RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 HOXB1P14653 301 aaPredicted RBP3.92□□□□□ -1.78
PTPN13-202ENST00000411767 CR1LQ2VPA4 569 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 RFLNAQ6ZTI6 216 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 MARCH3Q86UD3 253 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 RNF138Q8WVD3 245 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 FGF20Q9NP95 211 aaPredicted RBP3.92□□□□□ -1.78
PTPN13-202ENST00000411767 NEXMIFQ5QGS0 1516 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 GRIFINA4D1Z8 144 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 A8MWP6 167 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 NPIPB11E5RHQ5 1161 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 TCTN3Q6NUS6 607 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 ZNF740Q8NDX6 193 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 CNRIP1Q96F85 164 aaPredicted RBP3.92□□□□□ -1.78
PTPN13-202ENST00000411767 UGGT1Q9NYU2 1555 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 TRBV5-7A0A0A0MS05 114 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 SHISA7A6NL88 538 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 RHODO00212 210 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 SPRY1O43609 319 aaPredicted RBP3.92□□□□□ -1.78
PTPN13-202ENST00000411767 FABP5Q01469 135 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 ADAMTSL5Q6ZMM2 481 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 ORMDL1Q9P0S3 153 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 TRGV5A0A0B4J1U4 118 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 IZUMO1RA6ND01 250 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 EMDP50402 254 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 COL10A1Q03692 680 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 SPRYD7Q5W111 196 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 C17orf99Q6UX52 265 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 CADM3Q8N126 398 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 IL17FQ96PD4 163 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 HAPLN2Q9GZV7 340 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 RIMBP3CA6NJZ7 1639 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 RIMBP3BA6NNM3 1639 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 RIMBP3Q9UFD9 1639 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 TRBV24-1A0A075B6N3 115 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 TRAV12-1A0A0B4J245 112 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 CELA2AP08217 269 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 LMO2P25791 158 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 PDE6HQ13956 83 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 PRIMA1Q86XR5 153 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 CLEC7AQ9BXN2 247 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 TMEM222Q9H0R3 208 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 CMC2Q9NRP2 79 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 LINC00527Q9UJ94 153 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 Q9Y3F1 56 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 LY96Q9Y6Y9 160 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 TMEM131LA2VDJ0 1609 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 CLTCQ00610 1675 aaKnown RBP3.91□□□□□ -1.78
PTPN13-202ENST00000411767 A0A0G2JLL6 359 aaPredicted RBP3.91□□□□□ -1.78
PTPN13-202ENST00000411767 PYCARD-AS1I3L0S3 204 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 FXYD7P58549 80 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 DEFB109BQ30KR1 87 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 PRRT2Q7Z6L0 340 aaPredicted RBP3.91□□□□□ -1.78
PTPN13-202ENST00000411767 TRPT1Q86TN4 253 aaKnown RBP3.91□□□□□ -1.78
PTPN13-202ENST00000411767 DYNAPQ8N1N2 210 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 FOXB1Q99853 325 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 A0A1B0GTI1 187 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 IGHV3-9P01782 118 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 DCAF12L1Q5VU92 463 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 BCDIN3DQ7Z5W3 292 aaKnown RBP3.91□□□□□ -1.78
PTPN13-202ENST00000411767 RNF114Q9Y508 228 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 FXYD1O00168 92 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 MOSP00540 346 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 IL15RAQ13261 267 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 NEURL3Q96EH8 262 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 NEU3Q9UQ49 428 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 KIF13AQ9H1H9 1805 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 IGHV2-70DA0A0C4DH43 119 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 MED19A0JLT2 244 aaPredicted RBP3.91□□□□□ -1.78
PTPN13-202ENST00000411767 CD7P09564 240 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 CRYBA4P53673 196 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 LINC00303Q3SY05 128 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 TMEM256Q8N2U0 113 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 C1orf159Q96HA4 380 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 LYZL4Q96KX0 146 aa3.91□□□□□ -1.78
PTPN13-202ENST00000411767 IGHV1-24A0A0C4DH33 117 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 ZNF205O95201 554 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 CTSBP07858 339 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 WNT2P09544 360 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 NREPQ16612 68 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 LY6G5BQ8NDX9 201 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 DUOX1Q9NRD9 1551 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 SP6Q3SY56 376 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 C1orf194Q5T5A4 169 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 VSIG2Q96IQ7 327 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 EAF1Q96JC9 268 aaPredicted RBP3.9□□□□□ -1.78
PTPN13-202ENST00000411767 GP6Q9HCN6 339 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 MRPS18AQ9NVS2 196 aaKnown RBP3.9□□□□□ -1.78
PTPN13-202ENST00000411767 CALYQ9NYX4 217 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 IDI2-AS1Q9NZ38 188 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 ANKRD12Q6UB98 2062 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 H0YGG7 62 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 CACNG4Q9UBN1 327 aa3.9□□□□□ -1.78
PTPN13-202ENST00000411767 TMEM229AB2RXF0 380 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 NDUFC1O43677 76 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 HOXD4P09016 255 aaPredicted RBP3.9□□□□□ -1.79
PTPN13-202ENST00000411767 PDE6GP18545 87 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 ZNF138P52744 262 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 PAX8Q06710 450 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 KISS1Q15726 138 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 TMEM99Q8N816 258 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms