RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 PSMB6P28072 239 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 RCVRNP35243 200 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 ATP5G2Q06055 141 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 KLK9Q2XQG4 91 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 C15orf32Q32M92 178 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 PHLDA2Q53GA4 152 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 MZT2AQ6P582 158 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 OR9G4Q8NGQ1 327 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 OR52I2Q8NH67 350 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 OR4C12Q96R67 309 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 ASCL2Q99929 193 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 EXTL2Q9UBQ6 330 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 KLK9Q9UKQ9 250 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 IGLC7A0M8Q6 106 aa14.52□□□□□ -0.09
SF3A1-202ENST00000411423 PPP5D1E7EU14 171 aa14.52□□□□□ -0.09
SF3A1-202ENST00000411423 GPR31O00270 319 aa14.52□□□□□ -0.09
SF3A1-202ENST00000411423 CSN3P07498 182 aa14.52□□□□□ -0.09
SF3A1-202ENST00000411423 EDN2P20800 178 aa14.52□□□□□ -0.09
SF3A1-202ENST00000411423 F2RP25116 425 aa14.52□□□□□ -0.09
SF3A1-202ENST00000411423 LPAR6P43657 344 aa14.52□□□□□ -0.09
SF3A1-202ENST00000411423 ADAMTSL5Q6ZMM2 481 aa14.52□□□□□ -0.09
SF3A1-202ENST00000411423 SLC25A42Q86VD7 318 aa14.52□□□□□ -0.09
SF3A1-202ENST00000411423 NECAP1Q8NC96 275 aa14.52□□□□□ -0.09
SF3A1-202ENST00000411423 OR6Q1Q8NGQ2 317 aa14.52□□□□□ -0.09
SF3A1-202ENST00000411423 DGCR14Q96DF8 476 aaKnown RBP14.52□□□□□ -0.09
SF3A1-202ENST00000411423 CCDC140Q96MF4 163 aa14.52□□□□□ -0.09
SF3A1-202ENST00000411423 RSRP1Q9BUV0 290 aa14.52□□□□□ -0.09
SF3A1-202ENST00000411423 FBXL7Q9UJT9 491 aa14.52□□□□□ -0.09
SF3A1-202ENST00000411423 CTDSP2O14595 271 aa14.51□□□□□ -0.09
SF3A1-202ENST00000411423 HLA-AP01891 365 aaKnown RBP14.51□□□□□ -0.09
SF3A1-202ENST00000411423 VAX1Q5SQQ9 334 aa14.51□□□□□ -0.09
SF3A1-202ENST00000411423 CLVS1Q8IUQ0 354 aaPredicted RBP14.51□□□□□ -0.09
SF3A1-202ENST00000411423 LAX1Q8IWV1 398 aa14.51□□□□□ -0.09
SF3A1-202ENST00000411423 DMBX1Q8NFW5 382 aa14.51□□□□□ -0.09
SF3A1-202ENST00000411423 OR10W1Q8NGF6 305 aa14.51□□□□□ -0.09
SF3A1-202ENST00000411423 ELOVL1Q9BW60 279 aa14.51□□□□□ -0.09
SF3A1-202ENST00000411423 COMMD9Q9P000 198 aa14.51□□□□□ -0.09
SF3A1-202ENST00000411423 NSG2Q9Y328 171 aa14.51□□□□□ -0.09
SF3A1-202ENST00000411423 IGLV11-55A0A075B6I3 123 aa14.5□□□□□ -0.09
SF3A1-202ENST00000411423 MARCH11A6NNE9 402 aa14.5□□□□□ -0.09
SF3A1-202ENST00000411423 IGKV1-39P01597 117 aa14.5□□□□□ -0.09
SF3A1-202ENST00000411423 IGKV1D-39P04432 117 aa14.5□□□□□ -0.09
SF3A1-202ENST00000411423 G6PCP35575 357 aa14.5□□□□□ -0.09
SF3A1-202ENST00000411423 TSPAN5P62079 268 aa14.5□□□□□ -0.09
SF3A1-202ENST00000411423 DCTN2Q13561 401 aaKnown RBP14.5□□□□□ -0.09
SF3A1-202ENST00000411423 RPEL1Q2QD12 228 aa14.5□□□□□ -0.09
SF3A1-202ENST00000411423 OR4D10Q8NGI6 311 aa14.5□□□□□ -0.09
SF3A1-202ENST00000411423 CD300LFQ8TDQ1 290 aa14.5□□□□□ -0.09
SF3A1-202ENST00000411423 AP3S1Q92572 193 aa14.5□□□□□ -0.09
SF3A1-202ENST00000411423 SORL1Q92673 2214 aa14.5□□□□□ -0.09
SF3A1-202ENST00000411423 TEX50A0A1B0GTY4 177 aa14.49□□□□□ -0.09
SF3A1-202ENST00000411423 DPPA5A6NC42 116 aa14.49□□□□□ -0.09
SF3A1-202ENST00000411423 MFSD2BA6NFX1 497 aa14.49□□□□□ -0.09
SF3A1-202ENST00000411423 DBX1A6NMT0 343 aa14.49□□□□□ -0.09
SF3A1-202ENST00000411423 CD3DP04234 171 aa14.49□□□□□ -0.09
SF3A1-202ENST00000411423 TBC1D26Q86UD7 250 aa14.49□□□□□ -0.09
SF3A1-202ENST00000411423 LHFPL1Q86WI0 220 aa14.49□□□□□ -0.09
SF3A1-202ENST00000411423 Q8N1Y9 231 aa14.49□□□□□ -0.09
SF3A1-202ENST00000411423 BORCS5Q969J3 196 aa14.49□□□□□ -0.09
SF3A1-202ENST00000411423 AIFM2Q9BRQ8 373 aa14.49□□□□□ -0.09
SF3A1-202ENST00000411423 MTFP1Q9UDX5 166 aa14.49□□□□□ -0.09
SF3A1-202ENST00000411423 SMAD5-AS1Q9Y6J3 95 aa14.49□□□□□ -0.09
SF3A1-202ENST00000411423 IZUMO1RA6ND01 250 aa14.48□□□□□ -0.09
SF3A1-202ENST00000411423 KRASP01116 189 aa14.48□□□□□ -0.09
SF3A1-202ENST00000411423 MECP2P51608 486 aaKnown RBP14.48□□□□□ -0.09
SF3A1-202ENST00000411423 UCP3P55916 312 aa14.48□□□□□ -0.09
SF3A1-202ENST00000411423 WT1-ASQ06250 92 aa14.48□□□□□ -0.09
SF3A1-202ENST00000411423 CMTM1Q8IZ96 169 aa14.48□□□□□ -0.09
SF3A1-202ENST00000411423 DYNC2LI1Q8TCX1 351 aa14.48□□□□□ -0.09
SF3A1-202ENST00000411423 PI3P19957 117 aa14.47□□□□□ -0.09
SF3A1-202ENST00000411423 SBSPONQ8IVN8 264 aa14.47□□□□□ -0.09
SF3A1-202ENST00000411423 THAP7Q9BT49 309 aaPredicted RBP14.47□□□□□ -0.09
SF3A1-202ENST00000411423 COMMD5Q9GZQ3 224 aa14.47□□□□□ -0.09
SF3A1-202ENST00000411423 KMT2CQ8NEZ4 4911 aaKnown RBP14.47□□□□□ -0.09
SF3A1-202ENST00000411423 OR2C1O95371 312 aa14.46□□□□□ -0.09
SF3A1-202ENST00000411423 FGF2P09038 288 aa14.46□□□□□ -0.09
SF3A1-202ENST00000411423 MFAP2P55001 183 aa14.46□□□□□ -0.09
SF3A1-202ENST00000411423 ERVK-16P61578 105 aa14.46□□□□□ -0.09
SF3A1-202ENST00000411423 CLEC19AQ6UXS0 136 aa14.46□□□□□ -0.09
SF3A1-202ENST00000411423 MRGPRFQ96AM1 343 aa14.46□□□□□ -0.09
SF3A1-202ENST00000411423 QTRT1Q9BXR0 403 aaKnown RBP14.46□□□□□ -0.09
SF3A1-202ENST00000411423 NDUFA4L2Q9NRX3 87 aa14.46□□□□□ -0.09
SF3A1-202ENST00000411423 SIGLEC8Q9NYZ4 499 aa14.46□□□□□ -0.09
SF3A1-202ENST00000411423 CD74P04233 296 aa14.45□□□□□ -0.1
SF3A1-202ENST00000411423 FRMD6-AS1P0C7T7 363 aa14.45□□□□□ -0.1
SF3A1-202ENST00000411423 RNASE10Q5GAN6 216 aaKnown RBP14.45□□□□□ -0.1
SF3A1-202ENST00000411423 LPCAT3Q6P1A2 487 aa14.45□□□□□ -0.1
SF3A1-202ENST00000411423 SLC38A6Q8IZM9 456 aa14.45□□□□□ -0.1
SF3A1-202ENST00000411423 RAB2BQ8WUD1 216 aa14.45□□□□□ -0.1
SF3A1-202ENST00000411423 SEC22AQ96IW7 307 aa14.45□□□□□ -0.1
SF3A1-202ENST00000411423 ZC4H2Q9NQZ6 224 aa14.45□□□□□ -0.1
SF3A1-202ENST00000411423 SELENOKQ9Y6D0 94 aa14.45□□□□□ -0.1
SF3A1-202ENST00000411423 RGS5O15539 181 aa14.44□□□□□ -0.1
SF3A1-202ENST00000411423 TPPPO94811 219 aa14.44□□□□□ -0.1
SF3A1-202ENST00000411423 TRAPPC2P0DI81 140 aa14.44□□□□□ -0.1
SF3A1-202ENST00000411423 TRAPPC2BP0DI82 140 aa14.44□□□□□ -0.1
SF3A1-202ENST00000411423 DEFA4P12838 97 aa14.44□□□□□ -0.1
SF3A1-202ENST00000411423 TMBIM6P55061 237 aa14.44□□□□□ -0.1
SF3A1-202ENST00000411423 FAAP20Q6NZ36 180 aa14.44□□□□□ -0.1
SF3A1-202ENST00000411423 CADM3Q8N126 398 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms