RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 CRYGCP07315 174 aa10.67□□□□□ -0.7
LINC01006-202ENST00000418309 HIST1H1BP16401 226 aaKnown RBP10.67□□□□□ -0.7
LINC01006-202ENST00000418309 HLA-GP17693 338 aa10.67□□□□□ -0.7
LINC01006-202ENST00000418309 CATR1Q13166 79 aa10.67□□□□□ -0.7
LINC01006-202ENST00000418309 OR4A47Q6IF82 309 aa10.67□□□□□ -0.7
LINC01006-202ENST00000418309 GPHB5Q86YW7 130 aa10.67□□□□□ -0.7
LINC01006-202ENST00000418309 ZBTB34Q8NCN2 500 aa10.67□□□□□ -0.7
LINC01006-202ENST00000418309 OR4A5Q8NH83 315 aa10.67□□□□□ -0.7
LINC01006-202ENST00000418309 WDR89Q96FK6 387 aaPredicted RBP10.67□□□□□ -0.7
LINC01006-202ENST00000418309 TECRQ9NZ01 308 aaKnown RBP10.67□□□□□ -0.7
LINC01006-202ENST00000418309 DMRT1Q9Y5R6 373 aa10.67□□□□□ -0.7
LINC01006-202ENST00000418309 DNAH7Q8WXX0 4024 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 A0A0A6YYH2 397 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 MEIS3P1A6NDR6 274 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 A6NJ64 397 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 CTRB1P17538 263 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 CBLN1P23435 193 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 MSMO1Q15800 293 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 NEDD8Q15843 81 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 TIMM50Q3ZCQ8 353 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 CTRB2Q6GPI1 263 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 CACNG8Q8WXS5 425 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 CCDC140Q96MF4 163 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 FAM110AQ9BQ89 295 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 WFDC10AQ9H1F0 79 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 HIPK2Q9H2X6 1198 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 AUNIPQ9H7T9 357 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 SRD5A3Q9H8P0 318 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 ZC4H2Q9NQZ6 224 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 BET1LQ9NYM9 111 aa10.66□□□□□ -0.7
LINC01006-202ENST00000418309 TRBV7-1A0A0A6YYK4 115 aa10.65□□□□□ -0.7
LINC01006-202ENST00000418309 RBMY1BA6NDE4 496 aaKnown RBP10.65□□□□□ -0.7
LINC01006-202ENST00000418309 RBMY1EA6NEQ0 496 aaKnown RBP10.65□□□□□ -0.7
LINC01006-202ENST00000418309 HPRT1P00492 218 aa10.65□□□□□ -0.7
LINC01006-202ENST00000418309 CLEC3BP05452 202 aa10.65□□□□□ -0.7
LINC01006-202ENST00000418309 RBMY1DP0C7P1 496 aaKnown RBP10.65□□□□□ -0.7
LINC01006-202ENST00000418309 NQO2P16083 231 aa10.65□□□□□ -0.7
LINC01006-202ENST00000418309 CBX5P45973 191 aa10.65□□□□□ -0.7
LINC01006-202ENST00000418309 TAS2R31P59538 309 aa10.65□□□□□ -0.7
LINC01006-202ENST00000418309 ZNF57Q68EA5 555 aaPredicted RBP10.65□□□□□ -0.7
LINC01006-202ENST00000418309 LINC00322Q6ZN03 302 aaPredicted RBP10.65□□□□□ -0.7
LINC01006-202ENST00000418309 SLC16A13Q7RTY0 426 aa10.65□□□□□ -0.7
LINC01006-202ENST00000418309 TMEM17Q86X19 198 aa10.65□□□□□ -0.7
LINC01006-202ENST00000418309 DMBX1Q8NFW5 382 aa10.65□□□□□ -0.7
LINC01006-202ENST00000418309 OR5AP2Q8NGF4 316 aa10.65□□□□□ -0.7
LINC01006-202ENST00000418309 OR51H1Q8NH63 302 aa10.65□□□□□ -0.7
LINC01006-202ENST00000418309 CXorf58Q96LI9 332 aa10.65□□□□□ -0.7
LINC01006-202ENST00000418309 COMMD5Q9GZQ3 224 aa10.65□□□□□ -0.7
LINC01006-202ENST00000418309 IFT46Q9NQC8 304 aa10.65□□□□□ -0.7
LINC01006-202ENST00000418309 TRAV3A0A0B4J244 114 aa10.64□□□□□ -0.71
LINC01006-202ENST00000418309 MFSD2BA6NFX1 497 aa10.64□□□□□ -0.71
LINC01006-202ENST00000418309 CGB1A6NKQ9 187 aa10.64□□□□□ -0.71
LINC01006-202ENST00000418309 UPK2O00526 184 aa10.64□□□□□ -0.71
LINC01006-202ENST00000418309 RBFOX2O43251 390 aaKnown RBP eCLIP10.64□□□□□ -0.718e-7■■■■□ 24.2
LINC01006-202ENST00000418309 RPA2P15927 270 aa10.64□□□□□ -0.71
LINC01006-202ENST00000418309 OR2B8PP59922 312 aa10.64□□□□□ -0.71
LINC01006-202ENST00000418309 HERV-K104P61576 105 aa10.64□□□□□ -0.71
LINC01006-202ENST00000418309 AADACL3Q5VUY0 350 aa10.64□□□□□ -0.71
LINC01006-202ENST00000418309 ZNF818PQ6ZRF7 136 aa10.64□□□□□ -0.71
LINC01006-202ENST00000418309 UXS1Q8NBZ7 420 aa10.64□□□□□ -0.71
LINC01006-202ENST00000418309 GIMAP1Q8WWP7 306 aa10.64□□□□□ -0.71
LINC01006-202ENST00000418309 S100A16Q96FQ6 103 aaKnown RBP10.64□□□□□ -0.71
LINC01006-202ENST00000418309 IGLV11-55A0A075B6I3 123 aa10.63□□□□□ -0.71
LINC01006-202ENST00000418309 SCAF4O95104 1147 aaKnown RBP10.63□□□□□ -0.71
LINC01006-202ENST00000418309 OR52B4Q8NGK2 314 aa10.63□□□□□ -0.71
LINC01006-202ENST00000418309 IL17DQ8TAD2 202 aa10.63□□□□□ -0.71
LINC01006-202ENST00000418309 CD300LFQ8TDQ1 290 aa10.63□□□□□ -0.71
LINC01006-202ENST00000418309 TMEM140Q9NV12 185 aa10.63□□□□□ -0.71
LINC01006-202ENST00000418309 EHFQ9NZC4 300 aa10.63□□□□□ -0.71
LINC01006-202ENST00000418309 THYN1Q9P016 225 aa10.63□□□□□ -0.71
LINC01006-202ENST00000418309 MLXQ9UH92 298 aa10.63□□□□□ -0.71
LINC01006-202ENST00000418309 IGHV3-35A0A0C4DH35 117 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 TMEM213A2RRL7 107 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 CYB5BO43169 146 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 XRCC3O43542 346 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 S1PR2O95136 353 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 GPR183P32249 361 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 ERVK-16P61578 105 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 KLK9Q2XQG4 91 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 ANKRD55Q3KP44 614 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 TM4SF20Q53R12 229 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 PLET1Q6UQ28 207 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 TMEM61Q8N0U2 210 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 BORCS5Q969J3 196 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 QTRT1Q9BXR0 403 aaKnown RBP10.62□□□□□ -0.71
LINC01006-202ENST00000418309 PLEKHA2Q9HB19 425 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 KLK9Q9UKQ9 250 aa10.62□□□□□ -0.71
LINC01006-202ENST00000418309 IGLC7A0M8Q6 106 aa10.61□□□□□ -0.71
LINC01006-202ENST00000418309 A8MWP6 167 aa10.61□□□□□ -0.71
LINC01006-202ENST00000418309 TMEM127O75204 238 aa10.61□□□□□ -0.71
LINC01006-202ENST00000418309 PMP2P02689 132 aa10.61□□□□□ -0.71
LINC01006-202ENST00000418309 TRAPPC2P0DI81 140 aa10.61□□□□□ -0.71
LINC01006-202ENST00000418309 TRAPPC2BP0DI82 140 aa10.61□□□□□ -0.71
LINC01006-202ENST00000418309 GNRHRP30968 328 aa10.61□□□□□ -0.71
LINC01006-202ENST00000418309 TGFBR1P36897 503 aa10.61□□□□□ -0.71
LINC01006-202ENST00000418309 RFX2P48378 723 aa10.61□□□□□ -0.71
LINC01006-202ENST00000418309 POU2AF1Q16633 256 aa10.61□□□□□ -0.71
LINC01006-202ENST00000418309 ZNF585BQ52M93 769 aa10.61□□□□□ -0.71
LINC01006-202ENST00000418309 SLC25A24Q6NUK1 477 aa10.61□□□□□ -0.71
LINC01006-202ENST00000418309 BTNL8Q6UX41 500 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms