RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 ICE1Q9Y2F5 2266 aa15.75■□□□□ 0.11
SNX17-202ENST00000427123 AP4M1O00189 453 aa15.75■□□□□ 0.11
SNX17-202ENST00000427123 UPK2O00526 184 aa15.75■□□□□ 0.11
SNX17-202ENST00000427123 PAGE4O60829 102 aa15.75■□□□□ 0.11
SNX17-202ENST00000427123 YIF1AO95070 293 aa15.75■□□□□ 0.11
SNX17-202ENST00000427123 DEFA4P12838 97 aa15.75■□□□□ 0.11
SNX17-202ENST00000427123 GCSAMLQ5JQS6 135 aa15.75■□□□□ 0.11
SNX17-202ENST00000427123 RPUSD4Q96CM3 377 aaKnown RBP15.75■□□□□ 0.11
SNX17-202ENST00000427123 NEIL1Q96FI4 390 aaPredicted RBP15.75■□□□□ 0.11
SNX17-202ENST00000427123 NPVFQ9HCQ7 196 aa15.75■□□□□ 0.11
SNX17-202ENST00000427123 LSM4Q9Y4Z0 139 aaKnown RBP15.75■□□□□ 0.11
SNX17-202ENST00000427123 YLPM1P49750 1951 aaKnown RBP15.74■□□□□ 0.11
SNX17-202ENST00000427123 A0A1W2PPV4 95 aa15.74■□□□□ 0.11
SNX17-202ENST00000427123 SHISA9B4DS77 424 aa15.74■□□□□ 0.11
SNX17-202ENST00000427123 MEOX2P50222 304 aa15.74■□□□□ 0.11
SNX17-202ENST00000427123 FABP9Q0Z7S8 132 aa15.74■□□□□ 0.11
SNX17-202ENST00000427123 RNASE6Q93091 150 aaKnown RBP15.74■□□□□ 0.11
SNX17-202ENST00000427123 VKORC1Q9BQB6 163 aa15.74■□□□□ 0.11
SNX17-202ENST00000427123 PARLQ9H300 379 aa15.74■□□□□ 0.11
SNX17-202ENST00000427123 DYNLRB1Q9NP97 96 aa15.74■□□□□ 0.11
SNX17-202ENST00000427123 CA2P00918 260 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 S100A8P05109 93 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 PRCDQ00LT1 54 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 ADIRFQ15847 76 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 NCMAPQ5T1S8 102 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 PLEKHA3Q9HB20 300 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 ZNRD1Q9P1U0 126 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 FNDC10F2Z333 226 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 TNFRSF13BO14836 293 aaPredicted RBP15.73■□□□□ 0.11
SNX17-202ENST00000427123 NDUFB3O43676 98 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 FCN3O75636 299 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 IGKV1-16P04430 117 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 CCL3L1P16619 93 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 LRRC10Q5BKY1 277 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 ARSJQ5FYB0 599 aaPredicted RBP15.73■□□□□ 0.11
SNX17-202ENST00000427123 TMEM200BQ69YZ2 307 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 DMRTC2Q8IXT2 367 aaPredicted RBP15.73■□□□□ 0.11
SNX17-202ENST00000427123 CCL17Q92583 94 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 BET1LQ9NYM9 111 aa15.73■□□□□ 0.11
SNX17-202ENST00000427123 RP1L1Q8IWN7 2480 aaPredicted RBP15.73■□□□□ 0.11
SNX17-202ENST00000427123 ACACAQ13085 2346 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 C11orf94C9JXX5 98 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 APOA2P02652 100 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 OPN1MWP04001 364 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 OPN1MW2P0DN77 364 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 OPN1MW3P0DN78 364 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 KIAA0141Q14154 515 aaPredicted RBP15.72■□□□□ 0.11
SNX17-202ENST00000427123 MIC13Q5XKP0 118 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 MRPL20Q9BYC9 149 aaKnown RBP15.72■□□□□ 0.11
SNX17-202ENST00000427123 FKBP11Q9NYL4 201 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 APC2O95996 2303 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 E7EQL1 145 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 J3QR06 171 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 FAM87AP0C7U9 286 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 MYOD1P15172 320 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 BSXQ3C1V8 233 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 TEPPQ6URK8 271 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 OSR1Q8TAX0 266 aaPredicted RBP15.72■□□□□ 0.11
SNX17-202ENST00000427123 H1FXQ92522 213 aaKnown RBP15.72■□□□□ 0.11
SNX17-202ENST00000427123 C1orf159Q96HA4 380 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 HINT2Q9BX68 163 aa15.72■□□□□ 0.11
SNX17-202ENST00000427123 PATZ1Q9HBE1 687 aaKnown RBP15.72■□□□□ 0.11
SNX17-202ENST00000427123 TGOLN2O43493 480 aa15.71■□□□□ 0.11
SNX17-202ENST00000427123 RPL23P62829 140 aaKnown RBP15.71■□□□□ 0.11
SNX17-202ENST00000427123 FAM71F2Q6NXP2 309 aa15.71■□□□□ 0.11
SNX17-202ENST00000427123 C8orf31Q8N9H6 132 aa15.71■□□□□ 0.11
SNX17-202ENST00000427123 FAM210BQ96KR6 192 aa15.71■□□□□ 0.11
SNX17-202ENST00000427123 SRRM4A7MD48 611 aaKnown RBP15.7■□□□□ 0.1
SNX17-202ENST00000427123 PDE6DO43924 150 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 SAA1P0DJI8 122 aaPredicted RBP15.7■□□□□ 0.1
SNX17-202ENST00000427123 ATP5IP56385 69 aaPredicted RBP15.7■□□□□ 0.1
SNX17-202ENST00000427123 RAB31Q13636 194 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 LYPD2Q6UXB3 125 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 TCEAL7Q9BRU2 100 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 TRBV24-1A0A075B6N3 115 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 H0YJW9 148 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 CXorf1O96002 111 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 STAG3L2P0CL84 134 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 STAG3L3P0CL85 134 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 SMIM6P0DI80 62 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 B2MP61769 119 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 EFNB3Q15768 340 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 OR5B3Q8NH48 314 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 NEUROG1Q92886 237 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 SSX3Q99909 188 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 KAAG1Q9UBP8 84 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 BSNQ9UPA5 3926 aa15.7■□□□□ 0.1
SNX17-202ENST00000427123 VENTXO95231 258 aa15.69■□□□□ 0.1
SNX17-202ENST00000427123 C16orf82Q7Z2V1 217 aa15.69■□□□□ 0.1
SNX17-202ENST00000427123 LINC00311Q8N616 119 aa15.69■□□□□ 0.1
SNX17-202ENST00000427123 OR5AN1Q8NGI8 311 aa15.69■□□□□ 0.1
SNX17-202ENST00000427123 ZNF596Q8TC21 504 aa15.69■□□□□ 0.1
SNX17-202ENST00000427123 SSMEM1Q8WWF3 244 aa15.69■□□□□ 0.1
SNX17-202ENST00000427123 CTSZQ9UBR2 303 aa15.69■□□□□ 0.1
SNX17-202ENST00000427123 TEX50A0A1B0GTY4 177 aa15.68■□□□□ 0.1
SNX17-202ENST00000427123 F6UZH7 168 aa15.68■□□□□ 0.1
SNX17-202ENST00000427123 DVL1O14640 695 aa15.68■□□□□ 0.1
SNX17-202ENST00000427123 ARL14EPLP0DKL9 152 aa15.68■□□□□ 0.1
SNX17-202ENST00000427123 APOBEC3AP31941 199 aaPredicted RBP15.68■□□□□ 0.1
SNX17-202ENST00000427123 RPL29P47914 159 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms