RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 LGALS7P47929 136 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 UBE2KP61086 200 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 RELBQ01201 579 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 OR2F1Q13607 317 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 RUSC1-AS1Q66K80 236 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 ACOT7LQ6ZUV0 252 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 ZNF429Q86V71 674 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 PIP4P2Q8N4L2 257 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.04□□□□□ -0.96
LINC00539-203ENST00000434601 OR4A5Q8NH83 315 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 C17orf50Q8WW18 174 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 AQP10Q96PS8 301 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 JMJD8Q96S16 334 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 RAB40CQ96S21 281 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 TSNAXQ99598 290 aaKnown RBP9.04□□□□□ -0.96
LINC00539-203ENST00000434601 RNF5Q99942 180 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 CACFD1Q9UGQ2 172 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 PRNDQ9UKY0 176 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 FOXA2Q9Y261 457 aaPredicted RBP9.04□□□□□ -0.96
LINC00539-203ENST00000434601 A0A0D9SG52 128 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 MSGN1A6NI15 193 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 CHST1O43916 411 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 SPDEFO95238 335 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 IGKV1D-33P01593 117 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 IGKV1-33P01594 117 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 IL6RP08887 468 aaPredicted RBP9.03□□□□□ -0.96
LINC00539-203ENST00000434601 PAX6P26367 422 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 P2RY1P47900 373 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 AP2S1P53680 142 aaPredicted RBP9.03□□□□□ -0.96
LINC00539-203ENST00000434601 TMUB2Q71RG4 321 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 KCNRGQ8N5I3 272 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 OR52E5Q8NH55 327 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 TMEM167AQ8TBQ9 72 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 AJUBAQ96IF1 538 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 RBKSQ9H477 322 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 TMEM14BQ9NUH8 114 aa9.03□□□□□ -0.96
LINC00539-203ENST00000434601 CEBPZOSA8MTT3 80 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 TRIM77I1YAP6 450 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 KCNAB3O43448 404 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 SLC25A17O43808 307 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 GPR137BO60478 399 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 MOSP00540 346 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 AVPP01185 164 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 IFNA17P01571 189 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 SNRNP70P08621 437 aaKnown RBP9.02□□□□□ -0.97
LINC00539-203ENST00000434601 HKR1P10072 659 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 IAPPP10997 89 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 RPL12P30050 165 aaKnown RBP9.02□□□□□ -0.97
LINC00539-203ENST00000434601 S100A11P31949 105 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 COMPP49747 757 aaPredicted RBP9.02□□□□□ -0.97
LINC00539-203ENST00000434601 SPCS3P61009 180 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 RPL23AP62750 156 aaKnown RBP9.02□□□□□ -0.97
LINC00539-203ENST00000434601 PDLIM3Q53GG5 364 aaPredicted RBP9.02□□□□□ -0.97
LINC00539-203ENST00000434601 KLF17Q5JT82 389 aaPredicted RBP9.02□□□□□ -0.97
LINC00539-203ENST00000434601 BRD3OSQ6XYD6 125 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 OR2C3Q8N628 320 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 TEX45Q8NA69 505 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 OR2T10Q8NGZ9 312 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 SGMS2Q8NHU3 365 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 EAF1Q96JC9 268 aaPredicted RBP9.02□□□□□ -0.97
LINC00539-203ENST00000434601 RITA1Q96K30 269 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 ARL6Q9H0F7 186 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 ZC4H2Q9NQZ6 224 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 LYRM2Q9NU23 88 aaPredicted RBP9.02□□□□□ -0.97
LINC00539-203ENST00000434601 FKBP11Q9NYL4 201 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 NUP50Q9UKX7 468 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 TCF19Q9Y242 345 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 WSB1Q9Y6I7 421 aa9.02□□□□□ -0.97
LINC00539-203ENST00000434601 BCL2L11O43521 198 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 TSC22D2O75157 780 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 TMEM50AO95807 157 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 CRYGBP07316 175 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 FGF2P09038 288 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 CNTFRP26992 372 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 BRS3P32247 399 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 CAV2P51636 162 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 PAX9P55771 341 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 TAS2R30P59541 319 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 RPL8P62917 257 aaKnown RBP9.01□□□□□ -0.97
LINC00539-203ENST00000434601 EWSR1Q01844 656 aaKnown RBP eCLIP9.01□□□□□ -0.97
LINC00539-203ENST00000434601 HES1Q14469 280 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 OPCMLQ14982 345 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 PSG5Q15238 335 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 SPINK9Q5DT21 86 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 C3orf56Q8N813 242 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 DTD1Q8TEA8 209 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 ZDHHC16Q969W1 377 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 SMIM8Q96KF7 97 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 CIB3Q96Q77 187 aaPredicted RBP9.01□□□□□ -0.97
LINC00539-203ENST00000434601 CLCC1Q96S66 551 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 SLC25A31Q9H0C2 315 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 TPSG1Q9NRR2 321 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 METTL1Q9UBP6 276 aaKnown RBP9.01□□□□□ -0.97
LINC00539-203ENST00000434601 ZNF257Q9Y2Q1 563 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 OR51B2Q9Y5P1 312 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 MGAM2Q2M2H8 2515 aa9.01□□□□□ -0.97
LINC00539-203ENST00000434601 A0A0U1RQK1 487 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 KANTRA0A1W2PQU2 76 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 IGSF23A1L1A6 192 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 FAM24AA6NFZ4 105 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms