RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 C7orf50Q9BRJ6 194 aaKnown RBP11.41□□□□□ -0.58
SGCE-204ENST00000428696 KLK15Q9H2R5 256 aa11.41□□□□□ -0.58
SGCE-204ENST00000428696 FLVCR2Q9UPI3 526 aa11.41□□□□□ -0.58
SGCE-204ENST00000428696 IGKV1-39P01597 117 aa11.4□□□□□ -0.58
SGCE-204ENST00000428696 IGHG4P01861 327 aa11.4□□□□□ -0.58
SGCE-204ENST00000428696 IGKV1D-39P04432 117 aa11.4□□□□□ -0.58
SGCE-204ENST00000428696 OR9G9P0C7N8 305 aa11.4□□□□□ -0.58
SGCE-204ENST00000428696 ANXA3P12429 323 aa11.4□□□□□ -0.58
SGCE-204ENST00000428696 MAS1LP35410 378 aa11.4□□□□□ -0.58
SGCE-204ENST00000428696 SSBP2P81877 361 aaPredicted RBP11.4□□□□□ -0.58
SGCE-204ENST00000428696 DHODHQ02127 395 aa11.4□□□□□ -0.58
SGCE-204ENST00000428696 C2orf68Q2NKX9 166 aa11.4□□□□□ -0.58
SGCE-204ENST00000428696 TMEM268Q5VZI3 342 aa11.4□□□□□ -0.58
SGCE-204ENST00000428696 NDUFA11Q86Y39 141 aa11.4□□□□□ -0.58
SGCE-204ENST00000428696 CENPSQ8N2Z9 138 aa11.4□□□□□ -0.58
SGCE-204ENST00000428696 WIPF2Q8TF74 440 aaPredicted RBP11.4□□□□□ -0.58
SGCE-204ENST00000428696 TMEM230Q96A57 120 aa11.4□□□□□ -0.58
SGCE-204ENST00000428696 FAM212BQ9NTI7 297 aaPredicted RBP11.4□□□□□ -0.58
SGCE-204ENST00000428696 OR51B2Q9Y5P1 312 aa11.4□□□□□ -0.58
SGCE-204ENST00000428696 PLXNB1O43157 2135 aa11.4□□□□□ -0.58
SGCE-204ENST00000428696 B3GALNT1O75752 331 aa11.39□□□□□ -0.59
SGCE-204ENST00000428696 NDUFB6O95139 128 aa11.39□□□□□ -0.59
SGCE-204ENST00000428696 TRGV3P03979 118 aa11.39□□□□□ -0.59
SGCE-204ENST00000428696 REG1AP05451 166 aa11.39□□□□□ -0.59
SGCE-204ENST00000428696 ELANEP08246 267 aa11.39□□□□□ -0.59
SGCE-204ENST00000428696 PPIFP30405 207 aaKnown RBP11.39□□□□□ -0.59
SGCE-204ENST00000428696 RAB9AP51151 201 aa11.39□□□□□ -0.59
SGCE-204ENST00000428696 MECP2P51608 486 aaKnown RBP11.39□□□□□ -0.59
SGCE-204ENST00000428696 TPPP2P59282 170 aa11.39□□□□□ -0.59
SGCE-204ENST00000428696 POU2AF1Q16633 256 aa11.39□□□□□ -0.59
SGCE-204ENST00000428696 MZT2BQ6NZ67 158 aa11.39□□□□□ -0.59
SGCE-204ENST00000428696 MINDY2Q8NBR6 621 aa11.39□□□□□ -0.59
SGCE-204ENST00000428696 KLHL30-AS1Q8NEE0 82 aa11.39□□□□□ -0.59
SGCE-204ENST00000428696 GLYATL2Q8WU03 294 aa11.39□□□□□ -0.59
SGCE-204ENST00000428696 SEC22AQ96IW7 307 aa11.39□□□□□ -0.59
SGCE-204ENST00000428696 TMEM222Q9H0R3 208 aa11.39□□□□□ -0.59
SGCE-204ENST00000428696 TEX50A0A1B0GTY4 177 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 FAM240BA0A1B0GVZ2 78 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 E7EUB6 86 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 SOX15O60248 233 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 UPK1BO75841 260 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 TSPAN15O95858 294 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 PRH1P02810 166 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 TRAPPC2P0DI81 140 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 TRAPPC2BP0DI82 140 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 UCP1P25874 307 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 RAB25P57735 213 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 CFHR3Q02985 330 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 TMEM128Q5BJH2 165 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 C18orf65Q6ZTR6 163 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 SELENOHQ8IZQ5 122 aaKnown RBP11.38□□□□□ -0.59
SGCE-204ENST00000428696 OR5M8Q8NGP6 311 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 TSC22D3Q99576 134 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 ZFP57Q9NU63 452 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 FKBP11Q9NYL4 201 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 PRNDQ9UKY0 176 aa11.38□□□□□ -0.59
SGCE-204ENST00000428696 TRAV6A0A075B6T7 132 aa11.37□□□□□ -0.59
SGCE-204ENST00000428696 CDS2O95674 445 aa11.37□□□□□ -0.59
SGCE-204ENST00000428696 IFNA17P01571 189 aa11.37□□□□□ -0.59
SGCE-204ENST00000428696 IGKV1-5P01602 117 aa11.37□□□□□ -0.59
SGCE-204ENST00000428696 IL6RP08887 468 aaPredicted RBP11.37□□□□□ -0.59
SGCE-204ENST00000428696 DEFA4P12838 97 aa11.37□□□□□ -0.59
SGCE-204ENST00000428696 ANXA7P20073 488 aaKnown RBP11.37□□□□□ -0.59
SGCE-204ENST00000428696 PSMB8P28062 276 aa11.37□□□□□ -0.59
SGCE-204ENST00000428696 RPL23AP62750 156 aaKnown RBP11.37□□□□□ -0.59
SGCE-204ENST00000428696 C4orf46Q504U0 113 aa11.37□□□□□ -0.59
SGCE-204ENST00000428696 ASPHD1Q5U4P2 390 aa11.37□□□□□ -0.59
SGCE-204ENST00000428696 OR10W1Q8NGF6 305 aa11.37□□□□□ -0.59
SGCE-204ENST00000428696 OR1L8Q8NGR8 309 aa11.37□□□□□ -0.59
SGCE-204ENST00000428696 RBPMSQ93062 196 aaKnown RBP11.37□□□□□ -0.59
SGCE-204ENST00000428696 DUX3Q96PT4 197 aa11.37□□□□□ -0.59
SGCE-204ENST00000428696 QTRT1Q9BXR0 403 aaKnown RBP11.37□□□□□ -0.59
SGCE-204ENST00000428696 IGLV1-40P01703 118 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 IGHV3-11P01762 117 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 AREGP15514 252 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 BTCP35070 178 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 CRIP2P52943 208 aaPredicted RBP11.36□□□□□ -0.59
SGCE-204ENST00000428696 SUPT4H1P63272 117 aaKnown RBP11.36□□□□□ -0.59
SGCE-204ENST00000428696 DEFA5Q01523 94 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 PPP1R1AQ13522 171 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 TMEM187Q14656 261 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 SPINK9Q5DT21 86 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 C8orf86Q6ZUL3 223 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 SLC25A42Q86VD7 318 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 LGI3Q8N145 548 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 OR4F17Q8NGA8 305 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 LHFPL5Q8TAF8 219 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 TMEM68Q96MH6 324 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 OR4F4Q96R69 305 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 PDCD10Q9BUL8 212 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 ZNF580Q9UK33 172 aa11.36□□□□□ -0.59
SGCE-204ENST00000428696 C13orf42A0A1B0GVH6 325 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 DBX1A6NMT0 343 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 TEX22C9J3V5 150 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 PF4P02776 101 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 TCRBP04435 133 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 OR13C7P0DN81 318 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 C19orf54Q5BKX5 351 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 C19orf35Q6ZS72 473 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 LYZL2Q7Z4W2 148 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms