RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 EWSR1Q01844 656 aaKnown RBP eCLIP12.44□□□□□ -0.42
MRPL55-220ENST00000411464 CNIH2Q6PI25 160 aa12.44□□□□□ -0.42
MRPL55-220ENST00000411464 UNQ9165/PRO28630Q6UXU0 137 aa12.44□□□□□ -0.42
MRPL55-220ENST00000411464 MFSD4AQ8N468 514 aa12.44□□□□□ -0.42
MRPL55-220ENST00000411464 TMEM217Q8N7C4 229 aa12.44□□□□□ -0.42
MRPL55-220ENST00000411464 AIFM2Q9BRQ8 373 aa12.44□□□□□ -0.42
MRPL55-220ENST00000411464 TAS2R8Q9NYW2 309 aa12.44□□□□□ -0.42
MRPL55-220ENST00000411464 ALMS1Q8TCU4 4167 aa12.44□□□□□ -0.42
MRPL55-220ENST00000411464 IGLV11-55A0A075B6I3 123 aa12.43□□□□□ -0.42
MRPL55-220ENST00000411464 MFSD2BA6NFX1 497 aa12.43□□□□□ -0.42
MRPL55-220ENST00000411464 MYOD1P15172 320 aa12.43□□□□□ -0.42
MRPL55-220ENST00000411464 HLA-GP17693 338 aa12.43□□□□□ -0.42
MRPL55-220ENST00000411464 RAB3BP20337 219 aa12.43□□□□□ -0.42
MRPL55-220ENST00000411464 ELLP55199 621 aaPredicted RBP12.43□□□□□ -0.42
MRPL55-220ENST00000411464 BRWD1-AS2P59051 145 aa12.43□□□□□ -0.42
MRPL55-220ENST00000411464 DEFB135Q30KP9 77 aa12.43□□□□□ -0.42
MRPL55-220ENST00000411464 HACD4Q5VWC8 232 aa12.43□□□□□ -0.42
MRPL55-220ENST00000411464 PLET1Q6UQ28 207 aa12.43□□□□□ -0.42
MRPL55-220ENST00000411464 ZNF66Q6ZN08 573 aa12.43□□□□□ -0.42
MRPL55-220ENST00000411464 STPG3Q8N7X2 389 aa12.43□□□□□ -0.42
MRPL55-220ENST00000411464 OR4A5Q8NH83 315 aa12.43□□□□□ -0.42
MRPL55-220ENST00000411464 SPAG8Q99932 426 aaPredicted RBP12.43□□□□□ -0.42
MRPL55-220ENST00000411464 C5orf66Q9H5L9 145 aa12.43□□□□□ -0.42
MRPL55-220ENST00000411464 HRASLSQ9HDD0 168 aa12.43□□□□□ -0.42
MRPL55-220ENST00000411464 IGHV3-35A0A0C4DH35 117 aa12.42□□□□□ -0.42
MRPL55-220ENST00000411464 ATF4P18848 351 aaPredicted RBP12.42□□□□□ -0.42
MRPL55-220ENST00000411464 GPR183P32249 361 aa12.42□□□□□ -0.42
MRPL55-220ENST00000411464 PRSS48Q7RTY5 328 aa12.42□□□□□ -0.42
MRPL55-220ENST00000411464 ZNF502Q8TBZ5 544 aa12.42□□□□□ -0.42
MRPL55-220ENST00000411464 THYN1Q9P016 225 aa12.42□□□□□ -0.42
MRPL55-220ENST00000411464 UBQLN2Q9UHD9 624 aa12.42□□□□□ -0.42
MRPL55-220ENST00000411464 EIF4EBP1Q13541 118 aaPredicted RBP12.41□□□□□ -0.42
MRPL55-220ENST00000411464 LAMTOR1Q6IAA8 161 aa12.41□□□□□ -0.42
MRPL55-220ENST00000411464 RPP25LQ8N5L8 163 aaKnown RBP12.41□□□□□ -0.42
MRPL55-220ENST00000411464 YTHDF1Q9BYJ9 559 aaKnown RBP12.41□□□□□ -0.42
MRPL55-220ENST00000411464 BET1LQ9NYM9 111 aa12.41□□□□□ -0.42
MRPL55-220ENST00000411464 ANXA10Q9UJ72 324 aa12.41□□□□□ -0.42
MRPL55-220ENST00000411464 BLOC1S6Q9UL45 172 aa12.41□□□□□ -0.42
MRPL55-220ENST00000411464 KIR2DL5BA0A0G2JN68 375 aa12.4□□□□□ -0.42
MRPL55-220ENST00000411464 KIR2DL5BA0A0G2JPC4 375 aa12.4□□□□□ -0.42
MRPL55-220ENST00000411464 TSPAN4O14817 238 aa12.4□□□□□ -0.42
MRPL55-220ENST00000411464 PTBP1P26599 531 aaKnown RBP eCLIP12.4□□□□□ -0.42
MRPL55-220ENST00000411464 GNG2P59768 71 aa12.4□□□□□ -0.42
MRPL55-220ENST00000411464 OR2B8PP59922 312 aa12.4□□□□□ -0.42
MRPL55-220ENST00000411464 GABARAPL2P60520 117 aa12.4□□□□□ -0.42
MRPL55-220ENST00000411464 KIR2DL5AQ8N109 375 aa12.4□□□□□ -0.42
MRPL55-220ENST00000411464 KIR2DL5BQ8NHK3 375 aa12.4□□□□□ -0.42
MRPL55-220ENST00000411464 NUDCD2Q8WVJ2 157 aa12.4□□□□□ -0.42
MRPL55-220ENST00000411464 RNF183Q96D59 192 aa12.4□□□□□ -0.42
MRPL55-220ENST00000411464 GPHA2Q96T91 129 aa12.4□□□□□ -0.42
MRPL55-220ENST00000411464 TMEM235A6NFC5 223 aa12.39□□□□□ -0.43
MRPL55-220ENST00000411464 CGB1A6NKQ9 187 aa12.39□□□□□ -0.43
MRPL55-220ENST00000411464 CYB5BO43169 146 aa12.39□□□□□ -0.43
MRPL55-220ENST00000411464 TNFSF12O43508 249 aa12.39□□□□□ -0.43
MRPL55-220ENST00000411464 TIMM50Q3ZCQ8 353 aa12.39□□□□□ -0.43
MRPL55-220ENST00000411464 ZNF367Q7RTV3 350 aa12.39□□□□□ -0.43
MRPL55-220ENST00000411464 SPAG16Q8N0X2 631 aa12.39□□□□□ -0.43
MRPL55-220ENST00000411464 PHLDA1Q8WV24 401 aaPredicted RBP12.39□□□□□ -0.43
MRPL55-220ENST00000411464 ZNF436Q9C0F3 470 aaPredicted RBP12.39□□□□□ -0.43
MRPL55-220ENST00000411464 COMMD5Q9GZQ3 224 aa12.39□□□□□ -0.43
MRPL55-220ENST00000411464 TRDV1A0A1B0GX56 115 aa12.38□□□□□ -0.43
MRPL55-220ENST00000411464 IGLC7A0M8Q6 106 aa12.38□□□□□ -0.43
MRPL55-220ENST00000411464 TGOLN2O43493 480 aa12.38□□□□□ -0.43
MRPL55-220ENST00000411464 SCGNO76038 276 aa12.38□□□□□ -0.43
MRPL55-220ENST00000411464 RPA2P15927 270 aa12.38□□□□□ -0.43
MRPL55-220ENST00000411464 RPL35AP18077 110 aaKnown RBP12.38□□□□□ -0.43
MRPL55-220ENST00000411464 LGALS9CQ6DKI2 356 aa12.38□□□□□ -0.43
MRPL55-220ENST00000411464 NR2C2APQ86WQ0 139 aa12.38□□□□□ -0.43
MRPL55-220ENST00000411464 VN1R17PQ8TDU5 208 aa12.38□□□□□ -0.43
MRPL55-220ENST00000411464 SECTM1Q8WVN6 248 aa12.38□□□□□ -0.43
MRPL55-220ENST00000411464 TMEM190Q8WZ59 177 aa12.38□□□□□ -0.43
MRPL55-220ENST00000411464 SRSF8Q9BRL6 282 aaKnown RBP12.38□□□□□ -0.43
MRPL55-220ENST00000411464 DAZ1Q9NQZ3 744 aaKnown RBP12.38□□□□□ -0.43
MRPL55-220ENST00000411464 CCL28Q9NRJ3 127 aa12.38□□□□□ -0.43
MRPL55-220ENST00000411464 NDUFB11Q9NX14 153 aa12.38□□□□□ -0.43
MRPL55-220ENST00000411464 SMIM30A4D0T7 59 aa12.37□□□□□ -0.43
MRPL55-220ENST00000411464 OR2T8A6NH00 312 aa12.37□□□□□ -0.43
MRPL55-220ENST00000411464 OR4C46A6NHA9 309 aa12.37□□□□□ -0.43
MRPL55-220ENST00000411464 RBFOX2O43251 390 aaKnown RBP eCLIP12.37□□□□□ -0.43
MRPL55-220ENST00000411464 DEDDO75618 318 aa12.37□□□□□ -0.43
MRPL55-220ENST00000411464 FCGR2CP31995 323 aa12.37□□□□□ -0.43
MRPL55-220ENST00000411464 TAS2R31P59538 309 aa12.37□□□□□ -0.43
MRPL55-220ENST00000411464 ARPC4P59998 168 aa12.37□□□□□ -0.43
MRPL55-220ENST00000411464 MSMO1Q15800 293 aa12.37□□□□□ -0.43
MRPL55-220ENST00000411464 TBCEQ15813 527 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-220ENST00000411464 KCTD21Q4G0X4 260 aa12.37□□□□□ -0.43
MRPL55-220ENST00000411464 C22orf42Q6IC83 251 aa12.37□□□□□ -0.43
MRPL55-220ENST00000411464 GALNT14Q96FL9 552 aa12.37□□□□□ -0.43
MRPL55-220ENST00000411464 C6orf62Q9GZU0 229 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-220ENST00000411464 SULT1C2O00338 296 aa12.36□□□□□ -0.43
MRPL55-220ENST00000411464 UPK2O00526 184 aa12.36□□□□□ -0.43
MRPL55-220ENST00000411464 SSX5O60225 188 aa12.36□□□□□ -0.43
MRPL55-220ENST00000411464 TNFAIP8O95379 198 aa12.36□□□□□ -0.43
MRPL55-220ENST00000411464 HPRT1P00492 218 aa12.36□□□□□ -0.43
MRPL55-220ENST00000411464 NQO2P16083 231 aa12.36□□□□□ -0.43
MRPL55-220ENST00000411464 CATR1Q13166 79 aa12.36□□□□□ -0.43
MRPL55-220ENST00000411464 ODF3L2Q3SX64 289 aa12.36□□□□□ -0.43
MRPL55-220ENST00000411464 ZBTB34Q8NCN2 500 aa12.36□□□□□ -0.43
MRPL55-220ENST00000411464 OR13F1Q8NGS4 319 aa12.36□□□□□ -0.43
MRPL55-220ENST00000411464 BSCL2Q96G97 398 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms