RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 NPBWR1P48145 328 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 RAB11AP62491 216 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 SLC24A4Q8NFF2 622 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 KPTNQ9Y664 436 aa17.66■□□□□ 0.42
CNEP1R1-202ENST00000427478 IFNA4P05014 189 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 MDKP21741 143 aaPredicted RBP17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 PLA2G5P39877 138 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 OR4C13Q8NGP0 309 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 C8orf46Q8TAG6 207 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 ZNF257Q9Y2Q1 563 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 WASHC3Q9Y3C0 194 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 PRSS46E5RG02 174 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 EIF3GO75821 320 aaKnown RBP eCLIP17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 IGKV1D-33P01593 117 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 IGKV1-33P01594 117 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 NPY1RP25929 384 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 FGF8P55075 233 aaPredicted RBP17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 PRCDQ00LT1 54 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 ZNF787Q6DD87 383 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 ZNF709Q8N972 641 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 FAM122AQ96E09 287 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 CHODLQ9H9P2 273 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 PLEKHA3Q9HB20 300 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 ONECUT1Q9UBC0 465 aa17.65■□□□□ 0.42
CNEP1R1-202ENST00000427478 TRAV1-1A0A0B4J248 108 aa17.64■□□□□ 0.41
CNEP1R1-202ENST00000427478 C22orf46C9J442 243 aa17.64■□□□□ 0.41
CNEP1R1-202ENST00000427478 COX7A1P24310 79 aa17.64■□□□□ 0.41
CNEP1R1-202ENST00000427478 FFAR4Q5NUL3 377 aa17.64■□□□□ 0.41
CNEP1R1-202ENST00000427478 TNFRSF14Q92956 283 aa17.64■□□□□ 0.41
CNEP1R1-202ENST00000427478 PCGF1Q9BSM1 259 aa17.64■□□□□ 0.41
CNEP1R1-202ENST00000427478 CLEC7AQ9BXN2 247 aa17.64■□□□□ 0.41
CNEP1R1-202ENST00000427478 SLC35B3Q9H1N7 401 aa17.64■□□□□ 0.41
CNEP1R1-202ENST00000427478 TEX50A0A1B0GTY4 177 aa17.63■□□□□ 0.41
CNEP1R1-202ENST00000427478 TSPAN4O14817 238 aa17.63■□□□□ 0.41
CNEP1R1-202ENST00000427478 CA2P00918 260 aa17.63■□□□□ 0.41
CNEP1R1-202ENST00000427478 OR13C7P0DN81 318 aa17.63■□□□□ 0.41
CNEP1R1-202ENST00000427478 HLA-DRB5Q30154 266 aa17.63■□□□□ 0.41
CNEP1R1-202ENST00000427478 CLDND2Q8NHS1 167 aa17.63■□□□□ 0.41
CNEP1R1-202ENST00000427478 WDR83OSQ9Y284 106 aa17.63■□□□□ 0.41
CNEP1R1-202ENST00000427478 IGLV1-47P01700 117 aa17.63■□□□□ 0.41
CNEP1R1-202ENST00000427478 RAB13P51153 203 aa17.63■□□□□ 0.41
CNEP1R1-202ENST00000427478 PRRX1P54821 245 aa17.63■□□□□ 0.41
CNEP1R1-202ENST00000427478 RPP25LQ8N5L8 163 aaKnown RBP17.63■□□□□ 0.41
CNEP1R1-202ENST00000427478 MBD3L1Q8WWY6 194 aa17.63■□□□□ 0.41
CNEP1R1-202ENST00000427478 FKBP11Q9NYL4 201 aa17.63■□□□□ 0.41
CNEP1R1-202ENST00000427478 IGHV3-72A0A0B4J1Y9 119 aa17.62■□□□□ 0.41
CNEP1R1-202ENST00000427478 C17orf112F2Z3M2 114 aa17.62■□□□□ 0.41
CNEP1R1-202ENST00000427478 RBP4P02753 201 aa17.62■□□□□ 0.41
CNEP1R1-202ENST00000427478 LIPFP07098 398 aa17.62■□□□□ 0.41
CNEP1R1-202ENST00000427478 GGACTQ9BVM4 153 aa17.62■□□□□ 0.41
CNEP1R1-202ENST00000427478 GNG13Q9P2W3 67 aa17.62■□□□□ 0.41
CNEP1R1-202ENST00000427478 MAP1LC3B2A6NCE7 125 aa17.62■□□□□ 0.41
CNEP1R1-202ENST00000427478 NDUFS7O75251 213 aa17.62■□□□□ 0.41
CNEP1R1-202ENST00000427478 ICAM4Q14773 271 aa17.62■□□□□ 0.41
CNEP1R1-202ENST00000427478 TMEM88Q6PEY1 159 aa17.62■□□□□ 0.41
CNEP1R1-202ENST00000427478 LY6G5BQ8NDX9 201 aa17.62■□□□□ 0.41
CNEP1R1-202ENST00000427478 MAP1LC3BQ9GZQ8 125 aa17.62■□□□□ 0.41
CNEP1R1-202ENST00000427478 SMDT1Q9H4I9 107 aa17.62■□□□□ 0.41
CNEP1R1-202ENST00000427478 PATZ1Q9HBE1 687 aaKnown RBP17.62■□□□□ 0.41
CNEP1R1-202ENST00000427478 DLK1P80370 383 aa17.61■□□□□ 0.41
CNEP1R1-202ENST00000427478 TREML4Q6UXN2 200 aa17.61■□□□□ 0.41
CNEP1R1-202ENST00000427478 Q8N7P7 452 aa17.61■□□□□ 0.41
CNEP1R1-202ENST00000427478 CLRN3Q8NCR9 226 aa17.61■□□□□ 0.41
CNEP1R1-202ENST00000427478 OR5B3Q8NH48 314 aa17.61■□□□□ 0.41
CNEP1R1-202ENST00000427478 RXFP4Q8TDU9 374 aa17.61■□□□□ 0.41
CNEP1R1-202ENST00000427478 SLC25A22Q9H936 323 aa17.61■□□□□ 0.41
CNEP1R1-202ENST00000427478 TNCP24821 2201 aa17.61■□□□□ 0.41
CNEP1R1-202ENST00000427478 ENSAO43768 121 aaKnown RBP17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 IGLV2-23P01705 113 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 MC5RP33032 325 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 RPL8P62917 257 aaKnown RBP17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 ZNF506Q5JVG8 444 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 OR10G4Q8NGN3 311 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 OR10G9Q8NGN4 311 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 OR10G7Q8NGN6 311 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 COMMD5Q9GZQ3 224 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 hCG_1809904A0A1W2PP81 198 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 A0A1W2PPE2 198 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 A0A1W2PR64 198 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 A0A1W2PRV1 198 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 BUB1B-PAK6H3BSN5 160 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 MBP02144 154 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 USF1P22415 310 aaPredicted RBP17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 CBLN2Q8IUK8 224 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 BEND2Q8NDZ0 799 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 VSTM2AQ8TAG5 236 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 RITA1Q96K30 269 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 SSBP3Q9BWW4 388 aaPredicted RBP17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 SLC39A9Q9NUM3 307 aa17.6■□□□□ 0.41
CNEP1R1-202ENST00000427478 ZFP92A6NM28 416 aa17.59■□□□□ 0.41
CNEP1R1-202ENST00000427478 HMGB3O15347 200 aaKnown RBP17.59■□□□□ 0.41
CNEP1R1-202ENST00000427478 AKIRIN2Q53H80 203 aa17.59■□□□□ 0.41
CNEP1R1-202ENST00000427478 PNKDQ8N490 385 aa17.59■□□□□ 0.41
CNEP1R1-202ENST00000427478 OR10W1Q8NGF6 305 aa17.59■□□□□ 0.41
CNEP1R1-202ENST00000427478 TMEM167AQ8TBQ9 72 aa17.59■□□□□ 0.41
CNEP1R1-202ENST00000427478 LOC102723971A0A1B0GUV8 181 aa17.59■□□□□ 0.41
CNEP1R1-202ENST00000427478 FBP1P09467 338 aa17.59■□□□□ 0.41
CNEP1R1-202ENST00000427478 IGFBP2P18065 325 aa17.59■□□□□ 0.41
CNEP1R1-202ENST00000427478 GPR6P46095 362 aaPredicted RBP17.59■□□□□ 0.41
CNEP1R1-202ENST00000427478 FAM122CQ6P4D5 195 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms