RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 PIEZO2Q9H5I5 2752 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 IGLV4-3A0A075B6K6 122 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 A0A0B4J2A0 478 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 A0A1B0GW64 132 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 ZNF727A8MUV8 499 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 GEMIN2O14893 280 aaKnown RBP3.95□□□□□ -1.78
VPS13A-207ENST00000419472 LMX1BO60663 402 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 TNFSF15O95150 251 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 KLF8O95600 359 aaPredicted RBP3.95□□□□□ -1.78
VPS13A-207ENST00000419472 OR5H8P0DN80 308 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 OR13C7P0DN81 318 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 IGLL1P15814 213 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 USF1P22415 310 aaPredicted RBP3.95□□□□□ -1.78
VPS13A-207ENST00000419472 ZBTB25P24278 435 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 S100A3P33764 101 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 FAUP35544 74 aaKnown RBP3.95□□□□□ -1.78
VPS13A-207ENST00000419472 TIMP3P35625 211 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 RIPPLY3P57055 190 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 PFN3P60673 137 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 RGNQ15493 299 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 GCSAMLQ5JQS6 135 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 CPTPQ5TA50 214 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 AGTRAPQ6RW13 159 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 TEX43Q6ZNM6 134 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 Q6ZS52 159 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 PRSS41Q7RTY9 318 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 TMEM144Q7Z5S9 345 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 OR4K17Q8NGC6 315 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 ACY3Q96HD9 319 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 RDH14Q9HBH5 336 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 SHPKQ9UHJ6 478 aa3.95□□□□□ -1.78
VPS13A-207ENST00000419472 TBL2Q9Y4P3 447 aaKnown RBP3.95□□□□□ -1.78
VPS13A-207ENST00000419472 IGLV3-16A0A075B6K0 115 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 TRAV1-2A0A0B4J238 106 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 IL3P08700 152 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 CT45A6P0DMU7 189 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 CT45A5P0DMU8 189 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 CT45A7P0DMV0 189 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 IGFBP3P17936 291 aaPredicted RBP3.94□□□□□ -1.78
VPS13A-207ENST00000419472 DRD3P35462 400 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 FABP6P51161 128 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 P2RX1P51575 399 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 PRDX4Q13162 271 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 RAB31Q13636 194 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 ZNF266Q14584 549 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 CT45A1Q5HYN5 189 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 TIMM23BQ5SRD1 257 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 STPG1Q5TH74 334 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 FAM71E1Q6IPT2 247 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 ZNF322Q6U7Q0 402 aaPredicted RBP3.94□□□□□ -1.78
VPS13A-207ENST00000419472 OR5AK2Q8NH90 309 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 OR2AE1Q8NHA4 323 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 CT45A3Q8NHU0 189 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 C15orf40Q8WUR7 153 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 CIB3Q96Q77 187 aaPredicted RBP3.94□□□□□ -1.78
VPS13A-207ENST00000419472 CHST6Q9GZX3 395 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 SMDT1Q9H4I9 107 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 TVP23BQ9NYZ1 205 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 DHRS4-AS1Q9P1J3 65 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 VPS29Q9UBQ0 182 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 MYO9AB2RTY4 2548 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 LAMA5O15230 3695 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 NINQ8N4C6 2090 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 K7EPK0 472 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 YPEL1O60688 119 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 CPSF4O95639 269 aaKnown RBP3.94□□□□□ -1.78
VPS13A-207ENST00000419472 SLC35E2P0CK97 266 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 IMPA1P29218 277 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 TBPL1P62380 186 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 REG3AQ06141 175 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 GUSBP1Q15486 140 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 MMDQ15546 238 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 CST6Q15828 149 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 SPSB3Q6PJ21 355 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 C1QL2Q7Z5L3 287 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 FAM71E2Q8N5Q1 922 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 OR4X1Q8NH49 305 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 ANKRD9Q96BM1 317 aaPredicted RBP3.94□□□□□ -1.78
VPS13A-207ENST00000419472 YPEL2Q96QA6 119 aa3.94□□□□□ -1.78
VPS13A-207ENST00000419472 LYRM2Q9NU23 88 aaPredicted RBP3.94□□□□□ -1.78
VPS13A-207ENST00000419472 MRPL27Q9P0M9 148 aaKnown RBP3.94□□□□□ -1.78
VPS13A-207ENST00000419472 FBN3Q75N90 2809 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 TRAV9-2A0A087WT02 112 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 GJE1A6NN92 205 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 J3QLI3 93 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 ZFAND5O76080 213 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 SOX14O95416 240 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 CD37P11049 281 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 KIR2DS2P43631 304 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 VDAC2P45880 294 aaPredicted RBP3.93□□□□□ -1.78
VPS13A-207ENST00000419472 GALR1P47211 349 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 NSDHLQ15738 373 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 TDRG1Q3Y452 100 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 OR10J3Q5JRS4 329 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 PRSS54Q6PEW0 395 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 DNM1P34Q6PK57 102 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 Q6ZT83 130 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 CLECL1Q8IZS7 167 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 PBDC1Q9BVG4 233 aa3.93□□□□□ -1.78
VPS13A-207ENST00000419472 TMEM242Q9NWH2 141 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms