RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 EHFQ9NZC4 300 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 C2orf70A6NJV1 201 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 UPK2O00526 184 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 LYL1P12980 280 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 MYOD1P15172 320 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 ARL3P36405 182 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 OR2B8PP59922 312 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 HAGHQ16775 308 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 DEFB114Q30KQ6 69 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 FAM106AQ4KMX7 169 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 TMEM69Q5SWH9 247 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 AADACL3Q5VUY0 350 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 CLEC19AQ6UXS0 136 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 OR51H1Q8NH63 302 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 SRSF8Q9BRL6 282 aaKnown RBP13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 COMMD5Q9GZQ3 224 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 TECRQ9NZ01 308 aaKnown RBP13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 ANAPC10Q9UM13 185 aa13.31□□□□□ -0.28
PDLIM2-208ENST00000416159 IGLV11-55A0A075B6I3 123 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 CGB1A6NKQ9 187 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 ZNF785A8K8V0 405 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 IGHV3-23P01764 117 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 HLA-AP01891 365 aaKnown RBP13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 FGF2P09038 288 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 FOLR2P14207 255 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 GNRHRP30968 328 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 TAS2R46P59540 309 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 TAS2R20P59543 309 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 LSM3P62310 102 aaKnown RBP13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 SAMD12Q8N8I0 201 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 DMBX1Q8NFW5 382 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 TSPAN14Q8NG11 270 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 CXorf58Q96LI9 332 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 CCDC140Q96MF4 163 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 ZNF2Q9BSG1 426 aaPredicted RBP13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 SLC2A8Q9NY64 477 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 COMMD9Q9P000 198 aa13.3□□□□□ -0.28
PDLIM2-208ENST00000416159 TRBV7-1A0A0A6YYK4 115 aa13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 TRAV3A0A0B4J244 114 aa13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 S1PR2O95136 353 aa13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 TNFAIP8O95379 198 aa13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 REG1AP05451 166 aa13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 NAT1P18440 290 aa13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 RFX2P48378 723 aa13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 CD81P60033 236 aa13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 THOC7Q6I9Y2 204 aaKnown RBP13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 OR5H2Q8NGV7 314 aa13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 MOB3AQ96BX8 217 aa13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 NEURL2Q9BR09 285 aa13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 PALMDQ9NP74 551 aa13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 TMEM140Q9NV12 185 aa13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 S4R3C0 116 aa13.29□□□□□ -0.28
PDLIM2-208ENST00000416159 IGLC7A0M8Q6 106 aa13.28□□□□□ -0.28
PDLIM2-208ENST00000416159 PGLYRP1O75594 196 aaPredicted RBP13.28□□□□□ -0.28
PDLIM2-208ENST00000416159 TPPPO94811 219 aa13.28□□□□□ -0.28
PDLIM2-208ENST00000416159 PMP2P02689 132 aa13.28□□□□□ -0.28
PDLIM2-208ENST00000416159 IFNA6P05013 189 aa13.28□□□□□ -0.28
PDLIM2-208ENST00000416159 PRSS3P35030 304 aa13.28□□□□□ -0.28
PDLIM2-208ENST00000416159 ERVK-16P61578 105 aa13.28□□□□□ -0.28
PDLIM2-208ENST00000416159 ISOC1Q96CN7 298 aa13.28□□□□□ -0.28
PDLIM2-208ENST00000416159 EDA2RQ9HAV5 297 aa13.28□□□□□ -0.28
PDLIM2-208ENST00000416159 ZC4H2Q9NQZ6 224 aa13.28□□□□□ -0.28
PDLIM2-208ENST00000416159 THYN1Q9P016 225 aa13.28□□□□□ -0.28
PDLIM2-208ENST00000416159 RYR3Q15413 4870 aa13.27□□□□□ -0.28
PDLIM2-208ENST00000416159 ZNF320A2RRD8 509 aa13.27□□□□□ -0.29
PDLIM2-208ENST00000416159 CYB5BO43169 146 aa13.27□□□□□ -0.29
PDLIM2-208ENST00000416159 CLEC3BP05452 202 aa13.27□□□□□ -0.29
PDLIM2-208ENST00000416159 CBLN1P23435 193 aa13.27□□□□□ -0.29
PDLIM2-208ENST00000416159 F2RP25116 425 aa13.27□□□□□ -0.29
PDLIM2-208ENST00000416159 GUCA2BQ16661 112 aa13.27□□□□□ -0.29
PDLIM2-208ENST00000416159 LINC00322Q6ZN03 302 aaPredicted RBP13.27□□□□□ -0.29
PDLIM2-208ENST00000416159 CMTM1Q8IZ96 169 aa13.27□□□□□ -0.29
PDLIM2-208ENST00000416159 OR6F1Q8NGZ6 308 aa13.27□□□□□ -0.29
PDLIM2-208ENST00000416159 SLC25A46Q96AG3 418 aa13.27□□□□□ -0.29
PDLIM2-208ENST00000416159 CMTM3Q96MX0 182 aa13.27□□□□□ -0.29
PDLIM2-208ENST00000416159 QTRT1Q9BXR0 403 aaKnown RBP13.27□□□□□ -0.29
PDLIM2-208ENST00000416159 PLEKHA3Q9HB20 300 aa13.27□□□□□ -0.29
PDLIM2-208ENST00000416159 MFSD2BA6NFX1 497 aa13.26□□□□□ -0.29
PDLIM2-208ENST00000416159 A8MWP6 167 aa13.26□□□□□ -0.29
PDLIM2-208ENST00000416159 CD7P09564 240 aa13.26□□□□□ -0.29
PDLIM2-208ENST00000416159 TRAPPC2P0DI81 140 aa13.26□□□□□ -0.29
PDLIM2-208ENST00000416159 TRAPPC2BP0DI82 140 aa13.26□□□□□ -0.29
PDLIM2-208ENST00000416159 EDN2P20800 178 aa13.26□□□□□ -0.29
PDLIM2-208ENST00000416159 LPAR6P43657 344 aa13.26□□□□□ -0.29
PDLIM2-208ENST00000416159 HSD17B13Q7Z5P4 300 aaPredicted RBP13.26□□□□□ -0.29
PDLIM2-208ENST00000416159 CADM3Q8N126 398 aa13.26□□□□□ -0.29
PDLIM2-208ENST00000416159 OR1L8Q8NGR8 309 aa13.26□□□□□ -0.29
PDLIM2-208ENST00000416159 DGCR14Q96DF8 476 aaKnown RBP13.26□□□□□ -0.29
PDLIM2-208ENST00000416159 CEPT1Q9Y6K0 416 aa13.26□□□□□ -0.29
PDLIM2-208ENST00000416159 TEX50A0A1B0GTY4 177 aa13.25□□□□□ -0.29
PDLIM2-208ENST00000416159 SMIM31A0A1B0GVY4 71 aa13.25□□□□□ -0.29
PDLIM2-208ENST00000416159 MARCH11A6NNE9 402 aa13.25□□□□□ -0.29
PDLIM2-208ENST00000416159 GPR31O00270 319 aa13.25□□□□□ -0.29
PDLIM2-208ENST00000416159 RLN1P04808 185 aa13.25□□□□□ -0.29
PDLIM2-208ENST00000416159 RPA2P15927 270 aa13.25□□□□□ -0.29
PDLIM2-208ENST00000416159 PTBP1P26599 531 aaKnown RBP eCLIP13.25□□□□□ -0.29
PDLIM2-208ENST00000416159 ZNF57Q68EA5 555 aaPredicted RBP13.25□□□□□ -0.29
PDLIM2-208ENST00000416159 LYSMD2Q8IV50 215 aa13.25□□□□□ -0.29
PDLIM2-208ENST00000416159 ZNF502Q8TBZ5 544 aa13.25□□□□□ -0.29
PDLIM2-208ENST00000416159 TMEM213A2RRL7 107 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms