RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 COMMD9Q9P000 198 aa13.83□□□□□ -0.2
SSR4P1-202ENST00000429427 KLK9Q9UKQ9 250 aa13.83□□□□□ -0.2
SSR4P1-202ENST00000429427 ZNF257Q9Y2Q1 563 aa13.83□□□□□ -0.2
SSR4P1-202ENST00000429427 IGLC7A0M8Q6 106 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 CD3DP04234 171 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 REG1AP05451 166 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 SPNP16150 400 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 CTRB1P17538 263 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 ZP3P21754 424 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 PSMB6P28072 239 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 SYNJ2BPP57105 145 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 C15orf32Q32M92 178 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 CTRB2Q6GPI1 263 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 NECAP1Q8NC96 275 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 CD300LFQ8TDQ1 290 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 BORCS5Q969J3 196 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 B9D2Q9BPU9 175 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 ZMAT5Q9UDW3 170 aaKnown RBP13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 MTFP1Q9UDX5 166 aa13.82□□□□□ -0.2
SSR4P1-202ENST00000429427 STAB2Q8WWQ8 2551 aa13.81□□□□□ -0.2
SSR4P1-202ENST00000429427 MARCH11A6NNE9 402 aa13.81□□□□□ -0.2
SSR4P1-202ENST00000429427 NDUFB8O95169 186 aa13.81□□□□□ -0.2
SSR4P1-202ENST00000429427 LPAR6P43657 344 aa13.81□□□□□ -0.2
SSR4P1-202ENST00000429427 RPL5P46777 297 aaKnown RBP13.81□□□□□ -0.2
SSR4P1-202ENST00000429427 TMBIM6P55061 237 aa13.81□□□□□ -0.2
SSR4P1-202ENST00000429427 UCP3P55916 312 aa13.81□□□□□ -0.2
SSR4P1-202ENST00000429427 TSPAN5P62079 268 aa13.81□□□□□ -0.2
SSR4P1-202ENST00000429427 ATP5G2Q06055 141 aa13.81□□□□□ -0.2
SSR4P1-202ENST00000429427 LHFPL1Q86WI0 220 aa13.81□□□□□ -0.2
SSR4P1-202ENST00000429427 CCDC59Q9P031 241 aaKnown RBP13.81□□□□□ -0.2
SSR4P1-202ENST00000429427 HUWE1Q7Z6Z7 4374 aaKnown RBP13.81□□□□□ -0.2
SSR4P1-202ENST00000429427 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 H3BMQ9 156 aa13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 TPPPO94811 219 aa13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 IGKV1-39P01597 117 aa13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 IGLV1-51P01701 117 aa13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 IGKV1D-39P04432 117 aa13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 TBC1D26Q86UD7 250 aa13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 SLC25A42Q86VD7 318 aa13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 CMTM1Q8IZ96 169 aa13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 DMBX1Q8NFW5 382 aa13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 OR10W1Q8NGF6 305 aa13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 OR9G4Q8NGQ1 327 aa13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 CCDC140Q96MF4 163 aa13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 AIFM2Q9BRQ8 373 aa13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 S4R3C0 116 aa13.8□□□□□ -0.2
SSR4P1-202ENST00000429427 IGLV11-55A0A075B6I3 123 aa13.79□□□□□ -0.2
SSR4P1-202ENST00000429427 DBX1A6NMT0 343 aa13.79□□□□□ -0.2
SSR4P1-202ENST00000429427 RGS5O15539 181 aa13.79□□□□□ -0.2
SSR4P1-202ENST00000429427 KRASP01116 189 aa13.79□□□□□ -0.2
SSR4P1-202ENST00000429427 CD74P04233 296 aa13.79□□□□□ -0.2
SSR4P1-202ENST00000429427 FGF2P09038 288 aa13.79□□□□□ -0.2
SSR4P1-202ENST00000429427 G6PCP35575 357 aa13.79□□□□□ -0.2
SSR4P1-202ENST00000429427 ADAMTSL5Q6ZMM2 481 aa13.79□□□□□ -0.2
SSR4P1-202ENST00000429427 MRGPRFQ96AM1 343 aa13.79□□□□□ -0.2
SSR4P1-202ENST00000429427 ISOC1Q96CN7 298 aa13.79□□□□□ -0.2
SSR4P1-202ENST00000429427 BCL7BQ9BQE9 202 aa13.79□□□□□ -0.2
SSR4P1-202ENST00000429427 SLIRPQ9GZT3 109 aaKnown RBP13.79□□□□□ -0.2
SSR4P1-202ENST00000429427 FBXL7Q9UJT9 491 aa13.79□□□□□ -0.2
SSR4P1-202ENST00000429427 NSG2Q9Y328 171 aa13.79□□□□□ -0.2
SSR4P1-202ENST00000429427 TEX50A0A1B0GTY4 177 aa13.78□□□□□ -0.2
SSR4P1-202ENST00000429427 PPP5D1E7EU14 171 aa13.78□□□□□ -0.2
SSR4P1-202ENST00000429427 LY86O95711 162 aa13.78□□□□□ -0.2
SSR4P1-202ENST00000429427 IGHV3-23P01764 117 aa13.78□□□□□ -0.2
SSR4P1-202ENST00000429427 HLA-AP01891 365 aaKnown RBP13.78□□□□□ -0.2
SSR4P1-202ENST00000429427 CSN3P07498 182 aa13.78□□□□□ -0.2
SSR4P1-202ENST00000429427 PI3P19957 117 aa13.78□□□□□ -0.2
SSR4P1-202ENST00000429427 WT1-ASQ06250 92 aa13.78□□□□□ -0.2
SSR4P1-202ENST00000429427 RNASE10Q5GAN6 216 aaKnown RBP13.78□□□□□ -0.2
SSR4P1-202ENST00000429427 SLC38A6Q8IZM9 456 aa13.78□□□□□ -0.2
SSR4P1-202ENST00000429427 OR4C12Q96R67 309 aa13.78□□□□□ -0.2
SSR4P1-202ENST00000429427 QTRT1Q9BXR0 403 aaKnown RBP13.78□□□□□ -0.2
SSR4P1-202ENST00000429427 TENM3Q9P273 2699 aa13.78□□□□□ -0.2
SSR4P1-202ENST00000429427 DPPA5A6NC42 116 aa13.77□□□□□ -0.21
SSR4P1-202ENST00000429427 MFSD2BA6NFX1 497 aa13.77□□□□□ -0.21
SSR4P1-202ENST00000429427 GABARAPH6UMI1 98 aa13.77□□□□□ -0.21
SSR4P1-202ENST00000429427 GP9P14770 177 aa13.77□□□□□ -0.21
SSR4P1-202ENST00000429427 EDN2P20800 178 aa13.77□□□□□ -0.21
SSR4P1-202ENST00000429427 CD69Q07108 199 aa13.77□□□□□ -0.21
SSR4P1-202ENST00000429427 RPEL1Q2QD12 228 aa13.77□□□□□ -0.21
SSR4P1-202ENST00000429427 FAAP20Q6NZ36 180 aa13.77□□□□□ -0.21
SSR4P1-202ENST00000429427 CADM3Q8N126 398 aa13.77□□□□□ -0.21
SSR4P1-202ENST00000429427 TMEM229BQ8NBD8 167 aa13.77□□□□□ -0.21
SSR4P1-202ENST00000429427 SEC22AQ96IW7 307 aa13.77□□□□□ -0.21
SSR4P1-202ENST00000429427 COMMD5Q9GZQ3 224 aa13.77□□□□□ -0.21
SSR4P1-202ENST00000429427 CEPT1Q9Y6K0 416 aa13.77□□□□□ -0.21
SSR4P1-202ENST00000429427 TBPP20226 339 aa13.76□□□□□ -0.21
SSR4P1-202ENST00000429427 MFAP2P55001 183 aa13.76□□□□□ -0.21
SSR4P1-202ENST00000429427 ERVK-16P61578 105 aa13.76□□□□□ -0.21
SSR4P1-202ENST00000429427 LPCAT3Q6P1A2 487 aa13.76□□□□□ -0.21
SSR4P1-202ENST00000429427 ARRDC1Q8N5I2 433 aa13.76□□□□□ -0.21
SSR4P1-202ENST00000429427 OR6Q1Q8NGQ2 317 aa13.76□□□□□ -0.21
SSR4P1-202ENST00000429427 SMIM4Q8WVI0 70 aa13.76□□□□□ -0.21
SSR4P1-202ENST00000429427 ELOVL1Q9BW60 279 aa13.76□□□□□ -0.21
SSR4P1-202ENST00000429427 NDUFA4L2Q9NRX3 87 aa13.76□□□□□ -0.21
SSR4P1-202ENST00000429427 FAM212BQ9NTI7 297 aaPredicted RBP13.76□□□□□ -0.21
SSR4P1-202ENST00000429427 PTBP1P26599 531 aaKnown RBP eCLIP13.75□□□□□ -0.21
SSR4P1-202ENST00000429427 PPP5CP53041 499 aa13.75□□□□□ -0.21
SSR4P1-202ENST00000429427 RND3P61587 244 aa13.75□□□□□ -0.21
SSR4P1-202ENST00000429427 DCTN2Q13561 401 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms