RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	SELENOV	P59797	346 aa		13.19	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CDPF1	Q6NVV7	123 aa		13.19	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	TMEM183A	Q8IXX5	376 aa		13.19	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	NUP37	Q8NFH4	326 aa		13.19	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	HIST1H2BL	Q99880	126 aa		13.19	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	UBE2G2	P60604	165 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	FAM27E3	Q08E93	113 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	PDZD11	Q5EBL8	140 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	OR2T10	Q8NGZ9	312 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	FAM57A	Q8TBR7	257 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	EP300	Q09472	2414 aa	Predicted RBP	13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145		K7EM74	188 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	NDUFB4	O95168	129 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	HIST1H1B	P16401	226 aa	Known RBP	13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CCKAR	P32238	428 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	LCN2	P80188	198 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	ACTL10	Q5JWF8	245 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CST9LP1	Q5W188	147 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	SLC25A48	Q6ZT89	311 aa	Known RBP	13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	LYG1	Q8N1E2	194 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	IMMP2L	Q96T52	175 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CCL13	Q99616	98 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	DERL1	Q9BUN8	251 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	ZNF257	Q9Y2Q1	563 aa		13.18	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	ZNF318	Q5VUA4	2279 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	MMP23A	O75900	390 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CA2	P00918	260 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	FABP4	P15090	132 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	TNFSF4	P23510	183 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	RPL29	P47914	159 aa	Known RBP	13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	NUBP1	P53384	320 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	KRTCAP3	Q53RY4	240 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	TEPP	Q6URK8	271 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	TMEM144	Q7Z5S9	345 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	FAM216B	Q8N7L0	139 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	PRDM13	Q9H4Q3	707 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	PRND	Q9UKY0	176 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	TANC2	Q9HCD6	1990 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145		A0A1W2PPQ1	181 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	PDLIM4	P50479	330 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	PRR20E	P86478	221 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	PRR20C	P86479	221 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	PRR20D	P86480	221 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	PRR20B	P86481	221 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	PRR20A	P86496	221 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CISD2	Q8N5K1	135 aa	Known RBP	13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	STPG3	Q8N7X2	389 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	NEUROG1	Q92886	237 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CHODL	Q9H9P2	273 aa		13.17	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	TRBV20OR9-2	A0A075B6H5	130 aa		13.16	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CT45A6	P0DMU7	189 aa		13.16	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CT45A5	P0DMU8	189 aa		13.16	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CT45A7	P0DMV0	189 aa		13.16	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	EFNB3	Q15768	340 aa		13.16	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	ZNF114	Q8NC26	417 aa		13.16	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	DEFB108B	Q8NET1	73 aa		13.16	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	OR1P1	Q8NH06	330 aa		13.16	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.16	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	SSMEM1	Q8WWF3	244 aa		13.16	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	ACY3	Q96HD9	319 aa		13.16	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	PACRG	Q96M98	296 aa	Predicted RBP	13.16	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	OR51B2	Q9Y5P1	312 aa		13.16	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	SVIL	O95425	2214 aa		13.16	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	TRAV20	A0A0B4J274	112 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	UPK2	O00526	184 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	BMP5	P22003	454 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	GCHFR	P30047	84 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	CHRNA7	P36544	502 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	PRCD	Q00LT1	54 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	KCNIP4	Q6PIL6	250 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	ENY2	Q9NPA8	101 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	SPEN	Q96T58	3664 aa	Known RBP	13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	LINC00869	P0C866	280 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	MYOD1	P15172	320 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	GNG10	P50151	68 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	RHOB	P62745	196 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	C11orf52	Q96A22	123 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	SEPSECS	Q9HD40	501 aa	Known RBP	13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	DCAF16	Q9NXF7	216 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	LINC00312	Q9Y6C7	94 aa		13.15	□□□□□ -0.3
HLA-DQB2-231	ENST00000435145	AMBP	P02760	352 aa		13.14	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	C1QTNF9	P0C862	333 aa		13.14	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	ATP5I	P56385	69 aa	Predicted RBP	13.14	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	FOXL1	Q12952	345 aa		13.14	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	RAB31	Q13636	194 aa		13.14	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	SPATA31B1P	Q5VZV4	182 aa		13.14	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	BTF3L4	Q96K17	158 aa		13.14	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	PFDN5	Q99471	154 aa		13.14	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	TMEM204	Q9BSN7	226 aa		13.14	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	SCO2	A0A1W2PP80	73 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	hADV38S2	A0JD32	116 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	SRRM4	A7MD48	611 aa	Known RBP	13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	IL3RA	P26951	378 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	RPL15	P61313	204 aa	Known RBP	13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	RTL8B	Q17RB0	113 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	CLEC12B	Q2HXU8	276 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	FAM209B	Q5JX69	171 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms