RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 TAS2R8Q9NYW2 309 aa13.56□□□□□ -0.24
UPK3BP1-201ENST00000428678 PDCD5O14737 125 aa13.55□□□□□ -0.24
UPK3BP1-201ENST00000428678 HRASP01112 189 aa13.55□□□□□ -0.24
UPK3BP1-201ENST00000428678 CTXN2P0C2S0 81 aa13.55□□□□□ -0.24
UPK3BP1-201ENST00000428678 HLA-GP17693 338 aa13.55□□□□□ -0.24
UPK3BP1-201ENST00000428678 MLLT11Q13015 90 aaPredicted RBP13.55□□□□□ -0.24
UPK3BP1-201ENST00000428678 ODF3L2Q3SX64 289 aa13.55□□□□□ -0.24
UPK3BP1-201ENST00000428678 OGFRL1Q5TC84 451 aaPredicted RBP13.55□□□□□ -0.24
UPK3BP1-201ENST00000428678 ZNF502Q8TBZ5 544 aa13.55□□□□□ -0.24
UPK3BP1-201ENST00000428678 ATG5Q9H1Y0 275 aa13.55□□□□□ -0.24
UPK3BP1-201ENST00000428678 CGB1A6NKQ9 187 aa13.54□□□□□ -0.24
UPK3BP1-201ENST00000428678 IFITM5A6NNB3 132 aa13.54□□□□□ -0.24
UPK3BP1-201ENST00000428678 TSPAN4O14817 238 aa13.54□□□□□ -0.24
UPK3BP1-201ENST00000428678 BRWD1-AS2P59051 145 aa13.54□□□□□ -0.24
UPK3BP1-201ENST00000428678 SSX1Q16384 188 aa13.54□□□□□ -0.24
UPK3BP1-201ENST00000428678 MFSD4AQ8N468 514 aa13.54□□□□□ -0.24
UPK3BP1-201ENST00000428678 GPHA2Q96T91 129 aa13.54□□□□□ -0.24
UPK3BP1-201ENST00000428678 KIAA1109Q2LD37 5005 aa13.53□□□□□ -0.24
UPK3BP1-201ENST00000428678 S1PR2O95136 353 aa13.53□□□□□ -0.24
UPK3BP1-201ENST00000428678 RPA2P15927 270 aa13.53□□□□□ -0.24
UPK3BP1-201ENST00000428678 FCGR2BP31994 310 aaPredicted RBP13.53□□□□□ -0.24
UPK3BP1-201ENST00000428678 EIF4EBP1Q13541 118 aaPredicted RBP13.53□□□□□ -0.24
UPK3BP1-201ENST00000428678 ARL6IP1Q15041 203 aa13.53□□□□□ -0.24
UPK3BP1-201ENST00000428678 CDNFQ49AH0 187 aa13.53□□□□□ -0.24
UPK3BP1-201ENST00000428678 LAMTOR1Q6IAA8 161 aa13.53□□□□□ -0.24
UPK3BP1-201ENST00000428678 TMEM190Q8WZ59 177 aa13.53□□□□□ -0.24
UPK3BP1-201ENST00000428678 ZNF436Q9C0F3 470 aaPredicted RBP13.53□□□□□ -0.24
UPK3BP1-201ENST00000428678 CCDC90BQ9GZT6 254 aa13.53□□□□□ -0.24
UPK3BP1-201ENST00000428678 VCXQ9H320 206 aa13.53□□□□□ -0.24
UPK3BP1-201ENST00000428678 HRASLSQ9HDD0 168 aa13.53□□□□□ -0.24
UPK3BP1-201ENST00000428678 TPRKBQ9Y3C4 175 aa13.53□□□□□ -0.24
UPK3BP1-201ENST00000428678 RYR1P21817 5038 aa13.52□□□□□ -0.24
UPK3BP1-201ENST00000428678 OR4C46A6NHA9 309 aa13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 TGOLN2O43493 480 aa13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 RGS10O43665 173 aa13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 OR2B8PP59922 312 aa13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 TIMM50Q3ZCQ8 353 aa13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 CNIH2Q6PI25 160 aa13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 ZNF66Q6ZN08 573 aa13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 OR5B3Q8NH48 314 aa13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 OR4A5Q8NH83 315 aa13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 NUDCD2Q8WVJ2 157 aa13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 GALNT14Q96FL9 552 aa13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 MGLLQ99685 303 aa13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 MAP6D1Q9H9H5 199 aa13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 DAZ1Q9NQZ3 744 aaKnown RBP13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 THYN1Q9P016 225 aa13.52□□□□□ -0.25
UPK3BP1-201ENST00000428678 TRAV1-2A0A0B4J238 106 aa13.51□□□□□ -0.25
UPK3BP1-201ENST00000428678 IGLC7A0M8Q6 106 aa13.51□□□□□ -0.25
UPK3BP1-201ENST00000428678 OR2T8A6NH00 312 aa13.51□□□□□ -0.25
UPK3BP1-201ENST00000428678 EBAG9O00559 213 aa13.51□□□□□ -0.25
UPK3BP1-201ENST00000428678 TNFSF12O43508 249 aa13.51□□□□□ -0.25
UPK3BP1-201ENST00000428678 MYL9P24844 172 aa13.51□□□□□ -0.25
UPK3BP1-201ENST00000428678 PTBP1P26599 531 aaKnown RBP eCLIP13.51□□□□□ -0.25
UPK3BP1-201ENST00000428678 HACD4Q5VWC8 232 aa13.51□□□□□ -0.25
UPK3BP1-201ENST00000428678 DCSTAMPQ9H295 470 aa13.51□□□□□ -0.25
UPK3BP1-201ENST00000428678 BET1LQ9NYM9 111 aa13.51□□□□□ -0.25
UPK3BP1-201ENST00000428678 FBXL17Q9UF56 701 aa13.51□□□□□ -0.25
UPK3BP1-201ENST00000428678 VPS13DQ5THJ4 4388 aa13.5□□□□□ -0.25
UPK3BP1-201ENST00000428678 CASQ2O14958 399 aaPredicted RBP13.5□□□□□ -0.25
UPK3BP1-201ENST00000428678 RAB3BP20337 219 aa13.5□□□□□ -0.25
UPK3BP1-201ENST00000428678 NANOS2P60321 138 aaKnown RBP13.5□□□□□ -0.25
UPK3BP1-201ENST00000428678 AIFM2Q9BRQ8 373 aa13.5□□□□□ -0.25
UPK3BP1-201ENST00000428678 C20orf24Q9BUV8 137 aa13.5□□□□□ -0.25
UPK3BP1-201ENST00000428678 C6orf62Q9GZU0 229 aaPredicted RBP13.5□□□□□ -0.25
UPK3BP1-201ENST00000428678 DUSP21Q9H596 190 aa13.5□□□□□ -0.25
UPK3BP1-201ENST00000428678 IGHV3OR16-8A0A075B7F1 116 aa13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 CYB5BO43169 146 aa13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 ZNF207O43670 478 aaKnown RBP13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 IFNA4P05014 189 aa13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 RBMS2Q15434 407 aaKnown RBP13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 APRG1Q8IVJ8 170 aa13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 SPAG16Q8N0X2 631 aa13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 C11orf45Q8TAV5 145 aa13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 CD300LFQ8TDQ1 290 aa13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 VN1R17PQ8TDU5 208 aa13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 GATAD1Q8WUU5 269 aa13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 SECTM1Q8WVN6 248 aa13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 COMMD5Q9GZQ3 224 aa13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 MFFQ9GZY8 342 aa13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 ANXA10Q9UJ72 324 aa13.49□□□□□ -0.25
UPK3BP1-201ENST00000428678 TRAV3A0A0B4J244 114 aa13.48□□□□□ -0.25
UPK3BP1-201ENST00000428678 TMEM235A6NFC5 223 aa13.48□□□□□ -0.25
UPK3BP1-201ENST00000428678 CTSDP07339 412 aaPredicted RBP13.48□□□□□ -0.25
UPK3BP1-201ENST00000428678 GNG2P59768 71 aa13.48□□□□□ -0.25
UPK3BP1-201ENST00000428678 PRR20EP86478 221 aa13.48□□□□□ -0.25
UPK3BP1-201ENST00000428678 PRR20CP86479 221 aa13.48□□□□□ -0.25
UPK3BP1-201ENST00000428678 PRR20DP86480 221 aa13.48□□□□□ -0.25
UPK3BP1-201ENST00000428678 PRR20BP86481 221 aa13.48□□□□□ -0.25
UPK3BP1-201ENST00000428678 PRR20AP86496 221 aa13.48□□□□□ -0.25
UPK3BP1-201ENST00000428678 OR10W1Q8NGF6 305 aa13.48□□□□□ -0.25
UPK3BP1-201ENST00000428678 BSCL2Q96G97 398 aaPredicted RBP13.48□□□□□ -0.25
UPK3BP1-201ENST00000428678 RARRES2Q99969 163 aa13.48□□□□□ -0.25
UPK3BP1-201ENST00000428678 DNAH6Q9C0G6 4158 aa13.48□□□□□ -0.25
UPK3BP1-201ENST00000428678 SMIM30A4D0T7 59 aa13.47□□□□□ -0.25
UPK3BP1-201ENST00000428678 NDUFA4O00483 81 aa13.47□□□□□ -0.25
UPK3BP1-201ENST00000428678 UPK2O00526 184 aa13.47□□□□□ -0.25
UPK3BP1-201ENST00000428678 SLC25A24Q6NUK1 477 aa13.47□□□□□ -0.25
UPK3BP1-201ENST00000428678 PRSS48Q7RTY5 328 aa13.47□□□□□ -0.25
UPK3BP1-201ENST00000428678 GDPD1Q8N9F7 314 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms