RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 NBR2O15453 112 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 RBFOX2O43251 390 aaKnown RBP eCLIP8.42□□□□□ -1.068e-6■■□□□ 11.5
CLTCL1-202ENST00000427926 LMX1BO60663 402 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 C8orf88P0DMB2 117 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 EFNB2P52799 333 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 FBLIM1Q8WUP2 373 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 AQP3Q92482 292 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 TMEM222Q9H0R3 208 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 ZNF256Q9Y2P7 627 aaPredicted RBP8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 A0A1W2PP11 408 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 SMIM10L1P0DMW3 83 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 ZFP36L1Q07352 338 aaKnown RBP8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 PHYHIPLQ96FC7 376 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 SMIM10Q96HG1 83 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 ZIC3O60481 467 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 NANOS3P60323 173 aaKnown RBP8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 TMEM177Q53S58 311 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 NUDT10Q8NFP7 164 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 CDC42EP3Q9UKI2 254 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 TMEM238LA0A1B0GVL6 79 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 A6NJY4 79 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 ERVH48-1M5A8F1 160 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 CD74P04233 296 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 SCGB1A1P11684 91 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 ZNF79Q15937 498 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 IBA57Q5T440 356 aaKnown RBP8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 SRSF12Q8WXF0 261 aaKnown RBP8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 KLK15Q9H2R5 256 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 HSF4Q9ULV5 492 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 SCN10AQ9Y5Y9 1956 aa8.42□□□□□ -1.06
CLTCL1-202ENST00000427926 SIPA1L1O43166 1804 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 IGHV3OR16-8A0A075B7F1 116 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 KBTBD11-OT1A0A1B0GTJ5 212 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 MRPS18AQ9NVS2 196 aaKnown RBP8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 MRPS18CQ9Y3D5 142 aaKnown RBP8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 CDX1P47902 265 aaPredicted RBP8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 NMUP48645 174 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 SERF2P84101 59 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 MBNL2Q5VZF2 373 aaKnown RBP8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 DPPA3Q6W0C5 159 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 LOC102724200A0A096LPH7 203 aaPredicted RBP8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 SLC17A3O00476 420 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 RPL24P83731 157 aaKnown RBP8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 GOLT1AQ6ZVE7 132 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 AQP10Q96PS8 301 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 TOMM7Q9P0U1 55 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 AHCTF1Q8WYP5 2266 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 M0R381 172 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 DUSP14O95147 198 aaKnown RBP8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 IL18BPO95998 194 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 MMP9P14780 707 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 RNASE4P34096 147 aaKnown RBP8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 NPBWR2P48146 333 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 ZNF880Q6PDB4 577 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 OR9G4Q8NGQ1 327 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 SDF2L1Q9HCN8 221 aa8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 SOX21Q9Y651 276 aaPredicted RBP8.41□□□□□ -1.06
CLTCL1-202ENST00000427926 PLA2G10O15496 165 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 ERVK11-1P61568 191 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 FAM90A1Q86YD7 464 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 C9orf62Q8N4C0 152 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 FAM24BQ8N5W8 94 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 VWCEQ96DN2 955 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 C2orf88Q9BSF0 95 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 FAM206AQ9NX38 181 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 MIA3Q5JRA6 1907 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 ATP6V0CP27449 155 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 TIMP3P35625 211 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 TCTAP57738 103 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 PRB3Q04118 309 aaPredicted RBP8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 LINC01356Q8N9X3 169 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 TNFSF18Q9UNG2 199 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 FAM90A26D6RGX4 464 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 LEPP41159 167 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 PSG7Q13046 419 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 POC1AQ8NBT0 407 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 MBD3L1Q8WWY6 194 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 PGLYRP4Q96LB8 373 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 AMELYQ99218 206 aa8.4□□□□□ -1.06
CLTCL1-202ENST00000427926 C4orf51C9J302 202 aa8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 E9PQ18 207 aa8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 CELA3BP08861 270 aa8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 IL6RP08887 468 aaPredicted RBP8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 LHX2P50458 406 aa8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 TCF24Q7RTU0 167 aa8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 ZCCHC24Q8N2G6 241 aaKnown RBP8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 MRPL32Q9BYC8 188 aaKnown RBP8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 MRPL20Q9BYC9 149 aaKnown RBP8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 FAM74A7A6NL05 159 aa8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 NPIPB9F8W1W9 429 aa8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 NPIPB7O75200 414 aa8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 PAX1P15863 534 aa8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 IFITM2Q01629 132 aa8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 ZNF672Q499Z4 452 aaPredicted RBP8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 ZNF362Q5T0B9 420 aaPredicted RBP8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 LINC00305Q7Z4B0 112 aa8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 BMPERQ8N8U9 685 aa8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 CTHRC1Q96CG8 243 aa8.4□□□□□ -1.07
CLTCL1-202ENST00000427926 ARID2Q68CP9 1835 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms