RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.94□□□□□ -0.5
ITGB1-204ENST00000417122 TRAV3A0A0B4J244 114 aa11.94□□□□□ -0.5
ITGB1-204ENST00000417122 CGB1A6NKQ9 187 aa11.94□□□□□ -0.5
ITGB1-204ENST00000417122 DHFRP00374 187 aa11.94□□□□□ -0.5
ITGB1-204ENST00000417122 IGLV1-51P01701 117 aa11.94□□□□□ -0.5
ITGB1-204ENST00000417122 AREGP15514 252 aa11.94□□□□□ -0.5
ITGB1-204ENST00000417122 C15orf32Q32M92 178 aa11.94□□□□□ -0.5
ITGB1-204ENST00000417122 DGCR14Q96DF8 476 aaKnown RBP11.94□□□□□ -0.5
ITGB1-204ENST00000417122 FBXL7Q9UJT9 491 aa11.94□□□□□ -0.5
ITGB1-204ENST00000417122 SORL1Q92673 2214 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 BMPR1BO00238 502 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 REG1AP05451 166 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 NHLRC4P0CG21 123 aaPredicted RBP11.93□□□□□ -0.5
ITGB1-204ENST00000417122 RPA2P15927 270 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 CTRB1P17538 263 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 LPAR6P43657 344 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 OR2B8PP59922 312 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 ERVK-16P61578 105 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 PHLDA2Q53GA4 152 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 RNASE12Q5GAN4 147 aaKnown RBP11.93□□□□□ -0.5
ITGB1-204ENST00000417122 FAM209BQ5JX69 171 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 CTRB2Q6GPI1 263 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 LPCAT3Q6P1A2 487 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 IL34Q6ZMJ4 242 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 FCAMRQ8WWV6 532 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 COMMD5Q9GZQ3 224 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 EXTL2Q9UBQ6 330 aa11.93□□□□□ -0.5
ITGB1-204ENST00000417122 MARCH11A6NNE9 402 aa11.92□□□□□ -0.5
ITGB1-204ENST00000417122 FGF2P09038 288 aa11.92□□□□□ -0.5
ITGB1-204ENST00000417122 DEFA4P12838 97 aa11.92□□□□□ -0.5
ITGB1-204ENST00000417122 HIST1H1BP16401 226 aaKnown RBP11.92□□□□□ -0.5
ITGB1-204ENST00000417122 S100GP29377 79 aa11.92□□□□□ -0.5
ITGB1-204ENST00000417122 PEMTQ9UBM1 199 aa11.92□□□□□ -0.5
ITGB1-204ENST00000417122 PPP5D1E7EU14 171 aa11.91□□□□□ -0.5
ITGB1-204ENST00000417122 M0QYG6 137 aa11.91□□□□□ -0.5
ITGB1-204ENST00000417122 NDUFB8O95169 186 aa11.91□□□□□ -0.5
ITGB1-204ENST00000417122 KRASP01116 189 aa11.91□□□□□ -0.5
ITGB1-204ENST00000417122 CSN3P07498 182 aa11.91□□□□□ -0.5
ITGB1-204ENST00000417122 UCP3P55916 312 aa11.91□□□□□ -0.5
ITGB1-204ENST00000417122 SPCS2Q15005 226 aa11.91□□□□□ -0.5
ITGB1-204ENST00000417122 KLK9Q2XQG4 91 aa11.91□□□□□ -0.5
ITGB1-204ENST00000417122 ZNF585BQ52M93 769 aa11.91□□□□□ -0.5
ITGB1-204ENST00000417122 CLVS1Q8IUQ0 354 aaPredicted RBP11.91□□□□□ -0.5
ITGB1-204ENST00000417122 ASCL2Q99929 193 aa11.91□□□□□ -0.5
ITGB1-204ENST00000417122 SRSF8Q9BRL6 282 aaKnown RBP11.91□□□□□ -0.5
ITGB1-204ENST00000417122 QTRT1Q9BXR0 403 aaKnown RBP11.91□□□□□ -0.5
ITGB1-204ENST00000417122 SIGLEC8Q9NYZ4 499 aa11.91□□□□□ -0.5
ITGB1-204ENST00000417122 KLK11Q9UBX7 282 aa11.91□□□□□ -0.5
ITGB1-204ENST00000417122 KLK9Q9UKQ9 250 aa11.91□□□□□ -0.5
ITGB1-204ENST00000417122 DMRT1Q9Y5R6 373 aa11.91□□□□□ -0.5
ITGB1-204ENST00000417122 IGLV11-55A0A075B6I3 123 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 IGLC7A0M8Q6 106 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 H0Y980 276 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 RGS5O15539 181 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 TPPPO94811 219 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 IGHV3-23P01764 117 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 G6PCP35575 357 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 THOC7Q6I9Y2 204 aaKnown RBP11.9□□□□□ -0.5
ITGB1-204ENST00000417122 TBC1D26Q86UD7 250 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 SLC38A6Q8IZM9 456 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 CADM3Q8N126 398 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 OR52I2Q8NH67 350 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 C15orf40Q8WUR7 153 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 EEF1AKMT3Q96AZ1 226 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 ABHD1Q96SE0 405 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 MIXL1Q9H2W2 232 aa11.9□□□□□ -0.5
ITGB1-204ENST00000417122 TEX50A0A1B0GTY4 177 aa11.89□□□□□ -0.51
ITGB1-204ENST00000417122 GGCTO75223 188 aaKnown RBP11.89□□□□□ -0.51
ITGB1-204ENST00000417122 CD3DP04234 171 aa11.89□□□□□ -0.51
ITGB1-204ENST00000417122 IFNA6P05013 189 aa11.89□□□□□ -0.51
ITGB1-204ENST00000417122 TRAPPC2P0DI81 140 aa11.89□□□□□ -0.51
ITGB1-204ENST00000417122 TRAPPC2BP0DI82 140 aa11.89□□□□□ -0.51
ITGB1-204ENST00000417122 RNASE10Q5GAN6 216 aaKnown RBP11.89□□□□□ -0.51
ITGB1-204ENST00000417122 CLEC19AQ6UXS0 136 aa11.89□□□□□ -0.51
ITGB1-204ENST00000417122 OR10W1Q8NGF6 305 aa11.89□□□□□ -0.51
ITGB1-204ENST00000417122 RAB2BQ8WUD1 216 aa11.89□□□□□ -0.51
ITGB1-204ENST00000417122 CCDC140Q96MF4 163 aa11.89□□□□□ -0.51
ITGB1-204ENST00000417122 FAM212BQ9NTI7 297 aaPredicted RBP11.89□□□□□ -0.51
ITGB1-204ENST00000417122 MTFP1Q9UDX5 166 aa11.89□□□□□ -0.51
ITGB1-204ENST00000417122 NSG2Q9Y328 171 aa11.89□□□□□ -0.51
ITGB1-204ENST00000417122 S4R3C0 116 aa11.89□□□□□ -0.51
ITGB1-204ENST00000417122 CTDSP2O14595 271 aa11.88□□□□□ -0.51
ITGB1-204ENST00000417122 SNAPC5O75971 98 aa11.88□□□□□ -0.51
ITGB1-204ENST00000417122 OR2C1O95371 312 aa11.88□□□□□ -0.51
ITGB1-204ENST00000417122 HLA-AP01891 365 aaKnown RBP11.88□□□□□ -0.51
ITGB1-204ENST00000417122 ARL3P36405 182 aa11.88□□□□□ -0.51
ITGB1-204ENST00000417122 LAX1Q8IWV1 398 aa11.88□□□□□ -0.51
ITGB1-204ENST00000417122 Q8N1Y9 231 aa11.88□□□□□ -0.51
ITGB1-204ENST00000417122 OR1L8Q8NGR8 309 aa11.88□□□□□ -0.51
ITGB1-204ENST00000417122 CXorf58Q96LI9 332 aa11.88□□□□□ -0.51
ITGB1-204ENST00000417122 NDUFA4L2Q9NRX3 87 aa11.88□□□□□ -0.51
ITGB1-204ENST00000417122 OR51B2Q9Y5P1 312 aa11.88□□□□□ -0.51
ITGB1-204ENST00000417122 U3KQK5 164 aa11.88□□□□□ -0.51
ITGB1-204ENST00000417122 COL7A1Q02388 2944 aa11.88□□□□□ -0.51
ITGB1-204ENST00000417122 TRBV7-1A0A0A6YYK4 115 aa11.87□□□□□ -0.51
ITGB1-204ENST00000417122 MFSD2BA6NFX1 497 aa11.87□□□□□ -0.51
ITGB1-204ENST00000417122 CYB5BO43169 146 aa11.87□□□□□ -0.51
ITGB1-204ENST00000417122 SERPINE2P07093 398 aa11.87□□□□□ -0.51
ITGB1-204ENST00000417122 FRMD6-AS1P0C7T7 363 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms