RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 WFDC1Q9HC57 220 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 STRAPQ9Y3F4 350 aaKnown RBP7□□□□□ -1.29
HDAC1-202ENST00000428704 A0A0G2JRQ6 117 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 LOC100996750A0A140TA64 210 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 TMEM218A2RU14 115 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 FAM24AA6NFZ4 105 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 ZNF705EA8MWA4 302 aaPredicted RBP6.99□□□□□ -1.29
HDAC1-202ENST00000428704 TXNL1O43396 289 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 CHST1O43916 411 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 LY86O95711 162 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 TMEM50AO95807 157 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 CRYZL1O95825 349 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 IGKV1-5P01602 117 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 LPAR6P43657 344 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 CAV2P51636 162 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 PROK1P58294 105 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 RPL23AP62750 156 aaKnown RBP6.99□□□□□ -1.29
HDAC1-202ENST00000428704 MORN2Q502X0 79 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 ZNF788Q6ZQV5 615 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 Q6ZRM9 215 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 ODF3L1Q8IXM7 274 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 SPAG16Q8N0X2 631 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 PRR18Q8N4B5 295 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 OR51H1Q8NH63 302 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 LINC01006Q8NI28 216 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 GAFA1Q96PS6 74 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 GPHA2Q96T91 129 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 KRTAP4-6Q9BYQ5 205 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 PARP12Q9H0J9 701 aaKnown RBP6.99□□□□□ -1.29
HDAC1-202ENST00000428704 RPUSD1Q9UJJ7 312 aaKnown RBP6.99□□□□□ -1.29
HDAC1-202ENST00000428704 TENM2Q9NT68 2774 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 NOTCH3Q9UM47 2321 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 DSCAML1Q8TD84 2053 aa6.99□□□□□ -1.29
HDAC1-202ENST00000428704 IGSF23A1L1A6 192 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 FAM90A9PA6NNJ1 464 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 UMAD1C9J7I0 102 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 WRBO00258 174 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 RAB29O14966 203 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 RBFOX2O43251 390 aaKnown RBP eCLIP6.98□□□□□ -1.29
HDAC1-202ENST00000428704 SYNGR2O43760 224 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 MED6O75586 246 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 DFFBO76075 338 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 OR8U8P0C7N1 319 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 SULT1A1P50225 295 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 F2RL1P55085 397 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 BRWD1-AS2P59051 145 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 CD69Q07108 199 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 AARDQ4LEZ3 155 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 PXDC1Q5TGL8 231 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 BRD3OSQ6XYD6 125 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-202ENST00000428704 LY6G5BQ8NDX9 201 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 BPIFCQ8NFQ6 507 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 OR10A7Q8NGE5 316 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 GNPNAT1Q96EK6 184 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-202ENST00000428704 MISP3Q96FF7 219 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 BSCL2Q96G97 398 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-202ENST00000428704 PCGF1Q9BSM1 259 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 PARD6GQ9BYG4 376 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-202ENST00000428704 OR2D2Q9H210 308 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 CACFD1Q9UGQ2 172 aa6.98□□□□□ -1.29
HDAC1-202ENST00000428704 CENPVL3A0A0U1RRI6 287 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 KBTBD11-OT1A0A1B0GTJ5 212 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 A0A1B0GW64 132 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 ZNF729A6NN14 1252 aaPredicted RBP6.97□□□□□ -1.29
HDAC1-202ENST00000428704 C3orf84H3BNL1 204 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 SIGLEC5O15389 551 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 SSSCA1O60232 199 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 PROP1O75360 226 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 TOX4O94842 621 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 SCAF4O95104 1147 aaKnown RBP6.97□□□□□ -1.29
HDAC1-202ENST00000428704 CD5P06127 495 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 LIPFP07098 398 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 SSTR5P35346 364 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 PPP1CCP36873 323 aaKnown RBP6.97□□□□□ -1.29
HDAC1-202ENST00000428704 RAB7AP51149 207 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 ARF6P62330 175 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 RPL30P62888 115 aaKnown RBP6.97□□□□□ -1.29
HDAC1-202ENST00000428704 C17orf58Q2M2W7 97 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 DEFB112Q30KQ8 113 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 Q3ZCU0 254 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 DEFB121Q5J5C9 76 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 Q8N7P7 452 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 C8orf46Q8TAG6 207 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 C5orf30Q96GV9 206 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 DCTN5Q9BTE1 182 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 SMIM3Q9BZL3 60 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 SMDT1Q9H4I9 107 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 PRDM13Q9H4Q3 707 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.97□□□□□ -1.29
HDAC1-202ENST00000428704 HSPB7Q9UBY9 170 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 CACNG5Q9UF02 275 aa6.97□□□□□ -1.29
HDAC1-202ENST00000428704 CARHSP1Q9Y2V2 147 aaKnown RBP6.97□□□□□ -1.29
HDAC1-202ENST00000428704 NKX6-3A6NJ46 265 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 NDUFB3O43676 98 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 HPRT1P00492 218 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 DUTP33316 252 aaKnown RBP6.96□□□□□ -1.3
HDAC1-202ENST00000428704 KIR2DS2P43631 304 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 AKR1C2P52895 323 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 DLX1P56177 255 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms