RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 GBGT1Q8N5D6 347 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 OR4C12Q96R67 309 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 PLXND1Q9Y4D7 1925 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 CRISP2P16562 243 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 COL8A2P25067 703 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 PRSS8Q16651 343 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 DMRTC2Q8IXT2 367 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-207ENST00000429896 ELF5Q9UKW6 265 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-207ENST00000429896 CLDN34H7C241 214 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 COMPP49747 757 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-207ENST00000429896 C21orf62-AS1Q17RA5 79 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 ZNF525Q8N782 197 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 OPN4Q9UHM6 478 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 APCSP02743 223 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 RSPO3Q9BXY4 272 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-207ENST00000429896 A0A1W2PRX2 142 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 F12P00748 615 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-207ENST00000429896 ID1P41134 155 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 RPL27AP46776 148 aaKnown RBP10.8□□□□□ -0.68
PTCH1-207ENST00000429896 HERVK_113P61574 105 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 OR10G8Q8NGN5 311 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 S4R3C0 116 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 MMP9P14780 707 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 MMD2Q8IY49 270 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 DCTN5Q9BTE1 182 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 MFSD2BA6NFX1 497 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 J3QR06 171 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 OTX1P32242 354 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-207ENST00000429896 TMEM50BP56557 158 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 PRB3Q04118 309 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-207ENST00000429896 STXBP6Q8NFX7 210 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 H0Y980 276 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 TFF1P04155 84 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 GRNP28799 593 aaKnown RBP10.8□□□□□ -0.68
PTCH1-207ENST00000429896 AWAT1Q58HT5 328 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 PLPPR1Q8TBJ4 325 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 METTL26Q96S19 204 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 SEC11CQ9BY50 192 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 KLK15Q9H2R5 256 aa10.8□□□□□ -0.68
PTCH1-207ENST00000429896 CGAP01215 116 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 CCL3L1P16619 93 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 CBLN2Q8IUK8 224 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 HIGD1AQ9Y241 93 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 PAM16Q9Y3D7 125 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 TMEM131Q92545 1883 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 DUXBA0A1W2PPF3 345 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 IGSF23A1L1A6 192 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 UNQ5815/PRO19632Q6UWF5 114 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 VN1R17PQ8TDU5 208 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 IGHV3OR16-13A0A075B7E8 117 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 IGHV3-74A0A0B4J1X5 117 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 A0A1B0GU03 582 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 AP4M1O00189 453 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 PGLYRP1O75594 196 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-207ENST00000429896 NTF4P34130 210 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 C19orf54Q5BKX5 351 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 AMMECR1LQ6DCA0 310 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 ALX4Q9H161 411 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-207ENST00000429896 NAT8Q9UHE5 227 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 IGLV1-44P01699 117 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 RIGQ13278 110 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 RNF212Q495C1 297 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 PRSS54Q6PEW0 395 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 ITLN2Q8WWU7 325 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-207ENST00000429896 SNURFLB1AK76 121 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 LINC01356Q8N9X3 169 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 OR4C13Q8NGP0 309 aa10.79□□□□□ -0.68
PTCH1-207ENST00000429896 MRPL30Q8TCC3 161 aaKnown RBP10.79□□□□□ -0.68
PTCH1-207ENST00000429896 TMEM262E9PQX1 116 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 LILRA1O75019 489 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 TMEM167BQ9NRX6 74 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 C5orf63A6NC05 138 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 EFNB3Q15768 340 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 KHDC3LQ587J8 217 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 BPESC1Q9GZL8 116 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 SHISA3A0PJX4 238 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 SLC25A17O43808 307 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 EWSR1Q01844 656 aaKnown RBP eCLIP10.78□□□□□ -0.68
PTCH1-207ENST00000429896 BSXQ3C1V8 233 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 EBLN2Q6P2I7 272 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 MIEN1Q9BRT3 115 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 HIST1H1EP10412 219 aaKnown RBP10.78□□□□□ -0.68
PTCH1-207ENST00000429896 ZNF25P17030 456 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-207ENST00000429896 RPL8P62917 257 aaKnown RBP10.78□□□□□ -0.68
PTCH1-207ENST00000429896 UTRNP46939 3433 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 LY6HO94772 140 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 ZP1P60852 638 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 FAM74A4Q5TZK3 123 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 WDR25Q64LD2 544 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-207ENST00000429896 CENPVQ7Z7K6 275 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-207ENST00000429896 VKORC1L1Q8N0U8 176 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-207ENST00000429896 TMEM133Q9H2Q1 129 aa10.78□□□□□ -0.68
PTCH1-207ENST00000429896 IGHV3-49A0A0A0MS15 119 aa10.77□□□□□ -0.68
PTCH1-207ENST00000429896 MBPP02686 304 aaPredicted RBP10.77□□□□□ -0.68
PTCH1-207ENST00000429896 Q96MF0 132 aa10.77□□□□□ -0.68
PTCH1-207ENST00000429896 DUX5Q96PT3 197 aa10.77□□□□□ -0.68
PTCH1-207ENST00000429896 CEP192Q8TEP8 1941 aa10.77□□□□□ -0.69
PTCH1-207ENST00000429896 RNF223E7ERA6 249 aa10.77□□□□□ -0.69
PTCH1-207ENST00000429896 HSPB1P04792 205 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms