RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 BORCS7Q96B45 105 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 PRELID3AQ96N28 172 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 PRADC1Q9BSG0 188 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 A0A087WV48 116 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 FAM181BA6NEQ2 426 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 CRXO43186 299 aaPredicted RBP4.35□□□□□ -1.71
HERC4-205ENST00000412272 PHF1O43189 567 aaPredicted RBP4.35□□□□□ -1.71
HERC4-205ENST00000412272 CLDN7O95471 211 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 GYPBP06028 91 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 CA3P07451 260 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 RPL35AP18077 110 aaKnown RBP4.35□□□□□ -1.71
HERC4-205ENST00000412272 G6PCP35575 357 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 SLC35B1P78383 322 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 TMEM187Q14656 261 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 C4orf26Q17RF5 130 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 Q5XG85 94 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 ATP6V0E2Q8NHE4 81 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 RAXQ9Y2V3 346 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 HEBP2Q9Y5Z4 205 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 TRAV27A0A087WT01 109 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.35□□□□□ -1.71
HERC4-205ENST00000412272 NPFFO15130 113 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 GYPAP02724 150 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 RBP4P02753 201 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 CT62P0C5K7 136 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 IGLC6P0CF74 106 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 MALP21145 153 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 RNPS1Q15287 305 aaKnown RBP4.35□□□□□ -1.71
HERC4-205ENST00000412272 ZNF141Q15928 474 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 NFE4Q86UQ8 179 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 GVQW1Q8N7I0 195 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 C8orf31Q8N9H6 132 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 OR1L1Q8NH94 360 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 ZDHHC16Q969W1 377 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 RAB37Q96AX2 223 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 SFXN3Q9BWM7 321 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 ELOVL3Q9HB03 270 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 IGHV3-7P01780 117 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 SLC25A5P05141 298 aaKnown RBP4.35□□□□□ -1.71
HERC4-205ENST00000412272 OR9G9P0C7N8 305 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 GABRG2P18507 467 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 RBMXP38159 391 aaKnown RBP4.35□□□□□ -1.71
HERC4-205ENST00000412272 NCBP2P52298 156 aaKnown RBP eCLIP4.35□□□□□ -1.717e-8■■■■■ 31.4
HERC4-205ENST00000412272 RBM11P57052 281 aaKnown RBP4.35□□□□□ -1.71
HERC4-205ENST00000412272 ZNF672Q499Z4 452 aaPredicted RBP4.35□□□□□ -1.71
HERC4-205ENST00000412272 OR10AC1Q8NH08 325 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 GTSF1Q8WW33 167 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 MRPL32Q9BYC8 188 aaKnown RBP4.35□□□□□ -1.71
HERC4-205ENST00000412272 RPRMQ9NS64 109 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 HILPDAQ9Y5L2 63 aa4.35□□□□□ -1.71
HERC4-205ENST00000412272 NEURL1O76050 574 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 NBL1P41271 181 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 UBE2G1P62253 170 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 MLF2Q15773 248 aaPredicted RBP4.34□□□□□ -1.71
HERC4-205ENST00000412272 MS4A18Q3C1V0 323 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 Q6Q795 121 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 PPP1R27Q86WC6 154 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 ODF3L1Q8IXM7 274 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 TMEM86BQ8N661 226 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 LSM10Q969L4 123 aaKnown RBP4.34□□□□□ -1.71
HERC4-205ENST00000412272 OR2H1Q9GZK4 316 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 OBSL1O75147 1896 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 TM4SF5O14894 197 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 CD38P28907 300 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 IER3P46695 156 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 EMP1P54849 157 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 DLX6P56179 175 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 DPTQ07507 201 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 EDDM3AQ14507 147 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 IER5LQ5T953 404 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 MFSD12Q6NUT3 480 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 TEPPQ6URK8 271 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 HRCT1Q6UXD1 115 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 KIR3DL3Q8N743 410 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 VN1R2Q8NFZ6 395 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.34□□□□□ -1.71
HERC4-205ENST00000412272 OVCA2Q8WZ82 227 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 ZNF689Q96CS4 500 aaPredicted RBP4.34□□□□□ -1.71
HERC4-205ENST00000412272 C10orf35Q96D05 121 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 SPRY4Q9C004 299 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 DHDHQ9UQ10 334 aa4.34□□□□□ -1.71
HERC4-205ENST00000412272 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.34□□□□□ -1.71
HERC4-205ENST00000412272 LOC102723996A0A087X1L8 192 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 ZNF785A8K8V0 405 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 NDUFS4O43181 175 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 CRLF1O75462 422 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 EML2O95834 649 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 COX8AP10176 69 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 FGF6P10767 208 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 NMUP48645 174 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 SPINT3P49223 89 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 C1orf140Q5VVS0 124 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 FAM214BQ7L5A3 538 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 DCAF4L2Q8NA75 395 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 OTOSQ8NHW6 89 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 KLK14Q9P0G3 267 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 OR2W1Q9Y3N9 320 aa4.34□□□□□ -1.72
HERC4-205ENST00000412272 YTHDF2Q9Y5A9 579 aaKnown RBP4.34□□□□□ -1.72
HERC4-205ENST00000412272 APOMO95445 188 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms