RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 A0A0J9YWU9 116 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 MFSD2BA6NFX1 497 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 UBE2CO00762 179 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 SPRY2O43597 315 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 MYOD1P15172 320 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 ATF4P18848 351 aaPredicted RBP11.09□□□□□ -0.63
PRKDC-203ENST00000432581 GNG2P59768 71 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 MSMO1Q15800 293 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 ZNF585BQ52M93 769 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 CEMP1Q6PRD7 247 aaPredicted RBP11.09□□□□□ -0.63
PRKDC-203ENST00000432581 UNQ9165/PRO28630Q6UXU0 137 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 OR2C3Q8N628 320 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 NUDCD2Q8WVJ2 157 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 SPAG8Q99932 426 aaPredicted RBP11.09□□□□□ -0.63
PRKDC-203ENST00000432581 C5orf66Q9H5L9 145 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 BET1LQ9NYM9 111 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 THYN1Q9P016 225 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 ANXA10Q9UJ72 324 aa11.09□□□□□ -0.63
PRKDC-203ENST00000432581 KLK5Q9Y337 293 aaPredicted RBP11.09□□□□□ -0.63
PRKDC-203ENST00000432581 TMEM235A6NFC5 223 aa11.08□□□□□ -0.64
PRKDC-203ENST00000432581 REG1AP05451 166 aa11.08□□□□□ -0.64
PRKDC-203ENST00000432581 GPR183P32249 361 aa11.08□□□□□ -0.64
PRKDC-203ENST00000432581 TIMM50Q3ZCQ8 353 aa11.08□□□□□ -0.64
PRKDC-203ENST00000432581 PLET1Q6UQ28 207 aa11.08□□□□□ -0.64
PRKDC-203ENST00000432581 LYG2Q86SG7 212 aa11.08□□□□□ -0.64
PRKDC-203ENST00000432581 ZNF502Q8TBZ5 544 aa11.08□□□□□ -0.64
PRKDC-203ENST00000432581 SRSF8Q9BRL6 282 aaKnown RBP11.08□□□□□ -0.64
PRKDC-203ENST00000432581 HRASLSQ9HDD0 168 aa11.08□□□□□ -0.64
PRKDC-203ENST00000432581 KIR2DL5BA0A0G2JN68 375 aa11.07□□□□□ -0.64
PRKDC-203ENST00000432581 KIR2DL5BA0A0G2JPC4 375 aa11.07□□□□□ -0.64
PRKDC-203ENST00000432581 CGB1A6NKQ9 187 aa11.07□□□□□ -0.64
PRKDC-203ENST00000432581 NOTOA8MTQ0 251 aa11.07□□□□□ -0.64
PRKDC-203ENST00000432581 CYB5BO43169 146 aa11.07□□□□□ -0.64
PRKDC-203ENST00000432581 RBFOX2O43251 390 aaKnown RBP eCLIP11.07□□□□□ -0.64
PRKDC-203ENST00000432581 PTBP1P26599 531 aaKnown RBP eCLIP11.07□□□□□ -0.64
PRKDC-203ENST00000432581 OR2B8PP59922 312 aa11.07□□□□□ -0.64
PRKDC-203ENST00000432581 C22orf42Q6IC83 251 aa11.07□□□□□ -0.64
PRKDC-203ENST00000432581 NR2C2APQ86WQ0 139 aa11.07□□□□□ -0.64
PRKDC-203ENST00000432581 KIR2DL5AQ8N109 375 aa11.07□□□□□ -0.64
PRKDC-203ENST00000432581 TMEM217Q8N7C4 229 aa11.07□□□□□ -0.64
PRKDC-203ENST00000432581 ZBTB34Q8NCN2 500 aa11.07□□□□□ -0.64
PRKDC-203ENST00000432581 KIR2DL5BQ8NHK3 375 aa11.07□□□□□ -0.64
PRKDC-203ENST00000432581 ZNF436Q9C0F3 470 aaPredicted RBP11.07□□□□□ -0.64
PRKDC-203ENST00000432581 BLOC1S6Q9UL45 172 aa11.07□□□□□ -0.64
PRKDC-203ENST00000432581 IGLC7A0M8Q6 106 aa11.06□□□□□ -0.64
PRKDC-203ENST00000432581 TSPAN4O14817 238 aa11.06□□□□□ -0.64
PRKDC-203ENST00000432581 SSX5O60225 188 aa11.06□□□□□ -0.64
PRKDC-203ENST00000432581 FGF2P09038 288 aa11.06□□□□□ -0.64
PRKDC-203ENST00000432581 TAS2R31P59538 309 aa11.06□□□□□ -0.64
PRKDC-203ENST00000432581 ARPC4P59998 168 aa11.06□□□□□ -0.64
PRKDC-203ENST00000432581 EWSR1Q01844 656 aaKnown RBP eCLIP11.06□□□□□ -0.64
PRKDC-203ENST00000432581 DEFB135Q30KP9 77 aa11.06□□□□□ -0.64
PRKDC-203ENST00000432581 LAMTOR1Q6IAA8 161 aa11.06□□□□□ -0.64
PRKDC-203ENST00000432581 SPAG16Q8N0X2 631 aa11.06□□□□□ -0.64
PRKDC-203ENST00000432581 STPG3Q8N7X2 389 aa11.06□□□□□ -0.64
PRKDC-203ENST00000432581 VN1R17PQ8TDU5 208 aa11.06□□□□□ -0.64
PRKDC-203ENST00000432581 SECTM1Q8WVN6 248 aa11.06□□□□□ -0.64
PRKDC-203ENST00000432581 TMEM190Q8WZ59 177 aa11.06□□□□□ -0.64
PRKDC-203ENST00000432581 COMMD5Q9GZQ3 224 aa11.06□□□□□ -0.64
PRKDC-203ENST00000432581 IGHV3-35A0A0C4DH35 117 aa11.05□□□□□ -0.64
PRKDC-203ENST00000432581 TGOLN2O43493 480 aa11.05□□□□□ -0.64
PRKDC-203ENST00000432581 TNFSF12O43508 249 aa11.05□□□□□ -0.64
PRKDC-203ENST00000432581 NQO2P16083 231 aa11.05□□□□□ -0.64
PRKDC-203ENST00000432581 CATR1Q13166 79 aa11.05□□□□□ -0.64
PRKDC-203ENST00000432581 POU2AF1Q16633 256 aa11.05□□□□□ -0.64
PRKDC-203ENST00000432581 THOC7Q6I9Y2 204 aaKnown RBP11.05□□□□□ -0.64
PRKDC-203ENST00000432581 NRG4Q8WWG1 115 aa11.05□□□□□ -0.64
PRKDC-203ENST00000432581 RNF183Q96D59 192 aa11.05□□□□□ -0.64
PRKDC-203ENST00000432581 GPHA2Q96T91 129 aa11.05□□□□□ -0.64
PRKDC-203ENST00000432581 QTRT1Q9BXR0 403 aaKnown RBP11.05□□□□□ -0.64
PRKDC-203ENST00000432581 DAZ1Q9NQZ3 744 aaKnown RBP11.05□□□□□ -0.64
PRKDC-203ENST00000432581 CCL28Q9NRJ3 127 aa11.05□□□□□ -0.64
PRKDC-203ENST00000432581 SMIM30A4D0T7 59 aa11.04□□□□□ -0.64
PRKDC-203ENST00000432581 UPK2O00526 184 aa11.04□□□□□ -0.64
PRKDC-203ENST00000432581 HPRT1P00492 218 aa11.04□□□□□ -0.64
PRKDC-203ENST00000432581 FCGR2CP31995 323 aa11.04□□□□□ -0.64
PRKDC-203ENST00000432581 HSD17B13Q7Z5P4 300 aaPredicted RBP11.04□□□□□ -0.64
PRKDC-203ENST00000432581 TPRA1Q86W33 373 aa11.04□□□□□ -0.64
PRKDC-203ENST00000432581 BEST4Q8NFU0 473 aa11.04□□□□□ -0.64
PRKDC-203ENST00000432581 OR13F1Q8NGS4 319 aa11.04□□□□□ -0.64
PRKDC-203ENST00000432581 BSCL2Q96G97 398 aaPredicted RBP11.04□□□□□ -0.64
PRKDC-203ENST00000432581 UBQLN2Q9UHD9 624 aa11.04□□□□□ -0.64
PRKDC-203ENST00000432581 DAPK2Q9UIK4 370 aa11.04□□□□□ -0.64
PRKDC-203ENST00000432581 KMT2AQ03164 3969 aa11.04□□□□□ -0.64
PRKDC-203ENST00000432581 FRAS1Q86XX4 4008 aa11.03□□□□□ -0.64
PRKDC-203ENST00000432581 OR4C46A6NHA9 309 aa11.03□□□□□ -0.64
PRKDC-203ENST00000432581 SULT1C2O00338 296 aa11.03□□□□□ -0.64
PRKDC-203ENST00000432581 PPYP01298 95 aa11.03□□□□□ -0.64
PRKDC-203ENST00000432581 FGF9P31371 208 aaPredicted RBP11.03□□□□□ -0.64
PRKDC-203ENST00000432581 ODF3L2Q3SX64 289 aa11.03□□□□□ -0.64
PRKDC-203ENST00000432581 SPSB3Q6PJ21 355 aa11.03□□□□□ -0.64
PRKDC-203ENST00000432581 GDPD1Q8N9F7 314 aa11.03□□□□□ -0.64
PRKDC-203ENST00000432581 CD300LFQ8TDQ1 290 aa11.03□□□□□ -0.64
PRKDC-203ENST00000432581 ATP6V0BQ99437 205 aa11.03□□□□□ -0.64
PRKDC-203ENST00000432581 TMEM140Q9NV12 185 aa11.03□□□□□ -0.64
PRKDC-203ENST00000432581 RHBDL2Q9NX52 303 aa11.03□□□□□ -0.64
PRKDC-203ENST00000432581 TRAV3A0A0B4J244 114 aa11.02□□□□□ -0.65
PRKDC-203ENST00000432581 OR2T8A6NH00 312 aa11.02□□□□□ -0.65
PRKDC-203ENST00000432581 NDUFA4O00483 81 aa11.02□□□□□ -0.65
PRKDC-203ENST00000432581 HSPA13P48723 471 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms