RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 VAX1Q5SQQ9 334 aa12.03□□□□□ -0.48
MCF2L-211ENST00000413354 OR9G4Q8NGQ1 327 aa12.03□□□□□ -0.48
MCF2L-211ENST00000413354 RAB2BQ8WUD1 216 aa12.03□□□□□ -0.48
MCF2L-211ENST00000413354 DGCR14Q96DF8 476 aaKnown RBP12.03□□□□□ -0.48
MCF2L-211ENST00000413354 BCL7BQ9BQE9 202 aa12.03□□□□□ -0.48
MCF2L-211ENST00000413354 FAM212BQ9NTI7 297 aaPredicted RBP12.03□□□□□ -0.48
MCF2L-211ENST00000413354 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.02□□□□□ -0.49
MCF2L-211ENST00000413354 MARCH11A6NNE9 402 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 NOL3O60936 208 aaKnown RBP12.02□□□□□ -0.49
MCF2L-211ENST00000413354 RBMXL2O75526 392 aaKnown RBP12.02□□□□□ -0.49
MCF2L-211ENST00000413354 TRBV12-3P01733 135 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 IFNA6P05013 189 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 GP9P14770 177 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 SPNP16150 400 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 CTRB1P17538 263 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 TBPP20226 339 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 UCP3P55916 312 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 SYNJ2BPP57105 145 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 OR2B8PP59922 312 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 CTRB2Q6GPI1 263 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 CLVS1Q8IUQ0 354 aaPredicted RBP12.02□□□□□ -0.49
MCF2L-211ENST00000413354 SLC38A6Q8IZM9 456 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 CADM3Q8N126 398 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 PEMTQ9UBM1 199 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 FBXL7Q9UJT9 491 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 SMAD5-AS1Q9Y6J3 95 aa12.02□□□□□ -0.49
MCF2L-211ENST00000413354 A0A1B0GW64 132 aa12.01□□□□□ -0.49
MCF2L-211ENST00000413354 E7EUB6 86 aa12.01□□□□□ -0.49
MCF2L-211ENST00000413354 RGS5O15539 181 aa12.01□□□□□ -0.49
MCF2L-211ENST00000413354 CYB5BO43169 146 aa12.01□□□□□ -0.49
MCF2L-211ENST00000413354 IGLV1-51P01701 117 aa12.01□□□□□ -0.49
MCF2L-211ENST00000413354 NHLRC4P0CG21 123 aaPredicted RBP12.01□□□□□ -0.49
MCF2L-211ENST00000413354 DEFA4P12838 97 aa12.01□□□□□ -0.49
MCF2L-211ENST00000413354 AREGP15514 252 aa12.01□□□□□ -0.49
MCF2L-211ENST00000413354 PHLDA2Q53GA4 152 aa12.01□□□□□ -0.49
MCF2L-211ENST00000413354 RNASE10Q5GAN6 216 aaKnown RBP12.01□□□□□ -0.49
MCF2L-211ENST00000413354 HSD17B13Q7Z5P4 300 aaPredicted RBP12.01□□□□□ -0.49
MCF2L-211ENST00000413354 QTRT1Q9BXR0 403 aaKnown RBP12.01□□□□□ -0.49
MCF2L-211ENST00000413354 BMPR1BO00238 502 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 SNAPC5O75971 98 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 LPAR6P43657 344 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 TMBIM6P55061 237 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 MRPS10P82664 201 aaKnown RBP12□□□□□ -0.49
MCF2L-211ENST00000413354 SPCS2Q15005 226 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 KLK9Q2XQG4 91 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 RNASE12Q5GAN4 147 aaKnown RBP12□□□□□ -0.49
MCF2L-211ENST00000413354 ARRDC1Q8N5I2 433 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 OR52I2Q8NH67 350 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 FCAMRQ8WWV6 532 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 EEF1AKMT3Q96AZ1 226 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 TSC22D3Q99576 134 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 SIGLEC8Q9NYZ4 499 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 CCDC59Q9P031 241 aaKnown RBP12□□□□□ -0.49
MCF2L-211ENST00000413354 RABL2AQ9UBK7 228 aaPredicted RBP12□□□□□ -0.49
MCF2L-211ENST00000413354 MTFP1Q9UDX5 166 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 KLK9Q9UKQ9 250 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 RABL2BQ9UNT1 228 aa12□□□□□ -0.49
MCF2L-211ENST00000413354 TRAV3A0A0B4J244 114 aa11.99□□□□□ -0.49
MCF2L-211ENST00000413354 H0Y980 276 aa11.99□□□□□ -0.49
MCF2L-211ENST00000413354 M0QYG6 137 aa11.99□□□□□ -0.49
MCF2L-211ENST00000413354 MYOD1P15172 320 aa11.99□□□□□ -0.49
MCF2L-211ENST00000413354 SSBP1Q04837 148 aaKnown RBP11.99□□□□□ -0.49
MCF2L-211ENST00000413354 OR1L8Q8NGR8 309 aa11.99□□□□□ -0.49
MCF2L-211ENST00000413354 ZNF486Q96H40 463 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-211ENST00000413354 CXorf58Q96LI9 332 aa11.99□□□□□ -0.49
MCF2L-211ENST00000413354 FANCD2OSQ96PS1 177 aa11.99□□□□□ -0.49
MCF2L-211ENST00000413354 FKBP11Q9NYL4 201 aa11.99□□□□□ -0.49
MCF2L-211ENST00000413354 THYN1Q9P016 225 aa11.99□□□□□ -0.49
MCF2L-211ENST00000413354 KLK11Q9UBX7 282 aa11.99□□□□□ -0.49
MCF2L-211ENST00000413354 DNAH9Q9NYC9 4486 aa11.99□□□□□ -0.49
MCF2L-211ENST00000413354 IGLV11-55A0A075B6I3 123 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 IGLC7A0M8Q6 106 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 CGB1A6NKQ9 187 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 GABARAPH6UMI1 98 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 GGCTO75223 188 aaKnown RBP11.98□□□□□ -0.49
MCF2L-211ENST00000413354 KRASP01116 189 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 REG1AP05451 166 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 TRAPPC2P0DI81 140 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 TRAPPC2BP0DI82 140 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 PGAM2P15259 253 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 RPA2P15927 270 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 G6PCP35575 357 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 RPL5P46777 297 aaKnown RBP11.98□□□□□ -0.49
MCF2L-211ENST00000413354 TAS2R19P59542 299 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 ZNF585BQ52M93 769 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 C11orf87Q6NUJ2 197 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 C19orf35Q6ZS72 473 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 TBC1D26Q86UD7 250 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 LAX1Q8IWV1 398 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 PRNDQ9UKY0 176 aa11.98□□□□□ -0.49
MCF2L-211ENST00000413354 TRBV7-1A0A0A6YYK4 115 aa11.97□□□□□ -0.49
MCF2L-211ENST00000413354 NDUFB8O95169 186 aa11.97□□□□□ -0.49
MCF2L-211ENST00000413354 CD3DP04234 171 aa11.97□□□□□ -0.49
MCF2L-211ENST00000413354 CSN3P07498 182 aa11.97□□□□□ -0.49
MCF2L-211ENST00000413354 PTBP1P26599 531 aaKnown RBP eCLIP11.97□□□□□ -0.49
MCF2L-211ENST00000413354 RND3P61587 244 aa11.97□□□□□ -0.49
MCF2L-211ENST00000413354 LCN12Q6JVE5 192 aa11.97□□□□□ -0.49
MCF2L-211ENST00000413354 IL34Q6ZMJ4 242 aa11.97□□□□□ -0.49
MCF2L-211ENST00000413354 HAPLN4Q86UW8 402 aa11.97□□□□□ -0.49
MCF2L-211ENST00000413354 Q8N402 240 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms