RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 TRAV1-1A0A0B4J248 108 aa12.25□□□□□ -0.45
CALD1-206ENST00000424922 RAB7AP51149 207 aa12.25□□□□□ -0.45
CALD1-206ENST00000424922 RPL30P62888 115 aaKnown RBP12.25□□□□□ -0.45
CALD1-206ENST00000424922 TMEM267Q0VDI3 215 aaPredicted RBP12.25□□□□□ -0.45
CALD1-206ENST00000424922 LY6G5BQ8NDX9 201 aa12.25□□□□□ -0.45
CALD1-206ENST00000424922 C10orf105Q8TEF2 133 aa12.25□□□□□ -0.45
CALD1-206ENST00000424922 SMCO4Q9NRQ5 59 aa12.25□□□□□ -0.45
CALD1-206ENST00000424922 A0A1W2PPH5 198 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 MARCH11A6NNE9 402 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 C17orf98A8MV24 154 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 ITGB1BP1O14713 200 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 RAB29O14966 203 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 LIPFP07098 398 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 IGHV1-8P0DP01 117 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 PAX1P15863 534 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 UBE2KP61086 200 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 TNFRSF9Q07011 255 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 SCGB1C1Q8TD33 95 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 RAB39BQ96DA2 213 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 ONECUT1Q9UBC0 465 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 GAB2Q9UQC2 676 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 RFNGQ9Y644 331 aa12.24□□□□□ -0.45
CALD1-206ENST00000424922 C5orf52A6NGY3 159 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 H3BP45 60 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 IAPPP10997 89 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 FOLR2P14207 255 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 ZFP36P26651 326 aaKnown RBP12.23□□□□□ -0.45
CALD1-206ENST00000424922 RAB2AP61019 212 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 LMO4P61968 165 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 RUNX1Q01196 453 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 RPL39P5Q59GN2 51 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 TMEM14EPQ6UXP3 125 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 RBMXL1Q96E39 390 aaKnown RBP12.23□□□□□ -0.45
CALD1-206ENST00000424922 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.23□□□□□ -0.45
CALD1-206ENST00000424922 ZNRD1Q9P1U0 126 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 NAV2Q8IVL1 2488 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 RBFOX3A6NFN3 312 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 NDUFS8O00217 210 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 RAMP3O60896 148 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 PROP1O75360 226 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 DLX1P56177 255 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 BRWD1-AS2P59051 145 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 LRRC75BQ2VPJ9 315 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 SLC25A48Q6ZT89 311 aaKnown RBP12.23□□□□□ -0.45
CALD1-206ENST00000424922 HAPLN4Q86UW8 402 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 THNSL2Q86YJ6 484 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 LYG1Q8N1E2 194 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 CD300LFQ8TDQ1 290 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 TCTEX1D2Q8WW35 142 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 FBXO7Q9Y3I1 522 aa12.23□□□□□ -0.45
CALD1-206ENST00000424922 METTL15P1P0C7V9 234 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 LINC00205P59089 165 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 LCN2P80188 198 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 SERF2P84101 59 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 ARL16Q0P5N6 197 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 MAJINQ3KP22 176 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 C9orf152Q5JTZ5 239 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 SLC25A24Q6NUK1 477 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 C1orf229Q6ZS94 237 aaPredicted RBP12.22□□□□□ -0.45
CALD1-206ENST00000424922 RBKSQ9H477 322 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 TUBA4BQ9H853 241 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 IGHV4-30-2A0A087WSY4 118 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 SAA2-SAA4A0A096LPE2 208 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 VWC2LB2RUY7 222 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 S1PR2O95136 353 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 SAA2P0DJI9 122 aaPredicted RBP12.22□□□□□ -0.45
CALD1-206ENST00000424922 ARF6P62330 175 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 CCL20P78556 96 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 PRB3Q04118 309 aaPredicted RBP12.22□□□□□ -0.45
CALD1-206ENST00000424922 ATP6V1FQ16864 119 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 ZNF506Q5JVG8 444 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 RBMS3Q6XE24 437 aaKnown RBP12.22□□□□□ -0.45
CALD1-206ENST00000424922 C15orf54Q8N8G6 183 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 TMEM133Q9H2Q1 129 aa12.22□□□□□ -0.45
CALD1-206ENST00000424922 METTL1Q9UBP6 276 aaKnown RBP12.22□□□□□ -0.45
CALD1-206ENST00000424922 LINC00473A8K010 186 aa12.21□□□□□ -0.45
CALD1-206ENST00000424922 M0R1X1 148 aa12.21□□□□□ -0.45
CALD1-206ENST00000424922 G6PCP35575 357 aa12.21□□□□□ -0.45
CALD1-206ENST00000424922 ZNF816Q0VGE8 651 aaPredicted RBP12.21□□□□□ -0.45
CALD1-206ENST00000424922 RHEBQ15382 184 aa12.21□□□□□ -0.45
CALD1-206ENST00000424922 ABHD12Q8N2K0 398 aa12.21□□□□□ -0.45
CALD1-206ENST00000424922 CIB3Q96Q77 187 aaPredicted RBP12.21□□□□□ -0.45
CALD1-206ENST00000424922 A0A087X0M5 115 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 IGHV4-61A0A0C4DH41 118 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 A0A1B0GX30 115 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 hCG_1809904A0A1W2PP81 198 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 A0A1W2PPE2 198 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 A0A1W2PR64 198 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 A0A1W2PRV1 198 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 FAM90A9PA6NNJ1 464 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 LY86O95711 162 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 KRASP01116 189 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 RBP4P02753 201 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 SPANXN5Q5MJ07 72 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 MBD3L1Q8WWY6 194 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 TIMM9Q9Y5J7 89 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 COLCA2A8K830 154 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 J3QR06 171 aa12.2□□□□□ -0.46
CALD1-206ENST00000424922 SCAF4O95104 1147 aaKnown RBP12.2□□□□□ -0.46
CALD1-206ENST00000424922 HSPB1P04792 205 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms