RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ARV1Q9H2C2 271 aa7.64□□□□□ -1.19
HMGCLL1-206ENST00000428842 PARP11Q9NR21 331 aa7.64□□□□□ -1.19
HMGCLL1-206ENST00000428842 SLC35D1Q9NTN3 355 aa7.64□□□□□ -1.19
HMGCLL1-206ENST00000428842 PRELID3BQ9Y3B1 194 aa7.64□□□□□ -1.19
HMGCLL1-206ENST00000428842 hCG_1809904A0A1W2PP81 198 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 A0A1W2PPE2 198 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 A0A1W2PPH5 198 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 A0A1W2PR64 198 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 A0A1W2PRV1 198 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 LINC01548A6NM66 108 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 H3BP45 60 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 K7EPK0 472 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 SLC25A17O43808 307 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 JTBO76095 146 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 SNAPINO95295 136 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 LY6G6DO95868 133 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 IFNA21P01568 189 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 CD5P06127 495 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 SNRNP70P08621 437 aaKnown RBP7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 DEFB112Q30KQ8 113 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 LIAT1Q6ZQX7 453 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 FAM71E2Q8N5Q1 922 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 ZDHHC16Q969W1 377 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 ZNF48Q96MX3 618 aaPredicted RBP7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 S1PR3Q99500 378 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 FAM103A1Q9BTL3 118 aaKnown RBP7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 PLEKHA2Q9HB19 425 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 TREM1Q9NP99 234 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 DPM3Q9P2X0 92 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 FBXL17Q9UF56 701 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 LINC00527Q9UJ94 153 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 IGHV1-69DA0A0B4J2H0 117 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 MARCH11A6NNE9 402 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 CDS2O95674 445 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 IGHV1-69P01742 117 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 NPBWR1P48145 328 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 UBE2E1P51965 193 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 PRRX1P54821 245 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 SMCO1Q147U7 214 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 GPR157Q5UAW9 335 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 PRSS57Q6UWY2 283 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 UBAC2Q8NBM4 344 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 DMBX1Q8NFW5 382 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 RNASE11Q8TAA1 199 aaKnown RBP7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 GPR146Q96CH1 333 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 FBXL15Q9H469 300 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 TMEM231Q9H6L2 316 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 CACNG5Q9UF02 275 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 POMT1Q9Y6A1 747 aa7.63□□□□□ -1.19
HMGCLL1-206ENST00000428842 H0Y980 276 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 FBXO24O75426 580 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 MED6O75586 246 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 IGHV4-59P01825 116 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 UCP1P25874 307 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 RAB7AP51149 207 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 CYB5R2Q6BCY4 276 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 TMEM88Q6PEY1 159 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 SPNS3Q6ZMD2 512 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 CFHR4Q92496 578 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 C18orf12Q96KH6 178 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 RHOVQ96L33 236 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 HARBI1Q96MB7 349 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 HINT2Q9BX68 163 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 HRH4Q9H3N8 390 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 KCNIP3Q9Y2W7 256 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 POLR3KQ9Y2Y1 108 aaPredicted RBP7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 INAFM1C9JVW0 142 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 E5RGE8 158 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 RBMXL2O75526 392 aaKnown RBP7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 MBPP02686 304 aaPredicted RBP7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 REG1AP05451 166 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 SAA1P0DJI8 122 aaPredicted RBP7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 GNB1P62873 340 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 HABP2Q14520 560 aaPredicted RBP7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 CBLN2Q8IUK8 224 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 CCDC71LQ8N9Z2 235 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 BEND2Q8NDZ0 799 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 OR10W1Q8NGF6 305 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 ZNF596Q8TC21 504 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 PIFOQ8TCI5 191 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 R3HDM4Q96D70 268 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 GAB2Q9UQC2 676 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 FAM96BQ9Y3D0 163 aa7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 LSM5Q9Y4Y9 91 aaKnown RBP7.62□□□□□ -1.19
HMGCLL1-206ENST00000428842 NCBP2LA6PVI3 153 aaKnown RBP7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 H3BUX3 64 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 VENTXO95231 258 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 OR4A47Q6IF82 309 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 HSD17B10Q99714 261 aaKnown RBP7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 QTRT1Q9BXR0 403 aaKnown RBP7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 UNKLQ9H9P5 680 aaKnown RBP7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 TRAV20A0A0B4J274 112 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 A0A1B0GW64 132 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 TMEM50AO95807 157 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 IGHV3-48P01763 117 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 IAPPP10997 89 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 PVALBP20472 110 aaPredicted RBP7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 RND3P61587 244 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 POLR2GP62487 172 aaKnown RBP eCLIP7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 TMEM95Q3KNT9 176 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms