RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 TMEM147Q9BVK8 224 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 DVL1O14640 695 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 RAB29O14966 203 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 P0C879 139 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 CT45A6P0DMU7 189 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 CT45A5P0DMU8 189 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 CT45A7P0DMV0 189 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 CNTFRP26992 372 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 FAM3BP58499 235 aaPredicted RBP9.76□□□□□ -0.85
PTPRN-204ENST00000423636 SSBP2P81877 361 aaPredicted RBP9.76□□□□□ -0.85
PTPRN-204ENST00000423636 SPNS3Q6ZMD2 512 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 OR13D1Q8NGV5 346 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 LRRK2Q5S007 2527 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 A0A1W2PPV4 95 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 H3BTX0 84 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 HPRT1P00492 218 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 GNB1P62873 340 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 ZNF506Q5JVG8 444 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 HCP5Q6MZN7 132 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 LFNGQ8NES3 379 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 OR10X1Q8NGY0 326 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 HIPK2Q9H2X6 1198 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 SLC35D1Q9NTN3 355 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 IL19Q9UHD0 177 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 S4R3C0 116 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 EPG5Q9HCE0 2579 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 NPPCP23582 126 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 ELOBQ15370 118 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 KRTCAP3Q53RY4 240 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 TREML4Q6UXN2 200 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 OR2T6Q8NHC8 308 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 BIN3Q9NQY0 253 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 GAB2Q9UQC2 676 aa9.76□□□□□ -0.85
PTPRN-204ENST00000423636 GFRA3O60609 400 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 NDUFB4O95168 129 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 MT-ND4LP03901 98 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 ACAA1P09110 424 aaPredicted RBP9.75□□□□□ -0.85
PTPRN-204ENST00000423636 ARL14EPLP0DKL9 152 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 HTD2P86397 168 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 ARSJQ5FYB0 599 aaPredicted RBP9.75□□□□□ -0.85
PTPRN-204ENST00000423636 RUSC1-AS1Q66K80 236 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 C1orf87Q8N0U7 546 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 ZNF114Q8NC26 417 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 MGST2Q99735 147 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 GSX1Q9H4S2 264 aaPredicted RBP9.75□□□□□ -0.85
PTPRN-204ENST00000423636 JPT1Q9UK76 154 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 OR51B2Q9Y5P1 312 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 ABCA12Q86UK0 2595 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 A0A1W2PPQ1 181 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 YPEL1O60688 119 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 CDC34P49427 236 aaPredicted RBP9.75□□□□□ -0.85
PTPRN-204ENST00000423636 ZNF66Q6ZN08 573 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 ZNF788Q6ZQV5 615 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 C15orf54Q8N8G6 183 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 YPEL2Q96QA6 119 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 PARLQ9H300 379 aa9.75□□□□□ -0.85
PTPRN-204ENST00000423636 PPIAL4EA0A075B759 164 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 ZNF98A6NK75 572 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 PPIAL4DF5H284 164 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 J3QR06 171 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 PPIAL4FP0DN26 164 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 OR9G1Q8NH87 305 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 HARBI1Q96MB7 349 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 UHRF2Q96PU4 802 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 IDI2-AS1Q9NZ38 188 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 CISD1Q9NZ45 108 aaKnown RBP9.74□□□□□ -0.85
PTPRN-204ENST00000423636 PPIAL4AQ9Y536 164 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 DOPEY2Q9Y3R5 2298 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 HBE1P02100 147 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 SAA1P0DJI8 122 aaPredicted RBP9.74□□□□□ -0.85
PTPRN-204ENST00000423636 MEF2BQ02080 365 aaPredicted RBP9.74□□□□□ -0.85
PTPRN-204ENST00000423636 ZNF561Q8N587 486 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 ENY2Q9NPA8 101 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 PXMP4Q9Y6I8 212 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 IGSF10Q6WRI0 2623 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 C11orf94C9JXX5 98 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 SLC25A17O43808 307 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 NDUFS7O75251 213 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 TOX4O94842 621 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 COMMD1Q8N668 190 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 NHLRC2Q8NBF2 726 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 SIRT7Q9NRC8 400 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 RYDENQ9NUL5 291 aaKnown RBP9.74□□□□□ -0.85
PTPRN-204ENST00000423636 TMEM106BQ9NUM4 274 aa9.74□□□□□ -0.85
PTPRN-204ENST00000423636 TRBV23-1A0A0A0MS06 115 aa9.73□□□□□ -0.85
PTPRN-204ENST00000423636 KHDC3LQ587J8 217 aa9.73□□□□□ -0.85
PTPRN-204ENST00000423636 C16orf82Q7Z2V1 217 aa9.73□□□□□ -0.85
PTPRN-204ENST00000423636 OR4P4Q8NGL7 312 aa9.73□□□□□ -0.85
PTPRN-204ENST00000423636 RNASE6Q93091 150 aaKnown RBP9.73□□□□□ -0.85
PTPRN-204ENST00000423636 C1orf159Q96HA4 380 aa9.73□□□□□ -0.85
PTPRN-204ENST00000423636 TRAV5A0A0B4J249 113 aa9.73□□□□□ -0.85
PTPRN-204ENST00000423636 A0A1B0GUS0 222 aa9.73□□□□□ -0.85
PTPRN-204ENST00000423636 SIAH2O43255 324 aa9.73□□□□□ -0.85
PTPRN-204ENST00000423636 C1QTNF9P0C862 333 aa9.73□□□□□ -0.85
PTPRN-204ENST00000423636 PSMB3P49720 205 aa9.73□□□□□ -0.85
PTPRN-204ENST00000423636 SLC35B1P78383 322 aa9.73□□□□□ -0.85
PTPRN-204ENST00000423636 MZT1Q08AG7 82 aa9.73□□□□□ -0.85
PTPRN-204ENST00000423636 ZBTB34Q8NCN2 500 aa9.73□□□□□ -0.85
PTPRN-204ENST00000423636 OR4S2Q8NH73 311 aa9.73□□□□□ -0.85
PTPRN-204ENST00000423636 VAX2Q9UIW0 290 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms