RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 AQP7O14520 342 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 SERF1AO75920 110 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 DEFA4P12838 97 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 NPY1RP25929 384 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 THBS3P49746 956 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 RPS16P62249 146 aaKnown RBP12.56□□□□□ -0.4
C9orf3-204ENST00000424143 SPINK9Q5DT21 86 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 RASL11AQ6T310 242 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 TCF23Q7RTU1 214 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 GCSAMQ8N6F7 178 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 STPG3Q8N7X2 389 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 RNF2Q99496 336 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 IFI27L2Q9H2X8 130 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 PARD6AQ9NPB6 346 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 ZNF257Q9Y2Q1 563 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 DNAJC13O75165 2243 aa12.56□□□□□ -0.4
C9orf3-204ENST00000424143 ISLRO14498 428 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 DLEU1O43261 78 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 LINC00869P0C866 280 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 CBLN1P23435 193 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 BRS3P32247 399 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 ARSJQ5FYB0 599 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-204ENST00000424143 TOMM20LQ6UXN7 152 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 PQLC2Q6ZP29 291 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 SLC24A4Q8NFF2 622 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 HSPB9Q9BQS6 159 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 VAMP8Q9BV40 100 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 FOXJ2Q9P0K8 574 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 GNG12Q9UBI6 72 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 HCFC1P51610 2035 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 PGPEP1LA6NFU8 196 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 FCN1O00602 326 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 TIMM8AO60220 97 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-204ENST00000424143 GPX1P07203 203 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 BAGE3Q86Y29 109 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 BAGE2Q86Y30 109 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 DEFB127Q9H1M4 99 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 PRO3102Q9H379 93 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 AURKAIP1Q9NWT8 199 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-204ENST00000424143 ZNF586Q9NXT0 402 aa12.55□□□□□ -0.4
C9orf3-204ENST00000424143 TECRQ9NZ01 308 aaKnown RBP12.55□□□□□ -0.4
C9orf3-204ENST00000424143 IGHV3-43A0A0B4J1X8 118 aa12.54□□□□□ -0.4
C9orf3-204ENST00000424143 A0A1W2PRE2 83 aa12.54□□□□□ -0.4
C9orf3-204ENST00000424143 HELTA6NFD8 242 aa12.54□□□□□ -0.4
C9orf3-204ENST00000424143 IGHV3-43DP0DP04 118 aa12.54□□□□□ -0.4
C9orf3-204ENST00000424143 COMPP49747 757 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-204ENST00000424143 HLA-DRB5Q30154 266 aa12.54□□□□□ -0.4
C9orf3-204ENST00000424143 KRTCAP3Q53RY4 240 aa12.54□□□□□ -0.4
C9orf3-204ENST00000424143 ABHD12Q8N2K0 398 aa12.54□□□□□ -0.4
C9orf3-204ENST00000424143 SIGLECL1Q8N7X8 197 aa12.54□□□□□ -0.4
C9orf3-204ENST00000424143 TMEM105Q8N8V8 129 aa12.54□□□□□ -0.4
C9orf3-204ENST00000424143 RFESDQ8TAC1 157 aa12.54□□□□□ -0.4
C9orf3-204ENST00000424143 LRRC29Q8WV35 223 aa12.54□□□□□ -0.4
C9orf3-204ENST00000424143 LINC00574Q9H8X3 128 aa12.54□□□□□ -0.4
C9orf3-204ENST00000424143 ENY2Q9NPA8 101 aa12.54□□□□□ -0.4
C9orf3-204ENST00000424143 PRNDQ9UKY0 176 aa12.54□□□□□ -0.4
C9orf3-204ENST00000424143 A0A1B0GUS0 222 aa12.53□□□□□ -0.4
C9orf3-204ENST00000424143 HLA-DQA1P01909 254 aa12.53□□□□□ -0.4
C9orf3-204ENST00000424143 HOXC12P31275 282 aa12.53□□□□□ -0.4
C9orf3-204ENST00000424143 GNG4P50150 75 aa12.53□□□□□ -0.4
C9orf3-204ENST00000424143 LINC00205P59089 165 aa12.53□□□□□ -0.4
C9orf3-204ENST00000424143 ZNF705AQ6ZN79 300 aaPredicted RBP12.53□□□□□ -0.4
C9orf3-204ENST00000424143 LRP11Q86VZ4 500 aa12.53□□□□□ -0.4
C9orf3-204ENST00000424143 WIPF2Q8TF74 440 aaPredicted RBP12.53□□□□□ -0.4
C9orf3-204ENST00000424143 ATG101Q9BSB4 218 aa12.53□□□□□ -0.4
C9orf3-204ENST00000424143 LRFN3Q9BTN0 628 aa12.53□□□□□ -0.4
C9orf3-204ENST00000424143 COMMD5Q9GZQ3 224 aa12.53□□□□□ -0.4
C9orf3-204ENST00000424143 SEPSECSQ9HD40 501 aaKnown RBP12.53□□□□□ -0.4
C9orf3-204ENST00000424143 LAMA1P25391 3075 aa12.53□□□□□ -0.4
C9orf3-204ENST00000424143 IGKV1D-17A0A075B6S4 117 aa12.52□□□□□ -0.4
C9orf3-204ENST00000424143 SMIM27A0A1W2PRY6 76 aa12.52□□□□□ -0.4
C9orf3-204ENST00000424143 GRIFINA4D1Z8 144 aa12.52□□□□□ -0.4
C9orf3-204ENST00000424143 DEFB108AA8MXU0 73 aa12.52□□□□□ -0.4
C9orf3-204ENST00000424143 ZNF25P17030 456 aaPredicted RBP12.52□□□□□ -0.4
C9orf3-204ENST00000424143 TAS2R45P59539 299 aa12.52□□□□□ -0.4
C9orf3-204ENST00000424143 RELQ04864 619 aaPredicted RBP12.52□□□□□ -0.4
C9orf3-204ENST00000424143 TIGITQ495A1 244 aa12.52□□□□□ -0.4
C9orf3-204ENST00000424143 RNFT1Q5M7Z0 435 aa12.52□□□□□ -0.4
C9orf3-204ENST00000424143 TMEM136Q6ZRR5 245 aa12.52□□□□□ -0.4
C9orf3-204ENST00000424143 WFIKKN1Q96NZ8 548 aa12.52□□□□□ -0.4
C9orf3-204ENST00000424143 TMEM208Q9BTX3 173 aa12.52□□□□□ -0.4
C9orf3-204ENST00000424143 MRPL27Q9P0M9 148 aaKnown RBP12.52□□□□□ -0.4
C9orf3-204ENST00000424143 R4GN57 208 aa12.52□□□□□ -0.4
C9orf3-204ENST00000424143 DIDO1Q9BTC0 2240 aaKnown RBP12.52□□□□□ -0.4
C9orf3-204ENST00000424143 CACNA1DQ01668 2161 aa12.52□□□□□ -0.41
C9orf3-204ENST00000424143 DOCK7Q96N67 2140 aa12.52□□□□□ -0.41
C9orf3-204ENST00000424143 A0A1W2PNU3 283 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-204ENST00000424143 SNURFLB1AK76 121 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 INS-IGF2F8WCM5 200 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 LYZL6O75951 148 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 CTRLP40313 264 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 IER3P46695 156 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 C3orf36Q3SXR2 165 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 C19orf35Q6ZS72 473 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 Q8N976 141 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 OR4P4Q8NGL7 312 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 MRPL32Q9BYC8 188 aaKnown RBP12.51□□□□□ -0.41
C9orf3-204ENST00000424143 SAMD10Q9BYL1 202 aa12.51□□□□□ -0.41
C9orf3-204ENST00000424143 CALYQ9NYX4 217 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms