RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 CTAG1AP78358 180 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 DIAPH2-AS1Q14236 149 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 CST9LP1Q5W188 147 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 SPNS3Q6ZMD2 512 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 OR51G1Q8NGK1 321 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 TCEAL7Q9BRU2 100 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 SEBOXQ9HB31 216 aaPredicted RBP9.48□□□□□ -0.89
UBR4-207ENST00000425413 SLC35D1Q9NTN3 355 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 RALYQ9UKM9 306 aaKnown RBP9.48□□□□□ -0.89
UBR4-207ENST00000425413 PLXNB1O43157 2135 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 TRBV23-1A0A0A0MS06 115 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 hADV38S2A0JD32 116 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 CT45A6P0DMU7 189 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 CT45A5P0DMU8 189 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 CT45A7P0DMV0 189 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 CDC34P49427 236 aaPredicted RBP9.48□□□□□ -0.89
UBR4-207ENST00000425413 S100A12P80511 92 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 PDLIM3Q53GG5 364 aaPredicted RBP9.48□□□□□ -0.89
UBR4-207ENST00000425413 TREML4Q6UXN2 200 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 SLC35E3Q7Z769 313 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 OR13D1Q8NGV5 346 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 COL25A1Q9BXS0 654 aaPredicted RBP9.48□□□□□ -0.89
UBR4-207ENST00000425413 ELOVL5Q9NYP7 299 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 RPUSD1Q9UJJ7 312 aaKnown RBP9.48□□□□□ -0.89
UBR4-207ENST00000425413 TIMM9Q9Y5J7 89 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 ABCA1O95477 2261 aa9.48□□□□□ -0.89
UBR4-207ENST00000425413 PPIAL4EA0A075B759 164 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 A0A1W2PPV4 95 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 C17orf112F2Z3M2 114 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 PPIAL4DF5H284 164 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 K7ENP7 123 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 CA2P00918 260 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 PPIAL4FP0DN26 164 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 THBS3P49746 956 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 GFI1BQ5VTD9 330 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 ZNF439Q8NDP4 499 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 MRPL20Q9BYC9 149 aaKnown RBP9.47□□□□□ -0.89
UBR4-207ENST00000425413 ENY2Q9NPA8 101 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 WDR83OSQ9Y284 106 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 PPIAL4AQ9Y536 164 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 MALRD1Q5VYJ5 2156 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 ZNF729A6NN14 1252 aaPredicted RBP9.47□□□□□ -0.89
UBR4-207ENST00000425413 C15orf61A6NNL5 157 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 E7EQL1 145 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 RBFOX2O43251 390 aaKnown RBP eCLIP9.47□□□□□ -0.894e-7■■■■□ 24.7
UBR4-207ENST00000425413 S100A2P29034 98 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 TMEM200BQ69YZ2 307 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 Q8N7P7 452 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 FAM210BQ96KR6 192 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 PARD6GQ9BYG4 376 aaPredicted RBP9.47□□□□□ -0.89
UBR4-207ENST00000425413 OR51B2Q9Y5P1 312 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 DSCAML1Q8TD84 2053 aa9.47□□□□□ -0.89
UBR4-207ENST00000425413 A0A087WWC5 75 aa9.46□□□□□ -0.89
UBR4-207ENST00000425413 ACOT6Q3I5F7 207 aaPredicted RBP9.46□□□□□ -0.89
UBR4-207ENST00000425413 MGST2Q99735 147 aa9.46□□□□□ -0.89
UBR4-207ENST00000425413 RAXQ9Y2V3 346 aa9.46□□□□□ -0.89
UBR4-207ENST00000425413 TMEM178BH3BS89 294 aa9.46□□□□□ -0.9
UBR4-207ENST00000425413 MBP02144 154 aa9.46□□□□□ -0.9
UBR4-207ENST00000425413 NPY1RP25929 384 aa9.46□□□□□ -0.9
UBR4-207ENST00000425413 MLANAQ16655 118 aa9.46□□□□□ -0.9
UBR4-207ENST00000425413 WDR25Q64LD2 544 aaPredicted RBP9.46□□□□□ -0.9
UBR4-207ENST00000425413 CENPVQ7Z7K6 275 aaPredicted RBP9.46□□□□□ -0.9
UBR4-207ENST00000425413 C1QL4Q86Z23 238 aa9.46□□□□□ -0.9
UBR4-207ENST00000425413 OR10W1Q8NGF6 305 aa9.46□□□□□ -0.9
UBR4-207ENST00000425413 RNASE6Q93091 150 aaKnown RBP9.46□□□□□ -0.9
UBR4-207ENST00000425413 SDF2L1Q9HCN8 221 aa9.46□□□□□ -0.9
UBR4-207ENST00000425413 TMEM106BQ9NUM4 274 aa9.46□□□□□ -0.9
UBR4-207ENST00000425413 PXMP4Q9Y6I8 212 aa9.46□□□□□ -0.9
UBR4-207ENST00000425413 ASH1LQ9NR48 2969 aaKnown RBP9.46□□□□□ -0.9
UBR4-207ENST00000425413 IGHV3-72A0A0B4J1Y9 119 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 HIST1H2BKO60814 126 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 ACTL6BO94805 426 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 HIST1H2BJP06899 126 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 HOXA5P20719 270 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 HIST1H2BOP23527 126 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 CHRNB4P30926 498 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 HIST1H2BBP33778 126 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 ATP5G3P48201 142 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 HIST1H2BDP58876 126 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 HSPE1P61604 102 aaKnown RBP9.45□□□□□ -0.9
UBR4-207ENST00000425413 HIST1H2BCP62807 126 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 RPP30P78346 268 aaKnown RBP9.45□□□□□ -0.9
UBR4-207ENST00000425413 HIST2H2BEQ16778 126 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 VWC2Q2TAL6 325 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 ARSJQ5FYB0 599 aaPredicted RBP9.45□□□□□ -0.9
UBR4-207ENST00000425413 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.45□□□□□ -0.9
UBR4-207ENST00000425413 TEX36Q5VZQ5 186 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 SLC25A48Q6ZT89 311 aaKnown RBP9.45□□□□□ -0.9
UBR4-207ENST00000425413 SLC24A4Q8NFF2 622 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 HIST1H2BHQ93079 126 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 ZNF714Q96N38 554 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 HIST1H2BNQ99877 126 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 HIST1H2BMQ99879 126 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 GGACTQ9BVM4 153 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 PARLQ9H300 379 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 J3QR06 171 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 DVL1O14640 695 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 IGHV3-48P01763 117 aa9.45□□□□□ -0.9
UBR4-207ENST00000425413 GATA2P23769 480 aaPredicted RBP9.45□□□□□ -0.9
UBR4-207ENST00000425413 MAS1LP35410 378 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms