PTPN13-204ENST00000436978 IGHV3OR16-10A0A075B7F0 116 aa13.41□□□□□ -0.26
PTPN13-204ENST00000436978 LEPROTL1O95214 131 aa13.41□□□□□ -0.26
PTPN13-204ENST00000436978 GPX4P36969 197 aaPredicted RBP13.41□□□□□ -0.26
PTPN13-204ENST00000436978 ZNF660Q6AZW8 331 aaPredicted RBP13.41□□□□□ -0.26
PTPN13-204ENST00000436978 GOLT1AQ6ZVE7 132 aa13.41□□□□□ -0.26
PTPN13-204ENST00000436978 SH3BGRL3Q9H299 93 aa13.41□□□□□ -0.26
PTPN13-204ENST00000436978 CEACAM4O75871 244 aa13.41□□□□□ -0.26
PTPN13-204ENST00000436978 FBLL1A6NHQ2 334 aaKnown RBP13.41□□□□□ -0.26
PTPN13-204ENST00000436978 EFEMP2O95967 443 aa13.41□□□□□ -0.26
PTPN13-204ENST00000436978 UQCRFS1P47985 274 aa13.41□□□□□ -0.26
PTPN13-204ENST00000436978 CD8AP01732 235 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms